GEISHA - A Chicken Embryo Gene Expression Database
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NEUROG1
neurogenin 1

Gene
Official SymbolNEUROG1
Official Full Nameneurogenin 1
CGNC ID49434
also known asath4c, neurogenin-1, ngn1, neurogenin-1|atonal-like protein 4c, neurogenin 1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204883
PolypeptideNP_990214
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.407
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human4762ENSG00000181965MIM:601726
Mouse18014ENSMUSG00000048904All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:107754
Xenopus100144651491451
Zebrafish30239ENSDARG00000056130ZDB-GENE-990415-174ZFIN:ZDB-GENE-990415-174
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395699
Ensembl Gene
KEGGgga:395699

Entry 1

GEISHA IdNgn-1.Chesnutt.2004Data SourcePublication
Complete cDNA Template Probeshow
GGCACGAGCCGCTTTCTCCTCTATTTATTTCTAAACCGTTATTGCTTAACCGCAGCCCCGGGAGTGCCTTTCCATGATG
CCCGCGGAGGCGGCGAGCAGCGGCGGCGTTTCGGAGCCGCCCGGAGCTCCGCGGGAGCGGCGGAGGAGACGCGGCCGTG
CGCGGGCGCGGACCGAGGCTTTGCTGCACACCCTTAAACGGAGCCGCCGGGTGAAAGCCAACGACCGGGAGCGGAACCG
CATGCACCACCTCAACGCCGCGCTGGATGAGCTCCGCAGCGTCCTGCCGACCTTCCCCGACGACACCAAACTCACCAAA
ATCGAAACCCTGCGCTTCGCTTACAACTACATCTGGGCCCTCTCCGAGACCCTTCGTTTGGCCGAGCAGTGCCTCCCTC
CTCCCCCCGCCTTCCGCGGGCCCCCCGCGCCCCCAAGCCCCGGCAGCGACGCCGGTTCGTGGCTGTCCAGCGGTTCCCC
GGCCGCCCCCTCGCTCTGCGCCTCCGCCTCCGGCCCCAGCAGCCCGGCCACCTCCGAGGACTGCGGCTACGTCCCCTCG
GACGCCCTGCGGGCCTTCCGCGGGCTGCCCCCCGCCGCCCCGGGCGCTCCCTGCCGCTAGCCCTGCCCGTGCGTGTCTC
CGTCCCCCCCCACCTTCTCCGTATCCCGTTGCACTTTTCAGCCCCTCCCGCCCCCCAGCCCCTCTCTCCGGGGTGCCCT
TTCCCTTCGCCCCCCCGCCTCGTTTTCCATACGACTTGGAAAACCCGGCAAAGAAAAGCGACAGATTTGCTGCCGCAGA
GGAGGTGAAAAGTCAATTTTACAATTTGTAGTTTTCCGGTGAAGAAAAACGAGCATGAAAATTTGGTTTGAACGCCCTG
ACAATGCGATGAAAAGGCTTAGGGGGCCGATGCGGCCCGGGGCGCAGCACGGGGCTCAGCGCGCTGCCGGCCCCCCTCC
CTCACAGTTCCTAACCCCCCCGCGCCCGGGGCGGTTCAGCCCCTCCCGGGGGTCCCAGCACCGCGCCCGATGGGACCCT
CACCCGACGGCCTCATGCATTATAGATGCTGACCCCCGGCGAGGCGGTCCTGCTTCAGAGCGGGAGCACACACGGGGTA
TTGAGCCACTGGGCCGGTTTAATTTATTCAAGATGTTCATTCATATGAAAATTGTATTTTTGTACATAAAGAGCTTTAT
TCTATTATTATGCCTCTTATCAAAGTGGGTTCTTTTTTAAAAAAAAAAAATTGTACTTTACCCTGTAAATAAAAATTTT
TAACGTTTTTTACTGAAAAAAAAAAAAAAAAAAAA
CitationChesnutt C, Burrus LW, Brown AM, Niswander L. Coordinate regulation of neural tube patterning and proliferation by TGFbeta and WNT activity. Dev Biol. 2004 Oct 15;274(2):334-47.
CopyrightReprinted from Developmental Biology, Volume 274, Issue 2, Catherine Chesnutt, Laura W. Burrus, Anthony M.C. Brown, and Lee Niswander, Coordinate regulation of neural tube patterning and proliferation by TGFβ and WNT activity, Pages 334-347, Copyright 2004, with permission from Elsevier. Copyright © 2004 Elsevier B.V. All rights reserved.
CommentsThe following in situ probes were used: Ngn-1 (Perez et al., 1999). The accession number AF123883 was given for Ngn-1 in Perez.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-14
stage 14
Neural Crest
Spinal Cord
 

Entry 2

GEISHA IdNGN1.Abu-Elmagd.2001Data SourcePublication
Complete cDNA Template Probeshow
GGCACGAGCCGCTTTCTCCTCTATTTATTTCTAAACCGTTATTGCTTAACCGCAGCCCCGGGAGTGCCTTTCCATGATG
CCCGCGGAGGCGGCGAGCAGCGGCGGCGTTTCGGAGCCGCCCGGAGCTCCGCGGGAGCGGCGGAGGAGACGCGGCCGTG
CGCGGGCGCGGACCGAGGCTTTGCTGCACACCCTTAAACGGAGCCGCCGGGTGAAAGCCAACGACCGGGAGCGGAACCG
CATGCACCACCTCAACGCCGCGCTGGATGAGCTCCGCAGCGTCCTGCCGACCTTCCCCGACGACACCAAACTCACCAAA
ATCGAAACCCTGCGCTTCGCTTACAACTACATCTGGGCCCTCTCCGAGACCCTTCGTTTGGCCGAGCAGTGCCTCCCTC
CTCCCCCCGCCTTCCGCGGGCCCCCCGCGCCCCCAAGCCCCGGCAGCGACGCCGGTTCGTGGCTGTCCAGCGGTTCCCC
GGCCGCCCCCTCGCTCTGCGCCTCCGCCTCCGGCCCCAGCAGCCCGGCCACCTCCGAGGACTGCGGCTACGTCCCCTCG
GACGCCCTGCGGGCCTTCCGCGGGCTGCCCCCCGCCGCCCCGGGCGCTCCCTGCCGCTAGCCCTGCCCGTGCGTGTCTC
CGTCCCCCCCCACCTTCTCCGTATCCCGTTGCACTTTTCAGCCCCTCCCGCCCCCCAGCCCCTCTCTCCGGGGTGCCCT
TTCCCTTCGCCCCCCCGCCTCGTTTTCCATACGACTTGGAAAACCCGGCAAAGAAAAGCGACAGATTTGCTGCCGCAGA
GGAGGTGAAAAGTCAATTTTACAATTTGTAGTTTTCCGGTGAAGAAAAACGAGCATGAAAATTTGGTTTGAACGCCCTG
ACAATGCGATGAAAAGGCTTAGGGGGCCGATGCGGCCCGGGGCGCAGCACGGGGCTCAGCGCGCTGCCGGCCCCCCTCC
CTCACAGTTCCTAACCCCCCCGCGCCCGGGGCGGTTCAGCCCCTCCCGGGGGTCCCAGCACCGCGCCCGATGGGACCCT
CACCCGACGGCCTCATGCATTATAGATGCTGACCCCCGGCGAGGCGGTCCTGCTTCAGAGCGGGAGCACACACGGGGTA
TTGAGCCACTGGGCCGGTTTAATTTATTCAAGATGTTCATTCATATGAAAATTGTATTTTTGTACATAAAGAGCTTTAT
TCTATTATTATGCCTCTTATCAAAGTGGGTTCTTTTTTAAAAAAAAAAAATTGTACTTTACCCTGTAAATAAAAATTTT
TAACGTTTTTTACTGAAAAAAAAAAAAAAAAAAAA
CitationAbu-Elmagd M, Ishii Y, Cheung M, Rex M, Le Rouëdec D, Scotting PJ. cSox3 expression and neurogenesis in the epibranchial placodes. Dev Biol. 2001 Sep 15;237(2):258-69.
CopyrightCopyright © 2001 Academic Press. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204883).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
stage 18
stage 18
stage 18
Nasal Placcode/Nerve
Pharyngeal Arches and Clefts
Placcode
First Nodose Placode
Geniculate Placode
Petrosal Placode
Second Nodose Placode
Trigeminal Placode

Entry 3

GEISHA IdNGN1.Maier.2009Data SourcePublication
Complete cDNA Template Probeshow
GGCACGAGCCGCTTTCTCCTCTATTTATTTCTAAACCGTTATTGCTTAACCGCAGCCCCGGGAGTGCCTTTCCATGATG
CCCGCGGAGGCGGCGAGCAGCGGCGGCGTTTCGGAGCCGCCCGGAGCTCCGCGGGAGCGGCGGAGGAGACGCGGCCGTG
CGCGGGCGCGGACCGAGGCTTTGCTGCACACCCTTAAACGGAGCCGCCGGGTGAAAGCCAACGACCGGGAGCGGAACCG
CATGCACCACCTCAACGCCGCGCTGGATGAGCTCCGCAGCGTCCTGCCGACCTTCCCCGACGACACCAAACTCACCAAA
ATCGAAACCCTGCGCTTCGCTTACAACTACATCTGGGCCCTCTCCGAGACCCTTCGTTTGGCCGAGCAGTGCCTCCCTC
CTCCCCCCGCCTTCCGCGGGCCCCCCGCGCCCCCAAGCCCCGGCAGCGACGCCGGTTCGTGGCTGTCCAGCGGTTCCCC
GGCCGCCCCCTCGCTCTGCGCCTCCGCCTCCGGCCCCAGCAGCCCGGCCACCTCCGAGGACTGCGGCTACGTCCCCTCG
GACGCCCTGCGGGCCTTCCGCGGGCTGCCCCCCGCCGCCCCGGGCGCTCCCTGCCGCTAGCCCTGCCCGTGCGTGTCTC
CGTCCCCCCCCACCTTCTCCGTATCCCGTTGCACTTTTCAGCCCCTCCCGCCCCCCAGCCCCTCTCTCCGGGGTGCCCT
TTCCCTTCGCCCCCCCGCCTCGTTTTCCATACGACTTGGAAAACCCGGCAAAGAAAAGCGACAGATTTGCTGCCGCAGA
GGAGGTGAAAAGTCAATTTTACAATTTGTAGTTTTCCGGTGAAGAAAAACGAGCATGAAAATTTGGTTTGAACGCCCTG
ACAATGCGATGAAAAGGCTTAGGGGGCCGATGCGGCCCGGGGCGCAGCACGGGGCTCAGCGCGCTGCCGGCCCCCCTCC
CTCACAGTTCCTAACCCCCCCGCGCCCGGGGCGGTTCAGCCCCTCCCGGGGGTCCCAGCACCGCGCCCGATGGGACCCT
CACCCGACGGCCTCATGCATTATAGATGCTGACCCCCGGCGAGGCGGTCCTGCTTCAGAGCGGGAGCACACACGGGGTA
TTGAGCCACTGGGCCGGTTTAATTTATTCAAGATGTTCATTCATATGAAAATTGTATTTTTGTACATAAAGAGCTTTAT
TCTATTATTATGCCTCTTATCAAAGTGGGTTCTTTTTTAAAAAAAAAAAATTGTACTTTACCCTGTAAATAAAAATTTT
TAACGTTTTTTACTGAAAAAAAAAAAAAAAAAAAA
CitationMaier E, Gunhaga L. Dynamic expression of neurogenic markers in the developing chick olfactory epithelium. Dev Dyn. 2009 Jun;238(6):1617-25.
CopyrightDev. Dyn Copyright © 2009 John Wiley & Sons, Inc. All Rights Reserved.
CommentsAuthors indicated the probe could be found in another publication (see text). The indicated probe sequence is included here.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 14
stage 14
stage 17
stage 17
Nasal Placode/Nerve
Neural Crest
 
19-24
stage 22
Nasal Placode/Nerve
 
25-30
stage 29
stage 29
Nasal Placode/Nerve
 
31-34
stage 34
stage 34
Nasal Placode/Nerve
 

Entry 4

GEISHA IdNGN1.Maier.2010Data SourcePublication
Complete cDNA Template Probeshow
GGCACGAGCCGCTTTCTCCTCTATTTATTTCTAAACCGTTATTGCTTAACCGCAGCCCCGGGAGTGCCTTTCCATGATG
CCCGCGGAGGCGGCGAGCAGCGGCGGCGTTTCGGAGCCGCCCGGAGCTCCGCGGGAGCGGCGGAGGAGACGCGGCCGTG
CGCGGGCGCGGACCGAGGCTTTGCTGCACACCCTTAAACGGAGCCGCCGGGTGAAAGCCAACGACCGGGAGCGGAACCG
CATGCACCACCTCAACGCCGCGCTGGATGAGCTCCGCAGCGTCCTGCCGACCTTCCCCGACGACACCAAACTCACCAAA
ATCGAAACCCTGCGCTTCGCTTACAACTACATCTGGGCCCTCTCCGAGACCCTTCGTTTGGCCGAGCAGTGCCTCCCTC
CTCCCCCCGCCTTCCGCGGGCCCCCCGCGCCCCCAAGCCCCGGCAGCGACGCCGGTTCGTGGCTGTCCAGCGGTTCCCC
GGCCGCCCCCTCGCTCTGCGCCTCCGCCTCCGGCCCCAGCAGCCCGGCCACCTCCGAGGACTGCGGCTACGTCCCCTCG
GACGCCCTGCGGGCCTTCCGCGGGCTGCCCCCCGCCGCCCCGGGCGCTCCCTGCCGCTAGCCCTGCCCGTGCGTGTCTC
CGTCCCCCCCCACCTTCTCCGTATCCCGTTGCACTTTTCAGCCCCTCCCGCCCCCCAGCCCCTCTCTCCGGGGTGCCCT
TTCCCTTCGCCCCCCCGCCTCGTTTTCCATACGACTTGGAAAACCCGGCAAAGAAAAGCGACAGATTTGCTGCCGCAGA
GGAGGTGAAAAGTCAATTTTACAATTTGTAGTTTTCCGGTGAAGAAAAACGAGCATGAAAATTTGGTTTGAACGCCCTG
ACAATGCGATGAAAAGGCTTAGGGGGCCGATGCGGCCCGGGGCGCAGCACGGGGCTCAGCGCGCTGCCGGCCCCCCTCC
CTCACAGTTCCTAACCCCCCCGCGCCCGGGGCGGTTCAGCCCCTCCCGGGGGTCCCAGCACCGCGCCCGATGGGACCCT
CACCCGACGGCCTCATGCATTATAGATGCTGACCCCCGGCGAGGCGGTCCTGCTTCAGAGCGGGAGCACACACGGGGTA
TTGAGCCACTGGGCCGGTTTAATTTATTCAAGATGTTCATTCATATGAAAATTGTATTTTTGTACATAAAGAGCTTTAT
TCTATTATTATGCCTCTTATCAAAGTGGGTTCTTTTTTAAAAAAAAAAAATTGTACTTTACCCTGTAAATAAAAATTTT
TAACGTTTTTTACTGAAAAAAAAAAAAAAAAAAAA
CitationMaier, E, von Hofsten, J, Nord, H, Fernandes, M, Paek, H, Hebert, JM, Gunhaga, L, Opposing Fgf and Bmp activities regulate the specification of olfactory sensory and respiratory epithelial cell fates. Development. 2010 May 15; 137(10): 1601–1611.
CopyrightCopyright © 2010. Held by the authors. Requested
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # AF123883.1)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-22
stage 22
Nasal Placode/Nerve
 

Entry 5

GEISHA IdNGN1.Yan.2009Data SourcePublication
Complete cDNA Template Probeshow
GGCACGAGCCGCTTTCTCCTCTATTTATTTCTAAACCGTTATTGCTTAACCGCAGCCCCGGGAGTGCCTTTCCATGATG
CCCGCGGAGGCGGCGAGCAGCGGCGGCGTTTCGGAGCCGCCCGGAGCTCCGCGGGAGCGGCGGAGGAGACGCGGCCGTG
CGCGGGCGCGGACCGAGGCTTTGCTGCACACCCTTAAACGGAGCCGCCGGGTGAAAGCCAACGACCGGGAGCGGAACCG
CATGCACCACCTCAACGCCGCGCTGGATGAGCTCCGCAGCGTCCTGCCGACCTTCCCCGACGACACCAAACTCACCAAA
ATCGAAACCCTGCGCTTCGCTTACAACTACATCTGGGCCCTCTCCGAGACCCTTCGTTTGGCCGAGCAGTGCCTCCCTC
CTCCCCCCGCCTTCCGCGGGCCCCCCGCGCCCCCAAGCCCCGGCAGCGACGCCGGTTCGTGGCTGTCCAGCGGTTCCCC
GGCCGCCCCCTCGCTCTGCGCCTCCGCCTCCGGCCCCAGCAGCCCGGCCACCTCCGAGGACTGCGGCTACGTCCCCTCG
GACGCCCTGCGGGCCTTCCGCGGGCTGCCCCCCGCCGCCCCGGGCGCTCCCTGCCGCTAGCCCTGCCCGTGCGTGTCTC
CGTCCCCCCCCACCTTCTCCGTATCCCGTTGCACTTTTCAGCCCCTCCCGCCCCCCAGCCCCTCTCTCCGGGGTGCCCT
TTCCCTTCGCCCCCCCGCCTCGTTTTCCATACGACTTGGAAAACCCGGCAAAGAAAAGCGACAGATTTGCTGCCGCAGA
GGAGGTGAAAAGTCAATTTTACAATTTGTAGTTTTCCGGTGAAGAAAAACGAGCATGAAAATTTGGTTTGAACGCCCTG
ACAATGCGATGAAAAGGCTTAGGGGGCCGATGCGGCCCGGGGCGCAGCACGGGGCTCAGCGCGCTGCCGGCCCCCCTCC
CTCACAGTTCCTAACCCCCCCGCGCCCGGGGCGGTTCAGCCCCTCCCGGGGGTCCCAGCACCGCGCCCGATGGGACCCT
CACCCGACGGCCTCATGCATTATAGATGCTGACCCCCGGCGAGGCGGTCCTGCTTCAGAGCGGGAGCACACACGGGGTA
TTGAGCCACTGGGCCGGTTTAATTTATTCAAGATGTTCATTCATATGAAAATTGTATTTTTGTACATAAAGAGCTTTAT
TCTATTATTATGCCTCTTATCAAAGTGGGTTCTTTTTTAAAAAAAAAAAATTGTACTTTACCCTGTAAATAAAAATTTT
TAACGTTTTTTACTGAAAAAAAAAAAAAAAAAAAA
CitationYan RT, He L, Wang SZ. Pro-photoreceptor activity of chick neurogenin1. Invest Ophthalmol Vis Sci. 2009 Dec;50(12):5567-76. Epub 2009 Jul 2.
CopyrightCopyright © 2012 by the Association for Research in Vision and Ophthalmology
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204883.1)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 1
stage 1
  
13-18
stage 13
Retina
 
19-24
stage 20
stage 24
Retina
 
25-30
stage 25
stage 27
stage 28
Retina
 
31
stage 31
Retina
 

Entry 6

GEISHA IdNGN1.LeDréau.2012Data SourcePublication
Complete cDNA Template Probeshow
GGCACGAGCCGCTTTCTCCTCTATTTATTTCTAAACCGTTATTGCTTAACCGCAGCCCCGGGAGTGCCTTTCCATGATG
CCCGCGGAGGCGGCGAGCAGCGGCGGCGTTTCGGAGCCGCCCGGAGCTCCGCGGGAGCGGCGGAGGAGACGCGGCCGTG
CGCGGGCGCGGACCGAGGCTTTGCTGCACACCCTTAAACGGAGCCGCCGGGTGAAAGCCAACGACCGGGAGCGGAACCG
CATGCACCACCTCAACGCCGCGCTGGATGAGCTCCGCAGCGTCCTGCCGACCTTCCCCGACGACACCAAACTCACCAAA
ATCGAAACCCTGCGCTTCGCTTACAACTACATCTGGGCCCTCTCCGAGACCCTTCGTTTGGCCGAGCAGTGCCTCCCTC
CTCCCCCCGCCTTCCGCGGGCCCCCCGCGCCCCCAAGCCCCGGCAGCGACGCCGGTTCGTGGCTGTCCAGCGGTTCCCC
GGCCGCCCCCTCGCTCTGCGCCTCCGCCTCCGGCCCCAGCAGCCCGGCCACCTCCGAGGACTGCGGCTACGTCCCCTCG
GACGCCCTGCGGGCCTTCCGCGGGCTGCCCCCCGCCGCCCCGGGCGCTCCCTGCCGCTAGCCCTGCCCGTGCGTGTCTC
CGTCCCCCCCCACCTTCTCCGTATCCCGTTGCACTTTTCAGCCCCTCCCGCCCCCCAGCCCCTCTCTCCGGGGTGCCCT
TTCCCTTCGCCCCCCCGCCTCGTTTTCCATACGACTTGGAAAACCCGGCAAAGAAAAGCGACAGATTTGCTGCCGCAGA
GGAGGTGAAAAGTCAATTTTACAATTTGTAGTTTTCCGGTGAAGAAAAACGAGCATGAAAATTTGGTTTGAACGCCCTG
ACAATGCGATGAAAAGGCTTAGGGGGCCGATGCGGCCCGGGGCGCAGCACGGGGCTCAGCGCGCTGCCGGCCCCCCTCC
CTCACAGTTCCTAACCCCCCCGCGCCCGGGGCGGTTCAGCCCCTCCCGGGGGTCCCAGCACCGCGCCCGATGGGACCCT
CACCCGACGGCCTCATGCATTATAGATGCTGACCCCCGGCGAGGCGGTCCTGCTTCAGAGCGGGAGCACACACGGGGTA
TTGAGCCACTGGGCCGGTTTAATTTATTCAAGATGTTCATTCATATGAAAATTGTATTTTTGTACATAAAGAGCTTTAT
TCTATTATTATGCCTCTTATCAAAGTGGGTTCTTTTTTAAAAAAAAAAAATTGTACTTTACCCTGTAAATAAAAATTTT
TAACGTTTTTTACTGAAAAAAAAAAAAAAAAAAAA
CitationLe Dréau G, Garcia-Campmany L, Rabadán MA, Ferronha T, Tozer S, Briscoe J, Martí E. Canonical BMP7 activity is required for the generation of discrete neuronal populations in the dorsal spinal cord. Development. 2012 Jan;139(2):259-68.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204883.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
Neural Plate/Tube
control embryo

Entry 7

GEISHA IdNGN1.Abello.2010Data SourcePublication
Complete cDNA Template Probeshow
GGCACGAGCCGCTTTCTCCTCTATTTATTTCTAAACCGTTATTGCTTAACCGCAGCCCCGGGAGTGCCTTTCCATGATG
CCCGCGGAGGCGGCGAGCAGCGGCGGCGTTTCGGAGCCGCCCGGAGCTCCGCGGGAGCGGCGGAGGAGACGCGGCCGTG
CGCGGGCGCGGACCGAGGCTTTGCTGCACACCCTTAAACGGAGCCGCCGGGTGAAAGCCAACGACCGGGAGCGGAACCG
CATGCACCACCTCAACGCCGCGCTGGATGAGCTCCGCAGCGTCCTGCCGACCTTCCCCGACGACACCAAACTCACCAAA
ATCGAAACCCTGCGCTTCGCTTACAACTACATCTGGGCCCTCTCCGAGACCCTTCGTTTGGCCGAGCAGTGCCTCCCTC
CTCCCCCCGCCTTCCGCGGGCCCCCCGCGCCCCCAAGCCCCGGCAGCGACGCCGGTTCGTGGCTGTCCAGCGGTTCCCC
GGCCGCCCCCTCGCTCTGCGCCTCCGCCTCCGGCCCCAGCAGCCCGGCCACCTCCGAGGACTGCGGCTACGTCCCCTCG
GACGCCCTGCGGGCCTTCCGCGGGCTGCCCCCCGCCGCCCCGGGCGCTCCCTGCCGCTAGCCCTGCCCGTGCGTGTCTC
CGTCCCCCCCCACCTTCTCCGTATCCCGTTGCACTTTTCAGCCCCTCCCGCCCCCCAGCCCCTCTCTCCGGGGTGCCCT
TTCCCTTCGCCCCCCCGCCTCGTTTTCCATACGACTTGGAAAACCCGGCAAAGAAAAGCGACAGATTTGCTGCCGCAGA
GGAGGTGAAAAGTCAATTTTACAATTTGTAGTTTTCCGGTGAAGAAAAACGAGCATGAAAATTTGGTTTGAACGCCCTG
ACAATGCGATGAAAAGGCTTAGGGGGCCGATGCGGCCCGGGGCGCAGCACGGGGCTCAGCGCGCTGCCGGCCCCCCTCC
CTCACAGTTCCTAACCCCCCCGCGCCCGGGGCGGTTCAGCCCCTCCCGGGGGTCCCAGCACCGCGCCCGATGGGACCCT
CACCCGACGGCCTCATGCATTATAGATGCTGACCCCCGGCGAGGCGGTCCTGCTTCAGAGCGGGAGCACACACGGGGTA
TTGAGCCACTGGGCCGGTTTAATTTATTCAAGATGTTCATTCATATGAAAATTGTATTTTTGTACATAAAGAGCTTTAT
TCTATTATTATGCCTCTTATCAAAGTGGGTTCTTTTTTAAAAAAAAAAAATTGTACTTTACCCTGTAAATAAAAATTTT
TAACGTTTTTTACTGAAAAAAAAAAAAAAAAAAAA
CitationAbelló G, Khatri S, Radosevic M, Scotting PJ, Giráldez F, Alsina B., Independent regulation of Sox3 and Lmx1b by FGF and BMP signaling influences the neurogenic and non-neurogenic domains in the chick otic placode. Dev Biol. 2010 Mar 1;339(1):166-78. Epub 2010 Jan 4.
CopyrightCopyright © 2009 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204883.1)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7
stage 7
stage 7
Ear/Otic Placode
HH stage 7-8-

Entry 8

GEISHA IdNGN1.Akai.2005Data SourcePublication
Complete cDNA Template Probeshow
GGCACGAGCCGCTTTCTCCTCTATTTATTTCTAAACCGTTATTGCTTAACCGCAGCCCCGGGAGTGCCTTTCCATGATG
CCCGCGGAGGCGGCGAGCAGCGGCGGCGTTTCGGAGCCGCCCGGAGCTCCGCGGGAGCGGCGGAGGAGACGCGGCCGTG
CGCGGGCGCGGACCGAGGCTTTGCTGCACACCCTTAAACGGAGCCGCCGGGTGAAAGCCAACGACCGGGAGCGGAACCG
CATGCACCACCTCAACGCCGCGCTGGATGAGCTCCGCAGCGTCCTGCCGACCTTCCCCGACGACACCAAACTCACCAAA
ATCGAAACCCTGCGCTTCGCTTACAACTACATCTGGGCCCTCTCCGAGACCCTTCGTTTGGCCGAGCAGTGCCTCCCTC
CTCCCCCCGCCTTCCGCGGGCCCCCCGCGCCCCCAAGCCCCGGCAGCGACGCCGGTTCGTGGCTGTCCAGCGGTTCCCC
GGCCGCCCCCTCGCTCTGCGCCTCCGCCTCCGGCCCCAGCAGCCCGGCCACCTCCGAGGACTGCGGCTACGTCCCCTCG
GACGCCCTGCGGGCCTTCCGCGGGCTGCCCCCCGCCGCCCCGGGCGCTCCCTGCCGCTAGCCCTGCCCGTGCGTGTCTC
CGTCCCCCCCCACCTTCTCCGTATCCCGTTGCACTTTTCAGCCCCTCCCGCCCCCCAGCCCCTCTCTCCGGGGTGCCCT
TTCCCTTCGCCCCCCCGCCTCGTTTTCCATACGACTTGGAAAACCCGGCAAAGAAAAGCGACAGATTTGCTGCCGCAGA
GGAGGTGAAAAGTCAATTTTACAATTTGTAGTTTTCCGGTGAAGAAAAACGAGCATGAAAATTTGGTTTGAACGCCCTG
ACAATGCGATGAAAAGGCTTAGGGGGCCGATGCGGCCCGGGGCGCAGCACGGGGCTCAGCGCGCTGCCGGCCCCCCTCC
CTCACAGTTCCTAACCCCCCCGCGCCCGGGGCGGTTCAGCCCCTCCCGGGGGTCCCAGCACCGCGCCCGATGGGACCCT
CACCCGACGGCCTCATGCATTATAGATGCTGACCCCCGGCGAGGCGGTCCTGCTTCAGAGCGGGAGCACACACGGGGTA
TTGAGCCACTGGGCCGGTTTAATTTATTCAAGATGTTCATTCATATGAAAATTGTATTTTTGTACATAAAGAGCTTTAT
TCTATTATTATGCCTCTTATCAAAGTGGGTTCTTTTTTAAAAAAAAAAAATTGTACTTTACCCTGTAAATAAAAATTTT
TAACGTTTTTTACTGAAAAAAAAAAAAAAAAAAAA
CitationJun Akai, Pam A. Halley, Kate G. Storey. FGF-dependent Notch signaling maintains the spinal cord stem zone. Genes Dev. 2005 December 1; 19(23): 2877–2887.
CopyrightCopyright © 2005, Cold Spring Harbor Laboratory Press
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204883 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
stage 10
Neural Plate/Tube
Spinal Cord
 

Entry 9

GEISHA IdNGN1.Frowein.2002Data SourcePublication
Complete cDNA Template Probeshow
GGCACGAGCCGCTTTCTCCTCTATTTATTTCTAAACCGTTATTGCTTAACCGCAGCCCCGGGAGTGCCTTTCCATGATG
CCCGCGGAGGCGGCGAGCAGCGGCGGCGTTTCGGAGCCGCCCGGAGCTCCGCGGGAGCGGCGGAGGAGACGCGGCCGTG
CGCGGGCGCGGACCGAGGCTTTGCTGCACACCCTTAAACGGAGCCGCCGGGTGAAAGCCAACGACCGGGAGCGGAACCG
CATGCACCACCTCAACGCCGCGCTGGATGAGCTCCGCAGCGTCCTGCCGACCTTCCCCGACGACACCAAACTCACCAAA
ATCGAAACCCTGCGCTTCGCTTACAACTACATCTGGGCCCTCTCCGAGACCCTTCGTTTGGCCGAGCAGTGCCTCCCTC
CTCCCCCCGCCTTCCGCGGGCCCCCCGCGCCCCCAAGCCCCGGCAGCGACGCCGGTTCGTGGCTGTCCAGCGGTTCCCC
GGCCGCCCCCTCGCTCTGCGCCTCCGCCTCCGGCCCCAGCAGCCCGGCCACCTCCGAGGACTGCGGCTACGTCCCCTCG
GACGCCCTGCGGGCCTTCCGCGGGCTGCCCCCCGCCGCCCCGGGCGCTCCCTGCCGCTAGCCCTGCCCGTGCGTGTCTC
CGTCCCCCCCCACCTTCTCCGTATCCCGTTGCACTTTTCAGCCCCTCCCGCCCCCCAGCCCCTCTCTCCGGGGTGCCCT
TTCCCTTCGCCCCCCCGCCTCGTTTTCCATACGACTTGGAAAACCCGGCAAAGAAAAGCGACAGATTTGCTGCCGCAGA
GGAGGTGAAAAGTCAATTTTACAATTTGTAGTTTTCCGGTGAAGAAAAACGAGCATGAAAATTTGGTTTGAACGCCCTG
ACAATGCGATGAAAAGGCTTAGGGGGCCGATGCGGCCCGGGGCGCAGCACGGGGCTCAGCGCGCTGCCGGCCCCCCTCC
CTCACAGTTCCTAACCCCCCCGCGCCCGGGGCGGTTCAGCCCCTCCCGGGGGTCCCAGCACCGCGCCCGATGGGACCCT
CACCCGACGGCCTCATGCATTATAGATGCTGACCCCCGGCGAGGCGGTCCTGCTTCAGAGCGGGAGCACACACGGGGTA
TTGAGCCACTGGGCCGGTTTAATTTATTCAAGATGTTCATTCATATGAAAATTGTATTTTTGTACATAAAGAGCTTTAT
TCTATTATTATGCCTCTTATCAAAGTGGGTTCTTTTTTAAAAAAAAAAAATTGTACTTTACCCTGTAAATAAAAATTTT
TAACGTTTTTTACTGAAAAAAAAAAAAAAAAAAAA
CitationFrowein J, Campbell K, Götz M. Expression of Ngn1, Ngn2, Cash1, Gsh2 and Sfrp1 in the developing chick telencephalon. Mech Dev. 2002 Jan;110(1-2):249-52.
CopyrightCopyright © 2002 Elsevier Science Ireland Ltd. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204883.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31
stage 31
stage 31
Telencephalon
 

Entry 10

GEISHA IdNGN1.Zhou.2001Data SourcePublication
Complete cDNA Template Probeshow
GGCACGAGCCGCTTTCTCCTCTATTTATTTCTAAACCGTTATTGCTTAACCGCAGCCCCGGGAGTGCCTTTCCATGATG
CCCGCGGAGGCGGCGAGCAGCGGCGGCGTTTCGGAGCCGCCCGGAGCTCCGCGGGAGCGGCGGAGGAGACGCGGCCGTG
CGCGGGCGCGGACCGAGGCTTTGCTGCACACCCTTAAACGGAGCCGCCGGGTGAAAGCCAACGACCGGGAGCGGAACCG
CATGCACCACCTCAACGCCGCGCTGGATGAGCTCCGCAGCGTCCTGCCGACCTTCCCCGACGACACCAAACTCACCAAA
ATCGAAACCCTGCGCTTCGCTTACAACTACATCTGGGCCCTCTCCGAGACCCTTCGTTTGGCCGAGCAGTGCCTCCCTC
CTCCCCCCGCCTTCCGCGGGCCCCCCGCGCCCCCAAGCCCCGGCAGCGACGCCGGTTCGTGGCTGTCCAGCGGTTCCCC
GGCCGCCCCCTCGCTCTGCGCCTCCGCCTCCGGCCCCAGCAGCCCGGCCACCTCCGAGGACTGCGGCTACGTCCCCTCG
GACGCCCTGCGGGCCTTCCGCGGGCTGCCCCCCGCCGCCCCGGGCGCTCCCTGCCGCTAGCCCTGCCCGTGCGTGTCTC
CGTCCCCCCCCACCTTCTCCGTATCCCGTTGCACTTTTCAGCCCCTCCCGCCCCCCAGCCCCTCTCTCCGGGGTGCCCT
TTCCCTTCGCCCCCCCGCCTCGTTTTCCATACGACTTGGAAAACCCGGCAAAGAAAAGCGACAGATTTGCTGCCGCAGA
GGAGGTGAAAAGTCAATTTTACAATTTGTAGTTTTCCGGTGAAGAAAAACGAGCATGAAAATTTGGTTTGAACGCCCTG
ACAATGCGATGAAAAGGCTTAGGGGGCCGATGCGGCCCGGGGCGCAGCACGGGGCTCAGCGCGCTGCCGGCCCCCCTCC
CTCACAGTTCCTAACCCCCCCGCGCCCGGGGCGGTTCAGCCCCTCCCGGGGGTCCCAGCACCGCGCCCGATGGGACCCT
CACCCGACGGCCTCATGCATTATAGATGCTGACCCCCGGCGAGGCGGTCCTGCTTCAGAGCGGGAGCACACACGGGGTA
TTGAGCCACTGGGCCGGTTTAATTTATTCAAGATGTTCATTCATATGAAAATTGTATTTTTGTACATAAAGAGCTTTAT
TCTATTATTATGCCTCTTATCAAAGTGGGTTCTTTTTTAAAAAAAAAAAATTGTACTTTACCCTGTAAATAAAAATTTT
TAACGTTTTTTACTGAAAAAAAAAAAAAAAAAAAA
CitationZhou Q, Choi G, Anderson DJ. The bHLH transcription factor Olig2 promotes oligodendrocyte differentiation in collaboration with Nkx2.2. Neuron. 2001 Sep 13;31(5):791-807
CopyrightCopyright 2001 by Cell Press
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204883.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 19
stage 23
Spinal Cord
Double label in situ hybridization:
Purple: Olig2
RED: Ngn1
25-30
stage 26
stage 29
Spinal Cord
Double label in situ hybridization:
Purple: Olig2
RED: Ngn1
31
stage 31
Spinal Cord
Double label in situ hybridization:
Purple: Olig2
RED: Ngn1

Entry 11

GEISHA IdNgn-1.Ishii.2001Data SourcePublication
Complete cDNA Template Probeshow
GGCACGAGCCGCTTTCTCCTCTATTTATTTCTAAACCGTTATTGCTTAACCGCAGCCCCGGGAGTGCCTTTCCATGATG
CCCGCGGAGGCGGCGAGCAGCGGCGGCGTTTCGGAGCCGCCCGGAGCTCCGCGGGAGCGGCGGAGGAGACGCGGCCGTG
CGCGGGCGCGGACCGAGGCTTTGCTGCACACCCTTAAACGGAGCCGCCGGGTGAAAGCCAACGACCGGGAGCGGAACCG
CATGCACCACCTCAACGCCGCGCTGGATGAGCTCCGCAGCGTCCTGCCGACCTTCCCCGACGACACCAAACTCACCAAA
ATCGAAACCCTGCGCTTCGCTTACAACTACATCTGGGCCCTCTCCGAGACCCTTCGTTTGGCCGAGCAGTGCCTCCCTC
CTCCCCCCGCCTTCCGCGGGCCCCCCGCGCCCCCAAGCCCCGGCAGCGACGCCGGTTCGTGGCTGTCCAGCGGTTCCCC
GGCCGCCCCCTCGCTCTGCGCCTCCGCCTCCGGCCCCAGCAGCCCGGCCACCTCCGAGGACTGCGGCTACGTCCCCTCG
GACGCCCTGCGGGCCTTCCGCGGGCTGCCCCCCGCCGCCCCGGGCGCTCCCTGCCGCTAGCCCTGCCCGTGCGTGTCTC
CGTCCCCCCCCACCTTCTCCGTATCCCGTTGCACTTTTCAGCCCCTCCCGCCCCCCAGCCCCTCTCTCCGGGGTGCCCT
TTCCCTTCGCCCCCCCGCCTCGTTTTCCATACGACTTGGAAAACCCGGCAAAGAAAAGCGACAGATTTGCTGCCGCAGA
GGAGGTGAAAAGTCAATTTTACAATTTGTAGTTTTCCGGTGAAGAAAAACGAGCATGAAAATTTGGTTTGAACGCCCTG
ACAATGCGATGAAAAGGCTTAGGGGGCCGATGCGGCCCGGGGCGCAGCACGGGGCTCAGCGCGCTGCCGGCCCCCCTCC
CTCACAGTTCCTAACCCCCCCGCGCCCGGGGCGGTTCAGCCCCTCCCGGGGGTCCCAGCACCGCGCCCGATGGGACCCT
CACCCGACGGCCTCATGCATTATAGATGCTGACCCCCGGCGAGGCGGTCCTGCTTCAGAGCGGGAGCACACACGGGGTA
TTGAGCCACTGGGCCGGTTTAATTTATTCAAGATGTTCATTCATATGAAAATTGTATTTTTGTACATAAAGAGCTTTAT
TCTATTATTATGCCTCTTATCAAAGTGGGTTCTTTTTTAAAAAAAAAAAATTGTACTTTACCCTGTAAATAAAAATTTT
TAACGTTTTTTACTGAAAAAAAAAAAAAAAAAAAA
CitationIshii Y, Abu-Elmagd M, Scotting PJ. Sox3 expression defines a common primordium for the epibranchial placodes in chick. Dev Biol. 2001 Aug 15;236(2):344-53.
CopyrightCopyright © 2001 Academic Press.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204883.1). Ngn-1 gene name is also known as NEUROG1 in NCBI.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 21
stage 21
Peripheral Nervous System
geniculate placode; petrosal placode; first nodose placode; second nodose placode
petrosal placode, neuronal precursors
31-44
stage 44
  

Entry 12

GEISHA IdNGN1.Alrefaei.2020Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GGCACGAGCCGCTTTCTCCTCTATTTATTTCTAAACCGTTATTGCTTAACCGCAGCCCCGGGAGTGCCTTTCCATGATG
CCCGCGGAGGCGGCGAGCAGCGGCGGCGTTTCGGAGCCGCCCGGAGCTCCGCGGGAGCGGCGGAGGAGACGCGGCCGTG
CGCGGGCGCGGACCGAGGCTTTGCTGCACACCCTTAAACGGAGCCGCCGGGTGAAAGCCAACGACCGGGAGCGGAACCG
CATGCACCACCTCAACGCCGCGCTGGATGAGCTCCGCAGCGTCCTGCCGACCTTCCCCGACGACACCAAACTCACCAAA
ATCGAAACCCTGCGCTTCGCTTACAACTACATCTGGGCCCTCTCCGAGACCCTTCGTTTGGCCGAGCAGTGCCTCCCTC
CTCCCCCCGCCTTCCGCGGGCCCCCCGCGCCCCCAAGCCCCGGCAGCGACGCCGGTTCGTGGCTGTCCAGCGGTTCCCC
GGCCGCCCCCTCGCTCTGCGCCTCCGCCTCCGGCCCCAGCAGCCCGGCCACCTCCGAGGACTGCGGCTACGTCCCCTCG
GACGCCCTGCGGGCCTTCCGCGGGCTGCCCCCCGCCGCCCCGGGCGCTCCCTGCCGCTAGCCCTGCCCGTGCGTGTCTC
CGTCCCCCCCCACCTTCTCCGTATCCCGTTGCACTTTTCAGCCCCTCCCGCCCCCCAGCCCCTCTCTCCGGGGTGCCCT
TTCCCTTCGCCCCCCCGCCTCGTTTTCCATACGACTTGGAAAACCCGGCAAAGAAAAGCGACAGATTTGCTGCCGCAGA
GGAGGTGAAAAGTCAATTTTACAATTTGTAGTTTTCCGGTGAAGAAAAACGAGCATGAAAATTTGGTTTGAACGCCCTG
ACAATGCGATGAAAAGGCTTAGGGGGCCGATGCGGCCCGGGGCGCAGCACGGGGCTCAGCGCGCTGCCGGCCCCCCTCC
CTCACAGTTCCTAACCCCCCCGCGCCCGGGGCGGTTCAGCCCCTCCCGGGGGTCCCAGCACCGCGCCCGATGGGACCCT
CACCCGACGGCCTCATGCATTATAGATGCTGACCCCCGGCGAGGCGGTCCTGCTTCAGAGCGGGAGCACACACGGGGTA
TTGAGCCACTGGGCCGGTTTAATTTATTCAAGATGTTCATTCATATGAAAATTGTATTTTTGTACATAAAGAGCTTTAT
TCTATTATTATGCCTCTTATCAAAGTGGGTTCTTTTTTAAAAAAAAAAAATTGTACTTTACCCTGTAAATAAAAATTTT
TAACGTTTTTTACTGAAAAAAAAAAAAAAAAAAAA
CitationAbdulmajeed Fahad Alrefaei, Andrea E Münsterberg , Grant N Wheeler. FZD10 regulates cell proliferation and mediates Wnt1 induced neurogenesis in the developing spinal cord. PLoS One 2020 Jun 12;15(6):e0219721. DOI: 10.1371/journal.pone.0219721.
CopyrightCopyright © 2020 Alrefaei et al.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (add accession number). NGN1 is also known as ath4c, and neurogenin.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 24
Neural Plate/Tube
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.407

Mouse

EmageMGI:107754
EurexpressMGI:107754
MGI GXDMGI:107754

Frog

Xenbase491451

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-990415-174
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