GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

OLFM1
olfactomedin 1

Gene
Official SymbolOLFM1
Official Full Nameolfactomedin 1
CGNC ID1803
also known asNOELIN-1, olfactomedin-1, noelin|neuronal olfactomedin-related ER localized protein|pancortin
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204767
PolypeptideNP_990098
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.3402
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human10439ENSG00000130558MIM:605366
Mouse56177ENSMUSG00000026833All phenotypic alleles (5):Targeted, knock-out(1) Targeted, other(4) MGI:1860437
Xenopus100101729, 398287491790
Zebrafish445092, 436764ENSDARG00000014053ZDB-GENE-040801-228, ZDB-GENE-040718-194ZFIN:ZDB-GENE-040801-228, ZFIN:ZDB-GENE-040718-194
Gene Ontology
Molecular Function
Biological Processmulticellular organismal development
Cellular Componentcell junction, extracellular region, synapse
Links to other databases
Entrez Gene395535
Ensembl GeneENSGALG00000002515
KEGGgga:395535

Entry 1

GEISHA IdOLFM1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGCAACATCGTCATCAGCAAGC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGCCCACACAGAAGAGAGCGAATCcDNA Template Length727
Forward cDNA Template Probeshow
GGTAAATTCCACAGTCATTGCCTTACTTCTTTTGTATGCGCTATAGGTTTGCTATCGGAACCGAAACCCTTCCAAACCC
CCAACTGGAATGGTTCCCCCGGGGCAATTCCCACCGCAAATATATGGGTAGGTGTGAATCCCTAAACCCGGGGCCAAAT
TTTAAAAAAGGAAAAGTTAAGGCTAACTGTCCAGGCCATGCCTAAAAACCCCCCCTGGCCGTTGGCCTAAATTTTGCAA
CCGGTTGGTTATTTTCCTCTTTTAAATGGGGTTCCCCCAGAATAAGAATTGGTTCCTAATTGGTTCCCCCCTTTTTCCC
CCTTTTTTCCTTGGTTTTCCACAACCGTTTTTTAACAAGGGAAGGGATACCACTCCTCCGAACCCCTGAACTGGAAAAA
GGGGGCATTTTTAAATATTTGGTGGCCCCTGTTTCCTGGGTAAAAGGGCCCACCCCTTGGGGTGTTGTCCCCCCAGGAA
AAAGTTGGAATAATTTTTTTTTAACCGGAAGTTCATCTTACTTCTTCGGTGTAGCCTTTGTTTTGTTAGCCTAATGGCA
CCTTCTTGGCCCCCCCAAAAAAACCTTTTTTTGATTAAAACAATGCCCACAATAATAAAGACTCCCCCCCCCCGCCTTT
TTCAGGAAACAGGGTTTCCCGGCTGGAAGGCCCCCCCCCGGGGGTTGGGGGCCCCCCCTCTGGTGAACAAAATTAAAAA
AAC
CommentsNo expression observed at or before stage 4.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 6
Neural Plate/Tube
Paraxial Mesoderm
Unlabeled
Stages 3-4.
7-12
stage 7
stage 8
stage 9
stage 10
stage 12
Anterior Neuropore
Hindbrain
Neural Crest
Neural Plate/Tube
Paraxial Mesoderm
Somites
Dorsal view.
13-18
stage 13
stage 13
stage 17
Ear/Otic Placode
Neural Crest
Neural Plate/Tube
Paraxial Mesoderm
Somites
Spinal Cord
Spinal Ganglia and Nerves
Dorsal view.
Ventral view.
19-24
stage 19
stage 22
stage 23
Head Mesenchyme
Paraxial Mesoderm
Somites
Spinal Cord
Spinal Ganglia and Nerves
 
25
stage 25
Head Mesenchyme
Hindbrain
Spinal Cord
Spinal Ganglia and Nerves
 

Entry 2

GEISHA IdNoelin-1.Barembaum.2000Data SourcePublication
Complete cDNA Template Probeshow
CGTCCCCAGCGGCATGGAGCCCGGCGCCGGTGCAGAATGAAGGGTGCCTGGCGCCCCCCCCTGCAGACATGTCTGTGCC
TTTACTCAAGATTGGAGTCGTCCTCAGCACCATGGCCATGATCACCAATTGGATGTCGCAGACGCTGCCCTCCCTCGTG
GGGCTCAACACCACCAAACTCACGGCGGCCTCGGGCGGCACCTTGGATCGCAGCACGGGAGTGTTGCCTACCAACCCAG
AGGAAAGCTGGCAGGTCTACAGCTCTGCCCAGGATAGCGAGGGACGTTGTATATGCACAGTGGTGGCACCTCAACAGAC
GATGTGCTCGCGTGATGCCAGGACAAAGCAGCTGAGACAACTATTAGAAAAGGTGCAAAACATGTCTCAGTCAATAGAG
GTGTTGGACAGGCGGACCCAGCGAGACCTACAGTACGTGGAGAAGATGGAAAACCAGATGAGAGGACTGGAATCCAAAT
TTAAGCAAGTGGAAGAAAGCCACAAGCAGCACCTGGCGAGGCAGTTTAAGGCAATAAAAGCGAAAATGGAGGAACTTAG
GCCTTTGATACCAGTGTTGGAAGAGTACAAAGCCGATGCCAAATTGGTATTGCAGTTTAAAGAGGAGGTCCAGAATCTG
ACGTCAGTTCTAAACGAACTCCAGGAAGAGATTGGCGCCTATGACTACGAAGAGCTTCAGAACAGAGTGTCAAATCTTG
AAGAAAGGCTTCGTGCATGCATGCAAAAATTAGCTTGTGGCAAGCTGACGGGAATAAGTGACCCAATCACAATTAAAAC
CTCGGGGTCCCGCTTCGGCTCGTGGATGACGGACCCTCTCGCCCCAGAGGGAGAGAACAAGGTCTGGTACATGGACAGC
TACCACAACAACCGCTTCGTCCGCGAATACAAATCCATGGCGGATTTCATGAACACCGACAATTTTACCTCTCACCGTC
TCCCTCACCCGTGGTCAGGCACCGGTCAAGTGGTCTACAATGGTTCTATCTATTTCAATAAATACCAAAGCCACATAAT
TATCAGGTTTGACTTGAAAACAGAGACCATTCTCAAGACTCGCAGCCTGGATTATGCTGGCTACAACAACATGTACCAC
TACGCCTGGGGGGG
CitationBarembaum, M., Moreno, T., LaBonne, C. et al. Noelin-1 is a secreted glycoprotein involved in generation of the neural crest. Nat Cell Biol 2, 219–225 (2000).
CopyrightCopyright © 2000, Springer Nature.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (accession NM_204767.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
stage 8
stage 8
stage 10
stage 10
Neural Crest
Neural Plate/Tube
Paraxial Mesoderm
 
13-15
stage 15
stage 15
stage 15
Cranial Ganglia
Neural Crest
Neural Plate/Tube
Somites
Spinal Ganglia and Nerves
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.3402

Mouse

EmageMGI:1860437
EurexpressMGI:1860437
MGI GXDMGI:1860437

Frog

Xenbase491790

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040801-228, ZDB-GENE-040718-194
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona