GEISHA - A Chicken Embryo Gene Expression Database
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NPAS2
neuronal PAS domain protein 2

Gene
Official SymbolNPAS2
Official Full Nameneuronal PAS domain protein 2
CGNC ID12580
also known asMOP4, neuronal PAS domain-containing protein 2|bHLH-PAS clock protein|bHLH-PAS transcription factor MOP4|member of PAS protein 4|neuronal PAS2
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001030542
PolypeptideNP_001025713
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.235
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human4862ENSG00000170485MIM:603347
Mouse18143ENSMUSG00000026077All phenotypic alleles (2):Targeted, other(2) MGI:109232
Xenopus985238
Zebrafish352934ENSDARG00000016536ZDB-GENE-030408-3ZFIN:ZDB-GENE-030408-3
Gene Ontology
Molecular FunctionDNA binding, protein dimerization activity, sequence-specific DNA binding transcription factor activity, more...signal transducer activity
Biological Processrhythmic process, transcription, DNA-templated
Cellular Componentcytoplasm, nucleus, transcription factor complex
Links to other databases
Entrez Gene395433
Ensembl Gene
KEGGgga:395433
GEISHA IdNPAS2.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGACAGGGCAAAGAGGGCTTCG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGGGGACAGAGAGGTGGAGGGGCcDNA Template Length1900
Forward cDNA Template Probeshow
ATGGGTGNGGGGAAGATTTGGTGAGCTCCTGGATGACACTGAGGGTGTCCGGCTAGCACTGAGGATTGAGGCACCAATA
TCAAGCGCATTAAAGTGCTGTTCAGGATCCAAGCTGGAGCCACTGTCCTTTAGTGCTGAGGACACAACCTCTGAGGACA
CTTCTTCCAAGCCCATCTCCTGTCTCCTCTCCACCCGCACATCTGCATAACTTACCACCATGTGTGTGCACACGATGAA
CTCTGGCTTGGAGTTCCACTGGTGGTATGTGATATAGTAATGGGTCTGGAGCCAGATCCACTGCTGTCCTTTGGTCAGA
AACCGATAGCAGCACGACTTCCCCTTGCCAAACTGCATCAAGTGTTCATGGCACCTTGCAAGCAGCTCTAGGTCATCTA
TATGGTAATAGTCGTAGCCAGAAGTACCCAGCACTTCAAAAGGCAAGTATCCTATGATCGGCGGTGCTCTGTGATCCAG
GAATAAAAATTTCCATTCCAGACTGTGTCTTGACGTGAATTCCTCTAGAGGCTCTTCCACGATGCACATCTCCTTTAAA
AACTGAGGCGTTGCCAAACGAACAGTGGCGACAAAGCAGATCTGCTTTCCTGGTGATGCTCTGTAAGCCCTGGGAACAG
CCTCATCAAGNCCATTGCA
Commentsno expression detected stages 4-12
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 15
stage 16
Forebrain
Heart
Hindbrain
Midbrain
Neural Plate/Tube
Notochord
Spinal Cord
 
19-24
stage 21
stage 21
stage 24
Eye
Foregut
Head Mesenchyme
Heart
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Spinal Cord
Tail
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.235

Mouse

EmageMGI:109232
EurexpressMGI:109232
MGI GXDMGI:109232

Frog

Xenbase985238

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030408-3
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