GEISHA - A Chicken Embryo Gene Expression Database
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PCDH19
protocadherin 19

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolPCDH19
Official Full Nameprotocadherin 19
CGNC ID51678
also known asprotocadherin-19, protocadherin-19
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001098607
PolypeptideNP_001092077
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.2405
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human57526ENSG00000165194MIM:300088MIM:300460
Mouse279653ENSMUSG00000051323MGI:2685563
Xenopus1004945051113171
Zebrafish555688ZDB-GENE-030131-4218ZFIN:ZDB-GENE-030131-4218
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene422263
Ensembl GeneENSGALG00000006822
KEGGgga:422263

Entry 1

GEISHA IdPCDH19.Lin.2012Data SourcePublication
Complete cDNA Template Probeshow
CCCGGGGGCCTACCTCCTCTCAGTCTCAGCAAGGGACCCTGACCTGGGCCTCAATGGCAGCGTCTCCTACCAGATTGTG
CCCTCCCAAGTCAGGGACATGCCTGTCTTCACTTATGTCTCCATCAACCCCAACTCTGGAGATATCTATGCCTTGAGGT
CCTTCAATCATGAACAGACCAAGGCCTTTGAGTTCAAAGTCTTGGCGAAAGATGGGGGCAATCCCTCTCTGCAGAGCAA
TGCCACTGTCAGGGTGATTGTCCTGGATGTCAACGACAACACGCCGGTGATCACGGCCCCACCGTTGGTCAATGGGACC
GCGGAGGTGTACATCCCCCGGAACGCAGGGGTTGGCTACTTGGTGACAGTGGTCAAGGCAGATGACTATGACGAGGGTG
AAAATGGCAGGCTTTCCTATGAAATGGTGGAAGGAGACAGAGGATTTTTTGAGATAGACCAGGTCAATGGAGAGATAAG
GACCACCAGAGCCTTTGGGGAGAATGCCAAGACAGCCTACGAGCTGATCGTGGTGGCTCACGACCATGGAAAAACATCC
CTGTCGGCCTCTGCCTTGATTTTGATATACCTGTCCCCAGCCCTGGATGCCCAGGAGTCCATAGGATCTGTTAACCTCT
CCCTGATTTTCATTATTGCCCTGGGGTCTATTGCGGCCATTCTTTTTGTCACCATGATCTTCGTGGCAGTAAAGTGCAA
AAGGGATAACAAGGAAATCAGGACCTATAACTGCAGAATCGCAGAGTACTCCTACGGGCATCAGAAGAAATCAAGCAAG
AAGAAGAAAATCAGCAAGAACGATATCCGCCTGGTTCCGCGCGACGTGGAGGAGACGGATAAAATGAACGTTGTGAGCT
GCTCCTCCCTCACCTCGTCCCTCAACTACTTCGACTACCACCAGCAGACTCTGCCACTGGGCTGCCGCCGCTCCGACAG
CACCTTCCTCAATGTGGAGAGCCAGAACAGCCGCAACGCCGGCTCCAACCACATCTACCACCACACTTTCACGGGGCAG
AGCCCCCAGCAGCCTGACCTCATCATCAACGGGATGCCGCTGCCTGAGACTGAAAATTACTCCTTTGACTCCAACTACG
TGAACAGCAGAGCTCATTTAATAAAAAGCTCCACGTTCAAGGACCTGGAGGGAAACAGCCTGAAGGACAGCGGCCACGA
GGAGAGCGACCAGACTGACAGCGAGCACGATGTGCAGCGTGGCCTCTACTGCGACACGGCGGTCAATGACGTGCTCAAC
ACCAGCGTGCCCTCCATGGGCTCGCAGGGGCCCGAGCCAGATCAGAGCGAAGGATTTCATTGCAGGGAAGAATGCCGCA
TCCTGGGCCACTCAGACCGGTGCTGGATGCCCCGCAGCGCTGTCCCCAGCCGCACCAAGTCCCCCGAGCACAGCAGGAA
CGTCATCGCCCTCTCCATAGAAGCGACGGCGGTGGATGCGGAGCCTTACGCAGACTGTAGCGCCAAAAGGACCTTCGCC
ACTTTCGGCAAGGAGGGCGGTGAGCCGCCGGCCGAGGAGCGGCCCGGCAACCCCAAAGGCAAAAGAACGGTGGAGCCGG
CTGCCGGCAGCCCCAAGGTGAGCGGCGCCGTGC
CitationLin J, Wang C, Redies C Expression of delta-protocadherins in the spinal cord of the chicken embryo. J Comp Neurol. 2012 May 1;520(7):1509-31.
CopyrightCopyright © 2011 Wiley Periodicals, Inc.
CommentsThe cDNA template used to generate the probe was obtained by PCR as described in the paper.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
Dermomyotome
Notochord
Spinal Cord
 
19-24
stage 20
stage 24
stage 24
stage 24
stage 24
stage 24
stage 24
stage 24
stage 24
Dermomyotome
Sclerotome
Spinal Cord
Cdh7: blue
Cdh7: green
Higher magnification of area boxed in C.
Pax3: red
Pcdh10: green
Pcdh19: green
Pcdh19: red
mc, motorcolumn
me, meninges
ne, neuroepithelial layer
25-30
stage 29
stage 29
stage 30
stage 30
stage 30
stage 30
stage 30
stage 30
stage 30
stage 30
stage 30
stage 30
Blood Vessels
Spinal Cord
Cervical section of the spine.
Higher magnification of boxed area in E.
Higher magnification of boxed area in G.
Lumbar section of the spine.
Pc19: green fluorescence
Sacral section of the spine.
Thoracic section of the spine.
bv, blood vessel
lm, lateral motor column
me, meninges
31-36
stage 34
stage 34
stage 36
stage 36
stage 36
stage 36
Blood Vessels
Spinal Cord
Spinal Ganglia and Nerves
Higher magnification of boxed area in I.
Higher magnification of boxed area in K.
Pc19: green fluorescence
lm, lateral motor column
me, meninges
wm, white matter

Entry 2

GEISHA IdPCDH19.Lin.2013Data SourcePublication
Complete cDNA Template Probeshow
CCCGGGGGCCTACCTCCTCTCAGTCTCAGCAAGGGACCCTGACCTGGGCCTCAATGGCAGCGTCTCCTACCAGATTGTG
CCCTCCCAAGTCAGGGACATGCCTGTCTTCACTTATGTCTCCATCAACCCCAACTCTGGAGATATCTATGCCTTGAGGT
CCTTCAATCATGAACAGACCAAGGCCTTTGAGTTCAAAGTCTTGGCGAAAGATGGGGGCAATCCCTCTCTGCAGAGCAA
TGCCACTGTCAGGGTGATTGTCCTGGATGTCAACGACAACACGCCGGTGATCACGGCCCCACCGTTGGTCAATGGGACC
GCGGAGGTGTACATCCCCCGGAACGCAGGGGTTGGCTACTTGGTGACAGTGGTCAAGGCAGATGACTATGACGAGGGTG
AAAATGGCAGGCTTTCCTATGAAATGGTGGAAGGAGACAGAGGATTTTTTGAGATAGACCAGGTCAATGGAGAGATAAG
GACCACCAGAGCCTTTGGGGAGAATGCCAAGACAGCCTACGAGCTGATCGTGGTGGCTCACGACCATGGAAAAACATCC
CTGTCGGCCTCTGCCTTGATTTTGATATACCTGTCCCCAGCCCTGGATGCCCAGGAGTCCATAGGATCTGTTAACCTCT
CCCTGATTTTCATTATTGCCCTGGGGTCTATTGCGGCCATTCTTTTTGTCACCATGATCTTCGTGGCAGTAAAGTGCAA
AAGGGATAACAAGGAAATCAGGACCTATAACTGCAGAATCGCAGAGTACTCCTACGGGCATCAGAAGAAATCAAGCAAG
AAGAAGAAAATCAGCAAGAACGATATCCGCCTGGTTCCGCGCGACGTGGAGGAGACGGATAAAATGAACGTTGTGAGCT
GCTCCTCCCTCACCTCGTCCCTCAACTACTTCGACTACCACCAGCAGACTCTGCCACTGGGCTGCCGCCGCTCCGACAG
CACCTTCCTCAATGTGGAGAGCCAGAACAGCCGCAACGCCGGCTCCAACCACATCTACCACCACACTTTCACGGGGCAG
AGCCCCCAGCAGCCTGACCTCATCATCAACGGGATGCCGCTGCCTGAGACTGAAAATTACTCCTTTGACTCCAACTACG
TGAACAGCAGAGCTCATTTAATAAAAAGCTCCACGTTCAAGGACCTGGAGGGAAACAGCCTGAAGGACAGCGGCCACGA
GGAGAGCGACCAGACTGACAGCGAGCACGATGTGCAGCGTGGCCTCTACTGCGACACGGCGGTCAATGACGTGCTCAAC
ACCAGCGTGCCCTCCATGGGCTCGCAGGGGCCCGAGCCAGATCAGAGCGAAGGATTTCATTGCAGGGAAGAATGCCGCA
TCCTGGGCCACTCAGACCGGTGCTGGATGCCCCGCAGCGCTGTCCCCAGCCGCACCAAGTCCCCCGAGCACAGCAGGAA
CGTCATCGCCCTCTCCATAGAAGCGACGGCGGTGGATGCGGAGCCTTACGCAGACTGTAGCGCCAAAAGGACCTTCGCC
ACTTTCGGCAAGGAGGGCGGTGAGCCGCCGGCCGAGGAGCGGCCCGGCAACCCCAAAGGCAAAAGAACGGTGGAGCCGG
CTGCCGGCAGCCCCAAGGTGAGCGGCGCCGTGC
CitationLin J, Wang C, Redies C. Expression of multiple delta-protocadherins during feather bud formation. Gene Expr Patterns. 2013 Mar-Apr;13(3-4):57-65. Epub 2013 Jan 11.. DIO: 10.1016/j.gep.2013.01.001.
CopyrightCopyright © 2013 Elsevier B.V. All rights reserved.
CommentsThe complete cDNA template sequence was obtained from the information in the publication as described in Lin et al. 2013.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-36
stage 34
stage 35
stage 35
stage 36
stage 36
stage 36
Blood Vessels
Surface Ectoderm
 
all
 
 
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.2405

Mouse

EmageMGI:2685563
EurexpressMGI:2685563
MGI GXDMGI:2685563

Frog

Xenbase1113171

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-4218
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