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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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ETV4
ETS variant 4

Gene

Official Symbol	ETV4
Official Full Name	ETS variant 4
CGNC ID	807
also known as	PEA3, ETS translocation variant 4\|ets domain protein\|ets variant gene 4 (E1A enhancer binding protein, E1AF), Pea3, Ets domain protein Pea 3, ETV4
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC

Sequence Information

Genomic
RNA	XM_418106
Polypeptide	XP_418106

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	2118	ENSG00000175832		MIM:600711
Mouse	18612	ENSMUSG00000017724	All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2)	MGI:99423
Xenopus	100486339, 399135			6051132
Zebrafish	30700	ENSDARG00000018303	ZDB-GENE-990415-71	ZFIN:ZDB-GENE-990415-71

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	395747
Ensembl Gene
KEGG	gga:395747

Entry 1

GEISHA Id	ETV4.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	TTATAAAAGCTTGCGGCCGCAGAATATGCCGCTCTCTTCGCTACTATTATG
Reverse cDNA Template Primer	GCTCTAGAAATTAACCCTCACTAAAGGTGCCCTGTGCTGGTTTTAGG	cDNA Template Length	1054
Complete cDNA Template Probe	show TTTTTTTAAAAAATTTGGCCGCAATATGCCGCTTTTTCGCTACTATTATGAAAAGGCATCATGCAGAAGGTGGCAGGGA ACGCTACGTCTACAAGTTTGTGTGTGAGCCCCGAGGCTCTGTTCTCTTGGCCTTCCCTGACAACCAGCGGCCAGCCCTG AAGGCAGAGCTGGAGAGGGCAGATCAGCGAGGAGGACACGGTGCCTCTGTCCCACCTGGATGAGAGCACTGCTTACCTG CCTGACCTTGGGAGCCTCCCCCCCGCAGCTCTATGGCAAAGGCTACACCTACTAGAGCTGCTGGAGCCGTGTGCCACCC TGATCGTGTATATAAGGAGATGTCTGGTTAGTAACCAAGCTGTATAGGTGTTTTCCCAGGCCAGCCTGGGGCTGCACAG AGCTATGATACCTGCTGTGGGCAGGAGAAGGGTTCAGGTCAATGTGTGGTTGGATAACCAGCAGGGGGTCAATGGGGCT GCTGGGTGCTGGTGGTGCCAACCCCATATCTGGCAGGATGGGACCACTCCTCAGTGTGAAGTCATCACCTGAGCAGGGC AGCTGTGGCTTCCCAGCATCACAGGTGGTCGCTGCCTCCAGCAGGAGCCCACCTACAGCATTCCTCCCCCCTTGGCAGA TGTGATGCCATCCTGCTTGGCTTCTTCTCACAGCTGGGGATGCTACAGCTGCTGCTGGCTGCCTTCCTCCAGTGCTGAC CCCCTGGGTATATTGCCCTCAGCCGGGGCAGCCCAACCTGTGCAGATTCACCTCCTCAGGGCCAACCTTCTCTTCTGCC CAGGAGAGCTGTGCCATGTGGCTGCAAACCAAATGCCTTTCCCCTGAATTGCTCTGTTGGCACTGAAAGTGCCTGTCCC GTACGTGCATGCTCCTGCATTGCCACCTCCTTGCCTGCAGCACCTCATGCCAGGGCTGCCAACATGTTCTTGAGCTGGG CAGCTGAAGGTGTGGGCCAGGGTGAAGCACTTCCCCGGTGCATGCCCTAAAACCAGCCAGGGCACCTTTATTGGGTTAA TTTTTTTAAAAAAAAA

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 5

stage 6

Epiblast
Hensen's Node
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Primitive Streak
Somites

7-12

stage 7

stage 8

stage 9

stage 10

stage 11

stage 12

Anterior Intestinal Portal
Ectoderm
Forebrain
Head Mesenchyme
Heart
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
Somites

HH 10-

13-18

stage 15

stage 16

Ear/Otic Placode
Forebrain
Head Mesenchyme
Heart
Lateral Plate Mesoderm
Midbrain
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Somites

Sections pending.

19-24

stage 21

stage 22

stage 23

Ear/Otic Placode
Eye
Forebrain
Heart
Leg
Limb Buds
Myotome
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Somites
Tail
Wing

Sections pending.

stage 25

Ear/Otic Placode
Eye
Head Mesenchyme
Hindbrain
Leg
Myotome
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Somites
Tail
Wing

Sections pending.

Entry 2

GEISHA Id	Pea3.Lunn.2007	Data Source	Publication
Complete cDNA Template Probe	show CCGAGCTCGTGAAGGCGGCGATGCGCCAATGGGAGGCCGCCCCCGGGCGCTCAACGGCCTGAACGGCCGCGCGGGCGGG GCTGCGTGGGGCTCCGCATGGGCCGGGAGTCGCCACCGGGTGCGCTCCGAGAGCCGGGAGCTCCGCGGCCGCGGAGGTA GCGCCCGGGCGGCAGGATGAAGGGGTACGTGGACCAGCAGGTGCCGTTCACTTTCCCCCAGCCGCCGCCGGGCCATGCG GGCTCCGGGTGCCGGACTCCGACGGGCGCTGCGAAGAGCCCCATGGAGCCGGGCTTGCTGCCGGCGCAGGATTCGGAAG ACCTCTTCCAGGACTTGAGCCAGTTCCAGGAGACTTGGCTGACAGAAGCTCAGGTTCCAGACAGCGATGAGCAATTTGT GCCTGACTTCCATTCAGAAAACCCTTTTCATAGTCCTCCTGCAAAGATTAAAAAGGAACCACAGAGTCCCTCCTCGGAC CCCACGCTGTCCTGCAACCACAAGCAGCCATTCCAGTACCGCAATGGAGAGCAGTGCCTTTATGCCAGTGCCTATGATC AACCCAGACCGGTTGGGATCAAATCCCCTGACCCAGGAACCCCAATCCAGTCACCGCTCCAGCAGTTCCCCAGACAGGA CAGGAACTTCCTGACCCCTTCAGGGCCACCCCACCCCACATCCAGCTGTGGATACCTCATTGAAAACAGCTCTGCCTAC CAGCCACCTGTGGAGATGTGCCACTCCTTCCCCTCCTCCCAGGGCATGGCCCAGGATGCTCCCATCGCCTACCAGCGCC CCATGTCTGAGCAATGCCTTCAGTTCCCCCCGCAGGGCTTCAAGCAGGAGTTCCATGACCCACAGTATGAGCAGGCGGG CAGCAGCTGCCAGTACCCAGCAGCCGTGGTCATCAAGCAGGAGCAGGTGGACTACATGTATGACTCAGGCTGCAGCTAT GACAAGCAGATGAGGCCCTTTGCTGACGATGTCTGCGTTGTTCCAGAAAAATTTGAAGCAGGTGACATCAAGCAGGAGG TCGGAGGGTACCGGGAGGGCCCTCCCTATCAGCGGAGGGGATCTCTCCAGCTCTGGCAGTTCCTTGTGGCTCTATTGGA TGATCCCACCAACTCCCACTTCATTGCCTGGACTGGAAGAGGGATGGAGTTCAAGCTGATTGAGCCAGAAGAGGTAGCC AGGCTGTGGGGCATCCAGAAGAACCGGCCAGCCATGAACTACGACAAGCTGAGCCGCTCTCTTCGCTACTATTATGAGA AAGGCATCATGCAGAAGGTGGCGGGGGAACGCTACGTCTACAAGTTTGTGTGTGAGCCCGAGGCTCTGTTCTCTCTGGC CTTCCCTGACAACCAGCGGCCGGCCCTGAAGGCAGAGCTGGAGAGGCAGATCAGCGAGGAGGACACGGTGCCTCTGTCC CACCTGGATGAGAGCACTGCTTACCTGCCTGACCTTGGGAGCCTCCCCCCGCAGCTCTATGGCAAAGGTTACACCTACT AGTGCTGCTGGAGCTGTGTGCCACCCTGATCGTGTATATAAGGAGATGTCTGGTTAGTAACCAAGCTGTATAGGTGTTT TCCCAGGCCAGCCTGGGGCTGCACAGAGCTATGATACCTGCTGAGGGCAGGAGAAGGGTTCAGGTCAATGTGTGGCTGG ATAACCAGCAGGGGGTCAATGGGGCTGCTGGGGGCTGGTGGTGCCAACCCCATATCTGGCAGGATGGGACCACTCCTCA GTGTGAAGTCATCACCTGAGCAGGGCAGCTGTGGCTTCCCAGCATCACAGGTGGTCGCTGCCTCCAGCAGGAGCCCACC TACAGCATTCCTCCCCCCTTGGCAGATGTGATGCCATCCTGCTTGGCTTCTTCTCACAGCTGGGGATGCTACAGCTGCT GCTGGCTGCCTTCCTCCAGTGCTGACCCCCTGGGTATATTGCCCTCAGCCAGGGCAGCCCAGACCTGTGCAGATTCACC TCCTCAGGGCCAACCTTCTCTTCTGCCCAGGAGAGCTGTGCCATGTGGCTGCAAACCAAATGCCTTCCCCTGAATTGCT CTGTTGGCACTGAGAAGTGCCTGTCCCGTATGTGCATGCTCCTGCATTGCCACCTCCTTGCCTGCAGCACCTCATGCCA GGGCTGCCACATGTTCTTGAGCTGGGCAGCTGAAGGTGTGGGCCAGGGTGAGAGCACTCCCACTGTGCATGGCCCTAAA ACCAGCACAGGGCAAGCACAGAGCTTCCTGATGTGCTGTGCTGGGTATGAGGGGAGTCAAATCAATGTCATAGCCTCTA CCACCAGGCCATATGTGTGGCATGGCTGTTCCAGTCTAGACAAGGGCTAGAACCGTCTCTAGGATCTTTGGAGGCTCAG GGACTTGGCTAGAAAATCACCTGAGGTGTGAAAAGAACCTGGGGGGGGGGGAGGCATTATGAATACACTCTACAAAGTA ACTTAAATCAGAGCTCTTAACATCTGAATTCAGACCCAACCTCTGCATGCGTTTACCTCTTTGAAGGAAAGTCTGAAGT GTTGGAAAGGCAGATATCTCTGCAGCCCGAAGCAGCACTTTAACTGTTTTTCCCCAGTAGTGAACACTTACAGTGGGCA CCACATCCCCGGGGAGAGGTGCTGTGCTTCTTAATTAGCTGCTCCAGCCCAGCGCCCATTGGGGTGAGGAGCTGCGTGG TGAATCTGTACCAAAACAGCCTCTTTCCTCCTTGACTGAAAGACCCATTCCGTCTGTGCTTCTGCCCTGCAGGGCTGGC AGCAGCCCCTCCTGGGGGGCTCAGGAGCAGCCCCTTCTGCTGCTGCCTTCTCATGCTCAGCCCTGGGCTTCCAGCCCTG CTGCCTCATCCCACTCTACCGCGTGCCTCCACTGCCCCAAAGTGATGGAGAAGGGGAACCCTGCTGTTGGTATAATCTG CCTTTACTATTTATGAGTGTAAAAAAAATACTATAATTAATAAATTGGTCTATGTCTTTG
Citation	Lunn JS, Fishwick KJ, Halley PA, Storey KG. A spatial and temporal map of FGF/Erk1/2 activity and response repertoires in the early chick embryo. Dev Biol. 2007 Feb 15;302(2):536-52. Epub 2006 Oct 14.
Copyright	Copyright © 2006 Elsevier Inc. All rights reserved.
Comments	Insufficient information in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_418106.2).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

1-3

stage 1

stage 3

Epiblast
Primitive Streak

Stage X

4-6

stage 4

stage 6

Hensen's Node
Hindbrain
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
Somites

Epressed in neural floor plate, precardiac mesoderm

7-10

stage 8

stage 10

Ectoderm
Forebrain
Hindbrain
Intermediate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites

Precardiac mesoderm
Undetectable in neural tube flanked by somites

Entry 3

GEISHA Id	PEA3.UAclone	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show CCGAGCTCGTGAAGGCGGCGATGCGCCAATGGGAGGCCGCCCCCGGGCGCTCAACGGCCTGAACGGCCGCGCGGGCGGG GCTGCGTGGGGCTCCGCATGGGCCGGGAGTCGCCACCGGGTGCGCTCCGAGAGCCGGGAGCTCCGCGGCCGCGGAGGTA GCGCCCGGGCGGCAGGATGAAGGGGTACGTGGACCAGCAGGTGCCGTTCACTTTCCCCCAGCCGCCGCCGGGCCATGCG GGCTCCGGGTGCCGGACTCCGACGGGCGCTGCGAAGAGCCCCATGGAGCCGGGCTTGCTGCCGGCGCAGGATTCGGAAG ACCTCTTCCAGGACTTGAGCCAGTTCCAGGAGACTTGGCTGACAGAAGCTCAGGTTCCAGACAGCGATGAGCAATTTGT GCCTGACTTCCATTCAGAAAACCCTTTTCATAGTCCTCCTGCAAAGATTAAAAAGGAACCACAGAGTCCCTCCTCGGAC CCCACGCTGTCCTGCAACCACAAGCAGCCATTCCAGTACCGCAATGGAGAGCAGTGCCTTTATGCCAGTGCCTATGATC AACCCAGACCGGTTGGGATCAAATCCCCTGACCCAGGAACCCCAATCCAGTCACCGCTCCAGCAGTTCCCCAGACAGGA CAGGAACTTCCTGACCCCTTCAGGGCCACCCCACCCCACATCCAGCTGTGGATACCTCATTGAAAACAGCTCTGCCTAC CAGCCACCTGTGGAGATGTGCCACTCCTTCCCCTCCTCCCAGGGCATGGCCCAGGATGCTCCCATCGCCTACCAGCGCC CCATGTCTGAGCAATGCCTTCAGTTCCCCCCGCAGGGCTTCAAGCAGGAGTTCCATGACCCACAGTATGAGCAGGCGGG CAGCAGCTGCCAGTACCCAGCAGCCGTGGTCATCAAGCAGGAGCAGGTGGACTACATGTATGACTCAGGCTGCAGCTAT GACAAGCAGATGAGGCCCTTTGCTGACGATGTCTGCGTTGTTCCAGAAAAATTTGAAGCAGGTGACATCAAGCAGGAGG TCGGAGGGTACCGGGAGGGCCCTCCCTATCAGCGGAGGGGATCTCTCCAGCTCTGGCAGTTCCTTGTGGCTCTATTGGA TGATCCCACCAACTCCCACTTCATTGCCTGGACTGGAAGAGGGATGGAGTTCAAGCTGATTGAGCCAGAAGAGGTAGCC AGGCTGTGGGGCATCCAGAAGAACCGGCCAGCCATGAACTACGACAAGCTGAGCCGCTCTCTTCGCTACTATTATGAGA AAGGCATCATGCAGAAGGTGGCGGGGGAACGCTACGTCTACAAGTTTGTGTGTGAGCCCGAGGCTCTGTTCTCTCTGGC CTTCCCTGACAACCAGCGGCCGGCCCTGAAGGCAGAGCTGGAGAGGCAGATCAGCGAGGAGGACACGGTGCCTCTGTCC CACCTGGATGAGAGCACTGCTTACCTGCCTGACCTTGGGAGCCTCCCCCCGCAGCTCTATGGCAAAGGTTACACCTACT AGTGCTGCTGGAGCTGTGTGCCACCCTGATCGTGTATATAAGGAGATGTCTGGTTAGTAACCAAGCTGTATAGGTGTTT TCCCAGGCCAGCCTGGGGCTGCACAGAGCTATGATACCTGCTGAGGGCAGGAGAAGGGTTCAGGTCAATGTGTGGCTGG ATAACCAGCAGGGGGTCAATGGGGCTGCTGGGGGCTGGTGGTGCCAACCCCATATCTGGCAGGATGGGACCACTCCTCA GTGTGAAGTCATCACCTGAGCAGGGCAGCTGTGGCTTCCCAGCATCACAGGTGGTCGCTGCCTCCAGCAGGAGCCCACC TACAGCATTCCTCCCCCCTTGGCAGATGTGATGCCATCCTGCTTGGCTTCTTCTCACAGCTGGGGATGCTACAGCTGCT GCTGGCTGCCTTCCTCCAGTGCTGACCCCCTGGGTATATTGCCCTCAGCCAGGGCAGCCCAGACCTGTGCAGATTCACC TCCTCAGGGCCAACCTTCTCTTCTGCCCAGGAGAGCTGTGCCATGTGGCTGCAAACCAAATGCCTTCCCCTGAATTGCT CTGTTGGCACTGAGAAGTGCCTGTCCCGTATGTGCATGCTCCTGCATTGCCACCTCCTTGCCTGCAGCACCTCATGCCA GGGCTGCCACATGTTCTTGAGCTGGGCAGCTGAAGGTGTGGGCCAGGGTGAGAGCACTCCCACTGTGCATGGCCCTAAA ACCAGCACAGGGCAAGCACAGAGCTTCCTGATGTGCTGTGCTGGGTATGAGGGGAGTCAAATCAATGTCATAGCCTCTA CCACCAGGCCATATGTGTGGCATGGCTGTTCCAGTCTAGACAAGGGCTAGAACCGTCTCTAGGATCTTTGGAGGCTCAG GGACTTGGCTAGAAAATCACCTGAGGTGTGAAAAGAACCTGGGGGGGGGGGAGGCATTATGAATACACTCTACAAAGTA ACTTAAATCAGAGCTCTTAACATCTGAATTCAGACCCAACCTCTGCATGCGTTTACCTCTTTGAAGGAAAGTCTGAAGT GTTGGAAAGGCAGATATCTCTGCAGCCCGAAGCAGCACTTTAACTGTTTTTCCCCAGTAGTGAACACTTACAGTGGGCA CCACATCCCCGGGGAGAGGTGCTGTGCTTCTTAATTAGCTGCTCCAGCCCAGCGCCCATTGGGGTGAGGAGCTGCGTGG TGAATCTGTACCAAAACAGCCTCTTTCCTCCTTGACTGAAAGACCCATTCCGTCTGTGCTTCTGCCCTGCAGGGCTGGC AGCAGCCCCTCCTGGGGGGCTCAGGAGCAGCCCCTTCTGCTGCTGCCTTCTCATGCTCAGCCCTGGGCTTCCAGCCCTG CTGCCTCATCCCACTCTACCGCGTGCCTCCACTGCCCCAAAGTGATGGAGAAGGGGAACCCTGCTGTTGGTATAATCTG CCTTTACTATTTATGAGTGTAAAAAAAATACTATAATTAATAAATTGGTCTATGTCTTTG

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-12

stage 12

Head Mesenchyme
Intermediate Mesoderm
Lateral Plate Mesoderm
Paraxial Mesoderm

13-18

stage 15

stage 18

Face Mesenchyme
Heart Tube
Intermediate Mesoderm
Lateral Plate Mesoderm
Limb Buds
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Somatopleure
Somites
Splanchnic Mesoderm
Surface Ectoderm
Tail
Wing

19-24

stage 24

Ear/Otic Placcode
Eye
Face Mesenchyme
Limb Buds
Pharyngeal Arches and Clefts
Somites

Entry 4

GEISHA Id	Pea3.McCabe.2006	Data Source	Publication
Complete cDNA Template Probe	show CCGAGCTCGTGAAGGCGGCGATGCGCCAATGGGAGGCCGCCCCCGGGCGCTCAACGGCCTGAACGGCCGCGCGGGCGGG GCTGCGTGGGGCTCCGCATGGGCCGGGAGTCGCCACCGGGTGCGCTCCGAGAGCCGGGAGCTCCGCGGCCGCGGAGGTA GCGCCCGGGCGGCAGGATGAAGGGGTACGTGGACCAGCAGGTGCCGTTCACTTTCCCCCAGCCGCCGCCGGGCCATGCG GGCTCCGGGTGCCGGACTCCGACGGGCGCTGCGAAGAGCCCCATGGAGCCGGGCTTGCTGCCGGCGCAGGATTCGGAAG ACCTCTTCCAGGACTTGAGCCAGTTCCAGGAGACTTGGCTGACAGAAGCTCAGGTTCCAGACAGCGATGAGCAATTTGT GCCTGACTTCCATTCAGAAAACCCTTTTCATAGTCCTCCTGCAAAGATTAAAAAGGAACCACAGAGTCCCTCCTCGGAC CCCACGCTGTCCTGCAACCACAAGCAGCCATTCCAGTACCGCAATGGAGAGCAGTGCCTTTATGCCAGTGCCTATGATC AACCCAGACCGGTTGGGATCAAATCCCCTGACCCAGGAACCCCAATCCAGTCACCGCTCCAGCAGTTCCCCAGACAGGA CAGGAACTTCCTGACCCCTTCAGGGCCACCCCACCCCACATCCAGCTGTGGATACCTCATTGAAAACAGCTCTGCCTAC CAGCCACCTGTGGAGATGTGCCACTCCTTCCCCTCCTCCCAGGGCATGGCCCAGGATGCTCCCATCGCCTACCAGCGCC CCATGTCTGAGCAATGCCTTCAGTTCCCCCCGCAGGGCTTCAAGCAGGAGTTCCATGACCCACAGTATGAGCAGGCGGG CAGCAGCTGCCAGTACCCAGCAGCCGTGGTCATCAAGCAGGAGCAGGTGGACTACATGTATGACTCAGGCTGCAGCTAT GACAAGCAGATGAGGCCCTTTGCTGACGATGTCTGCGTTGTTCCAGAAAAATTTGAAGCAGGTGACATCAAGCAGGAGG TCGGAGGGTACCGGGAGGGCCCTCCCTATCAGCGGAGGGGATCTCTCCAGCTCTGGCAGTTCCTTGTGGCTCTATTGGA TGATCCCACCAACTCCCACTTCATTGCCTGGACTGGAAGAGGGATGGAGTTCAAGCTGATTGAGCCAGAAGAGGTAGCC AGGCTGTGGGGCATCCAGAAGAACCGGCCAGCCATGAACTACGACAAGCTGAGCCGCTCTCTTCGCTACTATTATGAGA AAGGCATCATGCAGAAGGTGGCGGGGGAACGCTACGTCTACAAGTTTGTGTGTGAGCCCGAGGCTCTGTTCTCTCTGGC CTTCCCTGACAACCAGCGGCCGGCCCTGAAGGCAGAGCTGGAGAGGCAGATCAGCGAGGAGGACACGGTGCCTCTGTCC CACCTGGATGAGAGCACTGCTTACCTGCCTGACCTTGGGAGCCTCCCCCCGCAGCTCTATGGCAAAGGTTACACCTACT AGTGCTGCTGGAGCTGTGTGCCACCCTGATCGTGTATATAAGGAGATGTCTGGTTAGTAACCAAGCTGTATAGGTGTTT TCCCAGGCCAGCCTGGGGCTGCACAGAGCTATGATACCTGCTGAGGGCAGGAGAAGGGTTCAGGTCAATGTGTGGCTGG ATAACCAGCAGGGGGTCAATGGGGCTGCTGGGGGCTGGTGGTGCCAACCCCATATCTGGCAGGATGGGACCACTCCTCA GTGTGAAGTCATCACCTGAGCAGGGCAGCTGTGGCTTCCCAGCATCACAGGTGGTCGCTGCCTCCAGCAGGAGCCCACC TACAGCATTCCTCCCCCCTTGGCAGATGTGATGCCATCCTGCTTGGCTTCTTCTCACAGCTGGGGATGCTACAGCTGCT GCTGGCTGCCTTCCTCCAGTGCTGACCCCCTGGGTATATTGCCCTCAGCCAGGGCAGCCCAGACCTGTGCAGATTCACC TCCTCAGGGCCAACCTTCTCTTCTGCCCAGGAGAGCTGTGCCATGTGGCTGCAAACCAAATGCCTTCCCCTGAATTGCT CTGTTGGCACTGAGAAGTGCCTGTCCCGTATGTGCATGCTCCTGCATTGCCACCTCCTTGCCTGCAGCACCTCATGCCA GGGCTGCCACATGTTCTTGAGCTGGGCAGCTGAAGGTGTGGGCCAGGGTGAGAGCACTCCCACTGTGCATGGCCCTAAA ACCAGCACAGGGCAAGCACAGAGCTTCCTGATGTGCTGTGCTGGGTATGAGGGGAGTCAAATCAATGTCATAGCCTCTA CCACCAGGCCATATGTGTGGCATGGCTGTTCCAGTCTAGACAAGGGCTAGAACCGTCTCTAGGATCTTTGGAGGCTCAG GGACTTGGCTAGAAAATCACCTGAGGTGTGAAAAGAACCTGGGGGGGGGGGAGGCATTATGAATACACTCTACAAAGTA ACTTAAATCAGAGCTCTTAACATCTGAATTCAGACCCAACCTCTGCATGCGTTTACCTCTTTGAAGGAAAGTCTGAAGT GTTGGAAAGGCAGATATCTCTGCAGCCCGAAGCAGCACTTTAACTGTTTTTCCCCAGTAGTGAACACTTACAGTGGGCA CCACATCCCCGGGGAGAGGTGCTGTGCTTCTTAATTAGCTGCTCCAGCCCAGCGCCCATTGGGGTGAGGAGCTGCGTGG TGAATCTGTACCAAAACAGCCTCTTTCCTCCTTGACTGAAAGACCCATTCCGTCTGTGCTTCTGCCCTGCAGGGCTGGC AGCAGCCCCTCCTGGGGGGCTCAGGAGCAGCCCCTTCTGCTGCTGCCTTCTCATGCTCAGCCCTGGGCTTCCAGCCCTG CTGCCTCATCCCACTCTACCGCGTGCCTCCACTGCCCCAAAGTGATGGAGAAGGGGAACCCTGCTGTTGGTATAATCTG CCTTTACTATTTATGAGTGTAAAAAAAATACTATAATTAATAAATTGGTCTATGTCTTTG
Citation	McCabe KL, McGuire C, Reh TA. Pea3 expression is regulated by FGF signaling in developing retina. Dev Dyn. 2006 Feb;235(2):327-35.
Copyright	Copyright © 2006 Wiley-Liss, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI XM_418106.2

Stage

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Location (click to highlight)

Comments (click to highlight)

19-24

stage 23

Lens
Retina

stage 25

Lens
Retina

Entry 5

GEISHA Id	Pea3.Brent.2004	Data Source	Publication
Complete cDNA Template Probe	show CCGAGCTCGTGAAGGCGGCGATGCGCCAATGGGAGGCCGCCCCCGGGCGCTCAACGGCCTGAACGGCCGCGCGGGCGGG GCTGCGTGGGGCTCCGCATGGGCCGGGAGTCGCCACCGGGTGCGCTCCGAGAGCCGGGAGCTCCGCGGCCGCGGAGGTA GCGCCCGGGCGGCAGGATGAAGGGGTACGTGGACCAGCAGGTGCCGTTCACTTTCCCCCAGCCGCCGCCGGGCCATGCG GGCTCCGGGTGCCGGACTCCGACGGGCGCTGCGAAGAGCCCCATGGAGCCGGGCTTGCTGCCGGCGCAGGATTCGGAAG ACCTCTTCCAGGACTTGAGCCAGTTCCAGGAGACTTGGCTGACAGAAGCTCAGGTTCCAGACAGCGATGAGCAATTTGT GCCTGACTTCCATTCAGAAAACCCTTTTCATAGTCCTCCTGCAAAGATTAAAAAGGAACCACAGAGTCCCTCCTCGGAC CCCACGCTGTCCTGCAACCACAAGCAGCCATTCCAGTACCGCAATGGAGAGCAGTGCCTTTATGCCAGTGCCTATGATC AACCCAGACCGGTTGGGATCAAATCCCCTGACCCAGGAACCCCAATCCAGTCACCGCTCCAGCAGTTCCCCAGACAGGA CAGGAACTTCCTGACCCCTTCAGGGCCACCCCACCCCACATCCAGCTGTGGATACCTCATTGAAAACAGCTCTGCCTAC CAGCCACCTGTGGAGATGTGCCACTCCTTCCCCTCCTCCCAGGGCATGGCCCAGGATGCTCCCATCGCCTACCAGCGCC CCATGTCTGAGCAATGCCTTCAGTTCCCCCCGCAGGGCTTCAAGCAGGAGTTCCATGACCCACAGTATGAGCAGGCGGG CAGCAGCTGCCAGTACCCAGCAGCCGTGGTCATCAAGCAGGAGCAGGTGGACTACATGTATGACTCAGGCTGCAGCTAT GACAAGCAGATGAGGCCCTTTGCTGACGATGTCTGCGTTGTTCCAGAAAAATTTGAAGCAGGTGACATCAAGCAGGAGG TCGGAGGGTACCGGGAGGGCCCTCCCTATCAGCGGAGGGGATCTCTCCAGCTCTGGCAGTTCCTTGTGGCTCTATTGGA TGATCCCACCAACTCCCACTTCATTGCCTGGACTGGAAGAGGGATGGAGTTCAAGCTGATTGAGCCAGAAGAGGTAGCC AGGCTGTGGGGCATCCAGAAGAACCGGCCAGCCATGAACTACGACAAGCTGAGCCGCTCTCTTCGCTACTATTATGAGA AAGGCATCATGCAGAAGGTGGCGGGGGAACGCTACGTCTACAAGTTTGTGTGTGAGCCCGAGGCTCTGTTCTCTCTGGC CTTCCCTGACAACCAGCGGCCGGCCCTGAAGGCAGAGCTGGAGAGGCAGATCAGCGAGGAGGACACGGTGCCTCTGTCC CACCTGGATGAGAGCACTGCTTACCTGCCTGACCTTGGGAGCCTCCCCCCGCAGCTCTATGGCAAAGGTTACACCTACT AGTGCTGCTGGAGCTGTGTGCCACCCTGATCGTGTATATAAGGAGATGTCTGGTTAGTAACCAAGCTGTATAGGTGTTT TCCCAGGCCAGCCTGGGGCTGCACAGAGCTATGATACCTGCTGAGGGCAGGAGAAGGGTTCAGGTCAATGTGTGGCTGG ATAACCAGCAGGGGGTCAATGGGGCTGCTGGGGGCTGGTGGTGCCAACCCCATATCTGGCAGGATGGGACCACTCCTCA GTGTGAAGTCATCACCTGAGCAGGGCAGCTGTGGCTTCCCAGCATCACAGGTGGTCGCTGCCTCCAGCAGGAGCCCACC TACAGCATTCCTCCCCCCTTGGCAGATGTGATGCCATCCTGCTTGGCTTCTTCTCACAGCTGGGGATGCTACAGCTGCT GCTGGCTGCCTTCCTCCAGTGCTGACCCCCTGGGTATATTGCCCTCAGCCAGGGCAGCCCAGACCTGTGCAGATTCACC TCCTCAGGGCCAACCTTCTCTTCTGCCCAGGAGAGCTGTGCCATGTGGCTGCAAACCAAATGCCTTCCCCTGAATTGCT CTGTTGGCACTGAGAAGTGCCTGTCCCGTATGTGCATGCTCCTGCATTGCCACCTCCTTGCCTGCAGCACCTCATGCCA GGGCTGCCACATGTTCTTGAGCTGGGCAGCTGAAGGTGTGGGCCAGGGTGAGAGCACTCCCACTGTGCATGGCCCTAAA ACCAGCACAGGGCAAGCACAGAGCTTCCTGATGTGCTGTGCTGGGTATGAGGGGAGTCAAATCAATGTCATAGCCTCTA CCACCAGGCCATATGTGTGGCATGGCTGTTCCAGTCTAGACAAGGGCTAGAACCGTCTCTAGGATCTTTGGAGGCTCAG GGACTTGGCTAGAAAATCACCTGAGGTGTGAAAAGAACCTGGGGGGGGGGGAGGCATTATGAATACACTCTACAAAGTA ACTTAAATCAGAGCTCTTAACATCTGAATTCAGACCCAACCTCTGCATGCGTTTACCTCTTTGAAGGAAAGTCTGAAGT GTTGGAAAGGCAGATATCTCTGCAGCCCGAAGCAGCACTTTAACTGTTTTTCCCCAGTAGTGAACACTTACAGTGGGCA CCACATCCCCGGGGAGAGGTGCTGTGCTTCTTAATTAGCTGCTCCAGCCCAGCGCCCATTGGGGTGAGGAGCTGCGTGG TGAATCTGTACCAAAACAGCCTCTTTCCTCCTTGACTGAAAGACCCATTCCGTCTGTGCTTCTGCCCTGCAGGGCTGGC AGCAGCCCCTCCTGGGGGGCTCAGGAGCAGCCCCTTCTGCTGCTGCCTTCTCATGCTCAGCCCTGGGCTTCCAGCCCTG CTGCCTCATCCCACTCTACCGCGTGCCTCCACTGCCCCAAAGTGATGGAGAAGGGGAACCCTGCTGTTGGTATAATCTG CCTTTACTATTTATGAGTGTAAAAAAAATACTATAATTAATAAATTGGTCTATGTCTTTG
Citation	Brent AE, Tabin CJ. FGF acts directly on the somitic tendon progenitors through the Ets transcription factors Pea3 and Erm to regulate scleraxis expression. Development. 2004 Aug;131(16):3885-96. Epub 2004 Jul 14.
Copyright	This material is protected by copyright. The Company of Biologists' (publishers of Development) hold an Exclusive License obtained from the authors, who retain copyright.
Comments	Authors said probe for "chick Pea3 (RT-PCR product using primers 5′ ACGTCTAGAGTGCATAATAACCATAGG 3′ and 5′ ACGGAATTCCTAGTAGGTGTAGCCTTTGCC 3′)". As these sequences were not present in the current mRNA listed for this gene, probe sequence posted here is from NCBI Acc # XM_418106.2.

Stage

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Location (click to highlight)

Comments (click to highlight)

19-20

stage 20

Dermomyotome
Limb Buds

Entry 6

GEISHA Id	PEA3.Firnberg.2002	Data Source	Publication
Complete cDNA Template Probe	show CCGAGCTCGTGAAGGCGGCGATGCGCCAATGGGAGGCCGCCCCCGGGCGCTCAACGGCCTGAACGGCCGCGCGGGCGGG GCTGCGTGGGGCTCCGCATGGGCCGGGAGTCGCCACCGGGTGCGCTCCGAGAGCCGGGAGCTCCGCGGCCGCGGAGGTA GCGCCCGGGCGGCAGGATGAAGGGGTACGTGGACCAGCAGGTGCCGTTCACTTTCCCCCAGCCGCCGCCGGGCCATGCG GGCTCCGGGTGCCGGACTCCGACGGGCGCTGCGAAGAGCCCCATGGAGCCGGGCTTGCTGCCGGCGCAGGATTCGGAAG ACCTCTTCCAGGACTTGAGCCAGTTCCAGGAGACTTGGCTGACAGAAGCTCAGGTTCCAGACAGCGATGAGCAATTTGT GCCTGACTTCCATTCAGAAAACCCTTTTCATAGTCCTCCTGCAAAGATTAAAAAGGAACCACAGAGTCCCTCCTCGGAC CCCACGCTGTCCTGCAACCACAAGCAGCCATTCCAGTACCGCAATGGAGAGCAGTGCCTTTATGCCAGTGCCTATGATC AACCCAGACCGGTTGGGATCAAATCCCCTGACCCAGGAACCCCAATCCAGTCACCGCTCCAGCAGTTCCCCAGACAGGA CAGGAACTTCCTGACCCCTTCAGGGCCACCCCACCCCACATCCAGCTGTGGATACCTCATTGAAAACAGCTCTGCCTAC CAGCCACCTGTGGAGATGTGCCACTCCTTCCCCTCCTCCCAGGGCATGGCCCAGGATGCTCCCATCGCCTACCAGCGCC CCATGTCTGAGCAATGCCTTCAGTTCCCCCCGCAGGGCTTCAAGCAGGAGTTCCATGACCCACAGTATGAGCAGGCGGG CAGCAGCTGCCAGTACCCAGCAGCCGTGGTCATCAAGCAGGAGCAGGTGGACTACATGTATGACTCAGGCTGCAGCTAT GACAAGCAGATGAGGCCCTTTGCTGACGATGTCTGCGTTGTTCCAGAAAAATTTGAAGCAGGTGACATCAAGCAGGAGG TCGGAGGGTACCGGGAGGGCCCTCCCTATCAGCGGAGGGGATCTCTCCAGCTCTGGCAGTTCCTTGTGGCTCTATTGGA TGATCCCACCAACTCCCACTTCATTGCCTGGACTGGAAGAGGGATGGAGTTCAAGCTGATTGAGCCAGAAGAGGTAGCC AGGCTGTGGGGCATCCAGAAGAACCGGCCAGCCATGAACTACGACAAGCTGAGCCGCTCTCTTCGCTACTATTATGAGA AAGGCATCATGCAGAAGGTGGCGGGGGAACGCTACGTCTACAAGTTTGTGTGTGAGCCCGAGGCTCTGTTCTCTCTGGC CTTCCCTGACAACCAGCGGCCGGCCCTGAAGGCAGAGCTGGAGAGGCAGATCAGCGAGGAGGACACGGTGCCTCTGTCC CACCTGGATGAGAGCACTGCTTACCTGCCTGACCTTGGGAGCCTCCCCCCGCAGCTCTATGGCAAAGGTTACACCTACT AGTGCTGCTGGAGCTGTGTGCCACCCTGATCGTGTATATAAGGAGATGTCTGGTTAGTAACCAAGCTGTATAGGTGTTT TCCCAGGCCAGCCTGGGGCTGCACAGAGCTATGATACCTGCTGAGGGCAGGAGAAGGGTTCAGGTCAATGTGTGGCTGG ATAACCAGCAGGGGGTCAATGGGGCTGCTGGGGGCTGGTGGTGCCAACCCCATATCTGGCAGGATGGGACCACTCCTCA GTGTGAAGTCATCACCTGAGCAGGGCAGCTGTGGCTTCCCAGCATCACAGGTGGTCGCTGCCTCCAGCAGGAGCCCACC TACAGCATTCCTCCCCCCTTGGCAGATGTGATGCCATCCTGCTTGGCTTCTTCTCACAGCTGGGGATGCTACAGCTGCT GCTGGCTGCCTTCCTCCAGTGCTGACCCCCTGGGTATATTGCCCTCAGCCAGGGCAGCCCAGACCTGTGCAGATTCACC TCCTCAGGGCCAACCTTCTCTTCTGCCCAGGAGAGCTGTGCCATGTGGCTGCAAACCAAATGCCTTCCCCTGAATTGCT CTGTTGGCACTGAGAAGTGCCTGTCCCGTATGTGCATGCTCCTGCATTGCCACCTCCTTGCCTGCAGCACCTCATGCCA GGGCTGCCACATGTTCTTGAGCTGGGCAGCTGAAGGTGTGGGCCAGGGTGAGAGCACTCCCACTGTGCATGGCCCTAAA ACCAGCACAGGGCAAGCACAGAGCTTCCTGATGTGCTGTGCTGGGTATGAGGGGAGTCAAATCAATGTCATAGCCTCTA CCACCAGGCCATATGTGTGGCATGGCTGTTCCAGTCTAGACAAGGGCTAGAACCGTCTCTAGGATCTTTGGAGGCTCAG GGACTTGGCTAGAAAATCACCTGAGGTGTGAAAAGAACCTGGGGGGGGGGGAGGCATTATGAATACACTCTACAAAGTA ACTTAAATCAGAGCTCTTAACATCTGAATTCAGACCCAACCTCTGCATGCGTTTACCTCTTTGAAGGAAAGTCTGAAGT GTTGGAAAGGCAGATATCTCTGCAGCCCGAAGCAGCACTTTAACTGTTTTTCCCCAGTAGTGAACACTTACAGTGGGCA CCACATCCCCGGGGAGAGGTGCTGTGCTTCTTAATTAGCTGCTCCAGCCCAGCGCCCATTGGGGTGAGGAGCTGCGTGG TGAATCTGTACCAAAACAGCCTCTTTCCTCCTTGACTGAAAGACCCATTCCGTCTGTGCTTCTGCCCTGCAGGGCTGGC AGCAGCCCCTCCTGGGGGGCTCAGGAGCAGCCCCTTCTGCTGCTGCCTTCTCATGCTCAGCCCTGGGCTTCCAGCCCTG CTGCCTCATCCCACTCTACCGCGTGCCTCCACTGCCCCAAAGTGATGGAGAAGGGGAACCCTGCTGTTGGTATAATCTG CCTTTACTATTTATGAGTGTAAAAAAAATACTATAATTAATAAATTGGTCTATGTCTTTG
Citation	Firnberg N, Neubüser A (2005).FGF signaling regulates expression of Tbx2, Erm, Pea3, and Pax3 in the early nasal region. Dev Biol. 2002 Jul 15;247(2):237-50.
Copyright	"Reprinted from Developmental Biology, 247(2), Firnberg N, Neubüser A, FGF signaling regulates expression of Tbx2, Erm, Pea3, and Pax3 in the early nasal region, 237-50., Copyright (2002), with permission from Elsevier". Copyright © (2002) Elsevier B.V. All rights reserved.
Comments	According to authors, "The plasmids used to prepare the antisense riboprobes employed in this study have previously been described (refs)." As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #XM_418106.2).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

13-18

stage 18

Face Mesenchyme
Forebrain

19-24

stage 24

Face Mesenchyme
Forebrain

31-44

stage 44

Ectoderm
Face Mesenchyme
Forebrain

Entry 7

GEISHA Id	PEA3.Blentic.2008	Data Source	Publication
Complete cDNA Template Probe	show GTGCATAATAACCATAGGATTGTAACGCTCCAATATCTGTTTGACTCCCCCAGTGCCTATGATCAACCCAGACCGGTTG GGATCAAATCCCCTGACCCAGGAACCCCAATCCAGTCACCGTTCCAGCAGTTCCCCAGACAGGACAGGAACTTCCTGAC CCCTTCAGGGCCACCCCACCCCACATCCAGCTGGGGATACCTCATTGAAAACAGCTCTGCCTACCAGGCACCTGTGGAG ATGTGCCACTCCTTCCACTCCTCCCAGGGCATGGCCCAGGATGCTCCCATCGTCTACCAGCGCCCCATGTCTGAGCAAT GCCTTCAGTGCCCCCCGCAGGGCTTCAAGCAGGAGTTTCATGACCCACAGTATGAGCAGGCGGGCAGGAGCTGCCAGTA CCCAGCAGCCGTGGTCATCAAGCAGGAGCAGGTGGACTACATGTATGACTCAGGCTGCAGCTATGACAAGCAGATGAGG CCCTTTGCTGACGATGTCTGCGTTGTTCCAGAAAAATTTGAAGGTGACATCAAGCAGGAGGTCGGAGGGTACCGGGAGG GCCCTCCCTATCAGCGGAGGGGATCTCTCCAGCTCTGGCAGTTCCTTGTGGCTCTATTGGATGATCCCACCAACTCCCA CTTCATTGCCTGGACTGGAAGAGGGATGGAGTTCAAGCTGATTGAGCCAGAAGAGGTAGCCAGGCTGTGGGGCATCCAG AAGAACCGGCCAGCCATGAACTACGACAAGCTGAGCCGCTCTCTTCGCTACTATTATGAGAAAGGCATCATGCAGAAGG TGGCAGGGGAACGCTACGTCTACAAGTTTGTGTGTGAGCCCGAGGCTCTGTTCTCTCTGGCCTTCCCTGACAACCAGCG GCCGGCCCTGAAGGCAGAGCTGGAGAGGCAGATCAGCGAGGAGGACACGGTGCCTCTGTCCCACCTGGATGAGAGCACT GCTTACCTGCCTGACCTTGGGAGCCTCCCCCCGCAGCTCTATGGCAAAGGCTACACCTACTAGAGCTGCTGGAGCCGTG TGCCACCTGATCGTGTATATAAGGAGATGTCTGGTTAGTAACCAAGCTGTATAGGTGTTTTCCCAGGCCAGCCTGGGGC TGCACAGAGCTATGATACCTGCTGTGGGCAGGAGAAGGGTTCAGGTCAATGTGTGGTTGGATAACCAGCAGGGGGTCAA TGGGGCTGCTGGGTGCTGGTGGTGCCAACCCCATATCTGGCAGGATGGGACCACTCCTCAGTGTGAAGTCATCACCTGA GCAGGGCAGCTGTGGCTTCCCAGCATCACAGGTGGTCGCTGCCTCCAGCAGGAGCCCACCTACAGCATTCCTCCCCCCT TGGCAGATGTGATGCCATCCTGCTTGGCTTCTTCTCACAGCTGGGGATGCTACAGCTGCTGCTGGCTGCCTTCCTCCAG TGCTGACCCCCTGGGTATATTGCCCTCAGCCGGGGCAGCCCAGACCTGTGCAGATTCACCTCCTCAGGGCCAACCTTCT CTTCTGCCCAGGAGAGCTGTGCCATGTGGCTGCAAACCAAATGCCTTCCCCTGAATTGCTCTGTTGGCACTGAGAAGTG CCTGTCCCGTACGTGCATGCTCCTGCATTGCCACCTCCTTGCCTGCAGCACCTCATGCCAGGGCTGCCACATGTTCTTG AGCTGGGCAGCTGAAGGTGTGGGCCAGGGTGAGAGCACTCCCACTGTGCATGGCCCTAAAACCAGCACAGGGCAAGCAC AGAGCTTCCAGATGTGCTGTGCTGGGTATGAGGGGAGTCAAATCAATGTCATAGCCTCTACCACCAGGCCATATGTGTG GCATGGCTGTTCCAGCCTAGACAAGGGCTAGAACCATCTCTAGGATCTTTGGAGGCTCAGGGACTTGGCTAGAAAATCA CCTGAGGTGTGAAAAGAACCTGGGGGGGGGGAGGCATTATGAATACACTCTAAAAAGTAACTTAAATCGGAGCTCTTAA CATCTGAATTCAGACCCAACCTCTGCATGCGTTTACCTCTTTGAAGGAAAGTCTGAAGTGTTGGAAAGGCAGATATCTC TGCAGCCTGAAGCAGCACTTTAACTGTTTTTCCCCAGTAGTGAACATTTACAGTGGGCACCACATCCCCGGGGAGAGGT GCTGTGCTTCTTAATTAGCTGCTCCAGCCCAGCGCCCATTGGGGTGAGGAGCTGCGTGGTGAATCTGTACCAAAACAGC CTCTTTCCTCCTTGACTGAAAGACCCATTCCGTCTGTGCTTCTGCCCTGCAGGGCTGGCAGCAGCCCCTCCTGGGGGGC TCAGGAGCAGCCCCCTCTGCTGCTGCCTTCTCATGCTCAGCCCTGGGCTTCCAGCCCTGCTGCCTCATCCCACTCTACC GCGTGCCTCCACTGCCCCAAAGTGATGGAGAAGGGGAACCCTGCTGTTGGTATAATCTGCCTTTACTATTTATGAGTGT AAAAAAAATACTATAATTAATAAATTGGTCTATGTCTTTGAAAAAAAAANAAAAAAAAA
Citation	Blentic A, Tandon P, Payton S, Walshe J, Carney T, Kelsh RN, Mason I, Graham A. The emergence of ectomesenchyme. Dev Dyn. 2008 Mar;237(3):592-601.
Copyright	Copyright © 2008 John Wiley & Sons, Inc. All Rights Reserved.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #AF075708.1 ).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-11

stage 11

Anterior Neuropore
Ear/Otic Placode
Hindbrain
Isthmus/MHB

Entry 8

GEISHA Id	PEA3.Ferrer-Vaquer.2008	Data Source	Publication
Complete cDNA Template Probe	show GTGCATAATAACCATAGGATTGTAACGCTCCAATATCTGTTTGACTCCCCCAGTGCCTATGATCAACCCAGACCGGTTG GGATCAAATCCCCTGACCCAGGAACCCCAATCCAGTCACCGTTCCAGCAGTTCCCCAGACAGGACAGGAACTTCCTGAC CCCTTCAGGGCCACCCCACCCCACATCCAGCTGGGGATACCTCATTGAAAACAGCTCTGCCTACCAGGCACCTGTGGAG ATGTGCCACTCCTTCCACTCCTCCCAGGGCATGGCCCAGGATGCTCCCATCGTCTACCAGCGCCCCATGTCTGAGCAAT GCCTTCAGTGCCCCCCGCAGGGCTTCAAGCAGGAGTTTCATGACCCACAGTATGAGCAGGCGGGCAGGAGCTGCCAGTA CCCAGCAGCCGTGGTCATCAAGCAGGAGCAGGTGGACTACATGTATGACTCAGGCTGCAGCTATGACAAGCAGATGAGG CCCTTTGCTGACGATGTCTGCGTTGTTCCAGAAAAATTTGAAGGTGACATCAAGCAGGAGGTCGGAGGGTACCGGGAGG GCCCTCCCTATCAGCGGAGGGGATCTCTCCAGCTCTGGCAGTTCCTTGTGGCTCTATTGGATGATCCCACCAACTCCCA CTTCATTGCCTGGACTGGAAGAGGGATGGAGTTCAAGCTGATTGAGCCAGAAGAGGTAGCCAGGCTGTGGGGCATCCAG AAGAACCGGCCAGCCATGAACTACGACAAGCTGAGCCGCTCTCTTCGCTACTATTATGAGAAAGGCATCATGCAGAAGG TGGCAGGGGAACGCTACGTCTACAAGTTTGTGTGTGAGCCCGAGGCTCTGTTCTCTCTGGCCTTCCCTGACAACCAGCG GCCGGCCCTGAAGGCAGAGCTGGAGAGGCAGATCAGCGAGGAGGACACGGTGCCTCTGTCCCACCTGGATGAGAGCACT GCTTACCTGCCTGACCTTGGGAGCCTCCCCCCGCAGCTCTATGGCAAAGGCTACACCTACTAGAGCTGCTGGAGCCGTG TGCCACCTGATCGTGTATATAAGGAGATGTCTGGTTAGTAACCAAGCTGTATAGGTGTTTTCCCAGGCCAGCCTGGGGC TGCACAGAGCTATGATACCTGCTGTGGGCAGGAGAAGGGTTCAGGTCAATGTGTGGTTGGATAACCAGCAGGGGGTCAA TGGGGCTGCTGGGTGCTGGTGGTGCCAACCCCATATCTGGCAGGATGGGACCACTCCTCAGTGTGAAGTCATCACCTGA GCAGGGCAGCTGTGGCTTCCCAGCATCACAGGTGGTCGCTGCCTCCAGCAGGAGCCCACCTACAGCATTCCTCCCCCCT TGGCAGATGTGATGCCATCCTGCTTGGCTTCTTCTCACAGCTGGGGATGCTACAGCTGCTGCTGGCTGCCTTCCTCCAG TGCTGACCCCCTGGGTATATTGCCCTCAGCCGGGGCAGCCCAGACCTGTGCAGATTCACCTCCTCAGGGCCAACCTTCT CTTCTGCCCAGGAGAGCTGTGCCATGTGGCTGCAAACCAAATGCCTTCCCCTGAATTGCTCTGTTGGCACTGAGAAGTG CCTGTCCCGTACGTGCATGCTCCTGCATTGCCACCTCCTTGCCTGCAGCACCTCATGCCAGGGCTGCCACATGTTCTTG AGCTGGGCAGCTGAAGGTGTGGGCCAGGGTGAGAGCACTCCCACTGTGCATGGCCCTAAAACCAGCACAGGGCAAGCAC AGAGCTTCCAGATGTGCTGTGCTGGGTATGAGGGGAGTCAAATCAATGTCATAGCCTCTACCACCAGGCCATATGTGTG GCATGGCTGTTCCAGCCTAGACAAGGGCTAGAACCATCTCTAGGATCTTTGGAGGCTCAGGGACTTGGCTAGAAAATCA CCTGAGGTGTGAAAAGAACCTGGGGGGGGGGAGGCATTATGAATACACTCTAAAAAGTAACTTAAATCGGAGCTCTTAA CATCTGAATTCAGACCCAACCTCTGCATGCGTTTACCTCTTTGAAGGAAAGTCTGAAGTGTTGGAAAGGCAGATATCTC TGCAGCCTGAAGCAGCACTTTAACTGTTTTTCCCCAGTAGTGAACATTTACAGTGGGCACCACATCCCCGGGGAGAGGT GCTGTGCTTCTTAATTAGCTGCTCCAGCCCAGCGCCCATTGGGGTGAGGAGCTGCGTGGTGAATCTGTACCAAAACAGC CTCTTTCCTCCTTGACTGAAAGACCCATTCCGTCTGTGCTTCTGCCCTGCAGGGCTGGCAGCAGCCCCTCCTGGGGGGC TCAGGAGCAGCCCCCTCTGCTGCTGCCTTCTCATGCTCAGCCCTGGGCTTCCAGCCCTGCTGCCTCATCCCACTCTACC GCGTGCCTCCACTGCCCCAAAGTGATGGAGAAGGGGAACCCTGCTGTTGGTATAATCTGCCTTTACTATTTATGAGTGT AAAAAAAATACTATAATTAATAAATTGGTCTATGTCTTTGAAAAAAAAANAAAAAAAAA
Citation	Ferrer-Vaquer A, Maurey P, Werzowa J, Firnberg N, Leibbrandt A, Neubüser A. Expression and regulation of HTRA1 during chick and early mouse development. Dev Dyn. 2008 Jul;237(7):1893-900.
Copyright	© 2008 Wiley-Liss, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # AF075708.1).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-11

stage 11

Forebrain
Head Mesenchyme
Heart
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Paraxial Mesoderm

Entry 9

GEISHA Id	PEA3.Betancur.2011	Data Source	Publication
Complete cDNA Template Probe	show CCGAGCTCGTGAAGGCGGCGATGCGCCAATGGGAGGCCGCCCCCGGGCGCTCAACGGCCTGAACGGCCGCGCGGGCGGG GCTGCGTGGGGCTCCGCATGGGCCGGGAGTCGCCACCGGGTGCGCTCCGAGAGCCGGGAGCTCCGCGGCCGCGGAGGTA GCGCCCGGGCGGCAGGATGAAGGGGTACGTGGACCAGCAGGTGCCGTTCACTTTCCCCCAGCCGCCGCCGGGCCATGCG GGCTCCGGGTGCCGGACTCCGACGGGCGCTGCGAAGAGCCCCATGGAGCCGGGCTTGCTGCCGGCGCAGGATTCGGAAG ACCTCTTCCAGGACTTGAGCCAGTTCCAGGAGACTTGGCTGACAGAAGCTCAGGTTCCAGACAGCGATGAGCAATTTGT GCCTGACTTCCATTCAGAAAACCCTTTTCATAGTCCTCCTGCAAAGATTAAAAAGGAACCACAGAGTCCCTCCTCGGAC CCCACGCTGTCCTGCAACCACAAGCAGCCATTCCAGTACCGCAATGGAGAGCAGTGCCTTTATGCCAGTGCCTATGATC AACCCAGACCGGTTGGGATCAAATCCCCTGACCCAGGAACCCCAATCCAGTCACCGCTCCAGCAGTTCCCCAGACAGGA CAGGAACTTCCTGACCCCTTCAGGGCCACCCCACCCCACATCCAGCTGTGGATACCTCATTGAAAACAGCTCTGCCTAC CAGCCACCTGTGGAGATGTGCCACTCCTTCCCCTCCTCCCAGGGCATGGCCCAGGATGCTCCCATCGCCTACCAGCGCC CCATGTCTGAGCAATGCCTTCAGTTCCCCCCGCAGGGCTTCAAGCAGGAGTTCCATGACCCACAGTATGAGCAGGCGGG CAGCAGCTGCCAGTACCCAGCAGCCGTGGTCATCAAGCAGGAGCAGGTGGACTACATGTATGACTCAGGCTGCAGCTAT GACAAGCAGATGAGGCCCTTTGCTGACGATGTCTGCGTTGTTCCAGAAAAATTTGAAGCAGGTGACATCAAGCAGGAGG TCGGAGGGTACCGGGAGGGCCCTCCCTATCAGCGGAGGGGATCTCTCCAGCTCTGGCAGTTCCTTGTGGCTCTATTGGA TGATCCCACCAACTCCCACTTCATTGCCTGGACTGGAAGAGGGATGGAGTTCAAGCTGATTGAGCCAGAAGAGGTAGCC AGGCTGTGGGGCATCCAGAAGAACCGGCCAGCCATGAACTACGACAAGCTGAGCCGCTCTCTTCGCTACTATTATGAGA AAGGCATCATGCAGAAGGTGGCGGGGGAACGCTACGTCTACAAGTTTGTGTGTGAGCCCGAGGCTCTGTTCTCTCTGGC CTTCCCTGACAACCAGCGGCCGGCCCTGAAGGCAGAGCTGGAGAGGCAGATCAGCGAGGAGGACACGGTGCCTCTGTCC CACCTGGATGAGAGCACTGCTTACCTGCCTGACCTTGGGAGCCTCCCCCCGCAGCTCTATGGCAAAGGTTACACCTACT AGTGCTGCTGGAGCTGTGTGCCACCCTGATCGTGTATATAAGGAGATGTCTGGTTAGTAACCAAGCTGTATAGGTGTTT TCCCAGGCCAGCCTGGGGCTGCACAGAGCTATGATACCTGCTGAGGGCAGGAGAAGGGTTCAGGTCAATGTGTGGCTGG ATAACCAGCAGGGGGTCAATGGGGCTGCTGGGGGCTGGTGGTGCCAACCCCATATCTGGCAGGATGGGACCACTCCTCA GTGTGAAGTCATCACCTGAGCAGGGCAGCTGTGGCTTCCCAGCATCACAGGTGGTCGCTGCCTCCAGCAGGAGCCCACC TACAGCATTCCTCCCCCCTTGGCAGATGTGATGCCATCCTGCTTGGCTTCTTCTCACAGCTGGGGATGCTACAGCTGCT GCTGGCTGCCTTCCTCCAGTGCTGACCCCCTGGGTATATTGCCCTCAGCCAGGGCAGCCCAGACCTGTGCAGATTCACC TCCTCAGGGCCAACCTTCTCTTCTGCCCAGGAGAGCTGTGCCATGTGGCTGCAAACCAAATGCCTTCCCCTGAATTGCT CTGTTGGCACTGAGAAGTGCCTGTCCCGTATGTGCATGCTCCTGCATTGCCACCTCCTTGCCTGCAGCACCTCATGCCA GGGCTGCCACATGTTCTTGAGCTGGGCAGCTGAAGGTGTGGGCCAGGGTGAGAGCACTCCCACTGTGCATGGCCCTAAA ACCAGCACAGGGCAAGCACAGAGCTTCCTGATGTGCTGTGCTGGGTATGAGGGGAGTCAAATCAATGTCATAGCCTCTA CCACCAGGCCATATGTGTGGCATGGCTGTTCCAGTCTAGACAAGGGCTAGAACCGTCTCTAGGATCTTTGGAGGCTCAG GGACTTGGCTAGAAAATCACCTGAGGTGTGAAAAGAACCTGGGGGGGGGGGAGGCATTATGAATACACTCTACAAAGTA ACTTAAATCAGAGCTCTTAACATCTGAATTCAGACCCAACCTCTGCATGCGTTTACCTCTTTGAAGGAAAGTCTGAAGT GTTGGAAAGGCAGATATCTCTGCAGCCCGAAGCAGCACTTTAACTGTTTTTCCCCAGTAGTGAACACTTACAGTGGGCA CCACATCCCCGGGGAGAGGTGCTGTGCTTCTTAATTAGCTGCTCCAGCCCAGCGCCCATTGGGGTGAGGAGCTGCGTGG TGAATCTGTACCAAAACAGCCTCTTTCCTCCTTGACTGAAAGACCCATTCCGTCTGTGCTTCTGCCCTGCAGGGCTGGC AGCAGCCCCTCCTGGGGGGCTCAGGAGCAGCCCCTTCTGCTGCTGCCTTCTCATGCTCAGCCCTGGGCTTCCAGCCCTG CTGCCTCATCCCACTCTACCGCGTGCCTCCACTGCCCCAAAGTGATGGAGAAGGGGAACCCTGCTGTTGGTATAATCTG CCTTTACTATTTATGAGTGTAAAAAAAATACTATAATTAATAAATTGGTCTATGTCTTTG
Citation	Betancur P, Sauka-Spengler T, Bronner M. A Sox10 enhancer element common to the otic placode and neural crest is activated by tissue-specific paralogs. Development. 2011 Sep;138(17):3689-98.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # AF075708).

no images

Entry 10

GEISHA Id	PEA3.Aragon.2009	Data Source	Publication
Complete cDNA Template Probe	show GTGCATAATAACCATAGGATTGTAACGCTCCAATATCTGTTTGACTCCCCCAGTGCCTATGATCAACCCAGACCGGTTG GGATCAAATCCCCTGACCCAGGAACCCCAATCCAGTCACCGTTCCAGCAGTTCCCCAGACAGGACAGGAACTTCCTGAC CCCTTCAGGGCCACCCCACCCCACATCCAGCTGGGGATACCTCATTGAAAACAGCTCTGCCTACCAGGCACCTGTGGAG ATGTGCCACTCCTTCCACTCCTCCCAGGGCATGGCCCAGGATGCTCCCATCGTCTACCAGCGCCCCATGTCTGAGCAAT GCCTTCAGTGCCCCCCGCAGGGCTTCAAGCAGGAGTTTCATGACCCACAGTATGAGCAGGCGGGCAGGAGCTGCCAGTA CCCAGCAGCCGTGGTCATCAAGCAGGAGCAGGTGGACTACATGTATGACTCAGGCTGCAGCTATGACAAGCAGATGAGG CCCTTTGCTGACGATGTCTGCGTTGTTCCAGAAAAATTTGAAGGTGACATCAAGCAGGAGGTCGGAGGGTACCGGGAGG GCCCTCCCTATCAGCGGAGGGGATCTCTCCAGCTCTGGCAGTTCCTTGTGGCTCTATTGGATGATCCCACCAACTCCCA CTTCATTGCCTGGACTGGAAGAGGGATGGAGTTCAAGCTGATTGAGCCAGAAGAGGTAGCCAGGCTGTGGGGCATCCAG AAGAACCGGCCAGCCATGAACTACGACAAGCTGAGCCGCTCTCTTCGCTACTATTATGAGAAAGGCATCATGCAGAAGG TGGCAGGGGAACGCTACGTCTACAAGTTTGTGTGTGAGCCCGAGGCTCTGTTCTCTCTGGCCTTCCCTGACAACCAGCG GCCGGCCCTGAAGGCAGAGCTGGAGAGGCAGATCAGCGAGGAGGACACGGTGCCTCTGTCCCACCTGGATGAGAGCACT GCTTACCTGCCTGACCTTGGGAGCCTCCCCCCGCAGCTCTATGGCAAAGGCTACACCTACTAGAGCTGCTGGAGCCGTG TGCCACCTGATCGTGTATATAAGGAGATGTCTGGTTAGTAACCAAGCTGTATAGGTGTTTTCCCAGGCCAGCCTGGGGC TGCACAGAGCTATGATACCTGCTGTGGGCAGGAGAAGGGTTCAGGTCAATGTGTGGTTGGATAACCAGCAGGGGGTCAA TGGGGCTGCTGGGTGCTGGTGGTGCCAACCCCATATCTGGCAGGATGGGACCACTCCTCAGTGTGAAGTCATCACCTGA GCAGGGCAGCTGTGGCTTCCCAGCATCACAGGTGGTCGCTGCCTCCAGCAGGAGCCCACCTACAGCATTCCTCCCCCCT TGGCAGATGTGATGCCATCCTGCTTGGCTTCTTCTCACAGCTGGGGATGCTACAGCTGCTGCTGGCTGCCTTCCTCCAG TGCTGACCCCCTGGGTATATTGCCCTCAGCCGGGGCAGCCCAGACCTGTGCAGATTCACCTCCTCAGGGCCAACCTTCT CTTCTGCCCAGGAGAGCTGTGCCATGTGGCTGCAAACCAAATGCCTTCCCCTGAATTGCTCTGTTGGCACTGAGAAGTG CCTGTCCCGTACGTGCATGCTCCTGCATTGCCACCTCCTTGCCTGCAGCACCTCATGCCAGGGCTGCCACATGTTCTTG AGCTGGGCAGCTGAAGGTGTGGGCCAGGGTGAGAGCACTCCCACTGTGCATGGCCCTAAAACCAGCACAGGGCAAGCAC AGAGCTTCCAGATGTGCTGTGCTGGGTATGAGGGGAGTCAAATCAATGTCATAGCCTCTACCACCAGGCCATATGTGTG GCATGGCTGTTCCAGCCTAGACAAGGGCTAGAACCATCTCTAGGATCTTTGGAGGCTCAGGGACTTGGCTAGAAAATCA CCTGAGGTGTGAAAAGAACCTGGGGGGGGGGAGGCATTATGAATACACTCTAAAAAGTAACTTAAATCGGAGCTCTTAA CATCTGAATTCAGACCCAACCTCTGCATGCGTTTACCTCTTTGAAGGAAAGTCTGAAGTGTTGGAAAGGCAGATATCTC TGCAGCCTGAAGCAGCACTTTAACTGTTTTTCCCCAGTAGTGAACATTTACAGTGGGCACCACATCCCCGGGGAGAGGT GCTGTGCTTCTTAATTAGCTGCTCCAGCCCAGCGCCCATTGGGGTGAGGAGCTGCGTGGTGAATCTGTACCAAAACAGC CTCTTTCCTCCTTGACTGAAAGACCCATTCCGTCTGTGCTTCTGCCCTGCAGGGCTGGCAGCAGCCCCTCCTGGGGGGC TCAGGAGCAGCCCCCTCTGCTGCTGCCTTCTCATGCTCAGCCCTGGGCTTCCAGCCCTGCTGCCTCATCCCACTCTACC GCGTGCCTCCACTGCCCCAAAGTGATGGAGAAGGGGAACCCTGCTGTTGGTATAATCTGCCTTTACTATTTATGAGTGT AAAAAAAATACTATAATTAATAAATTGGTCTATGTCTTTGAAAAAAAAANAAAAAAAAA
Citation	Ferran Aragon, Cristina Pujades. FGF signaling controls caudal hindbrain specification through Ras-ERK1/2 pathway. BMC Dev Biol. 2009; 9: 61.
Copyright	Copyright ©2009 Aragon and Pujades; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #AF075708.1 ).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-10

stage 7

stage 8

stage 10

Anterior Intestinal Portal
Endoderm
Head Mesenchyme
Hindbrain
Isthmus/MHB
Midbrain
Notochord
Paraxial Mesoderm
Primitive Streak
Somites

HH stage 7+
HH stage 8+

Entry 11

GEISHA Id	Pea3.Betancur.2011	Data Source	Publication
Complete cDNA Template Probe	show TACAAAACCTGAGCTCTTCACCCAGCTGTTTATTTTTATAAAACTGCAGGTCTGCTTATGCTCTATTCTAAATGTGTCT CTGCACCTCTGCACTTCAGTCAAGAAAAGAGTCAAGAAAGCTGGGAAGGTTATTTTTGTGTTACAGAGATGGGGAAGTG AGAAGACAACCATGCAGAGACATAAGGCCTCTGTCAGTTCTGTCATTGCCCACTGGATGGGAAATTAGAACATCATAAA GCAAACAAATATAACAGTGGAAAATCCCATCCGGTTCAGAGCGCAGCCATATGCTGAAATCAGATCTGAAATAACAAAG GTTCCATTATATCTTAACCAGGAAATGCAGCATTAATAACCAAGAGTTAAATGGCTATTTTGCAATGACCTGTATAGCA GAAAGTGCAAAGCAAAGCAGGGGTATCTGGTGTCTCATAGACTTTGCAGGACACTTAAAGTATGAATTGCTTAACAGCA ATCTAACTGGGGGACGTATTCTCTTGCAGCTTCCCAGTAGCATTCGATTGAAGTTAACTGCTTGAACAAATTGCTACAA AACAATATCTGTATATTCTGTATATCTGTATATAATATCCCCAGTAATATCTGGGGATGCGCTATAAGTTAGCATGTTC TTGTTTTGCCCCCATGAACAGATTAAAACTGCATTTGGGGCTGTTTTCCTGACAGAGTGGGTTCCTGGTAATGCTGGAG CTGCCTTTTTTTTCCAGCAGAAAGATTAAAATACCCTTAAACTGAATACTTTTCCATCATACACGTGTCATGCTGATTG CATTGGCTGCAGAGAAAACATGACAAAGATGCACAGTTTCTATATAGTATTAAGAGTAATTTGTGCTCATCCCTTCCTG TGCAGCAAGAGTAAAACTGGTTTTGGTTGCTTGGGCTTTAATTATTCTAACTCCAGGTGCATGAGTGAGATTTTTTTTC CAAATCTTGTTGGAACTTGAAGAACTTCCCGGGAACAGGGCTGAAAATAACCTTAAGACTCTTAGAAAATGACTGCAGT GTGGGTGAGAACTGGCAGGCCCCGTCGTGTGCCGCGCTGGGTAGGAGGCTGAAAGTGCAGGCTGAGCGTGCTCGCTCGG CGGCGGTTCGAGCTCCTTTGCAGCCTCTCATGAATGAACTTCCAGAGTTTTTTTATGAATGGGCGCTCCGTCCTTGAAT GAACACCAGTGCGCCGCGCTCTGATTGGCCTCGGCGGATAAAGCCACGCCCACTTTCCCCCCAGCGTGCTGCGATTGGT GGACGCGCCCCAGCCCAGGGCTTCATTCACGAAGTCAATGAAACAAAGGAGCGGGGAGCCGAGCTCGTGAAGGCGGCGA TGCGCCAATGGGAGGCCGCCCCCGGGCGCTCAACGGCCTGAACGGCCGCGCGGGCGGGGCTGCGTGGGGCTCCGCATGG GCCGGGAGTCGCCACCGGGTGCGCTCCGAGAGCCGGGAGCTCCGCGGCCGCGGAGGTAGCGCCCGGGCGGCAGGATGAA GGGGTACGTGGACCAGCAGGTGCCGTTCACTTTCCCTCAGCCGCCGCCGGGCCATGCGGGCTCCGGGTGCCGGACTCCG ACGGGCGCTGCGAAGAGCCCCATGGAGCCGGGCTTGCTGCCGGCGCAGGATTCGGAAGACCTCTTCCAGGACTTGAGCC AGTTCCAGGAGACTTGGCTGACAGAAGCTCAGGTTCCAGACAGCGATGAGCAATTTGTGCCTGACTTCCATTCAGAAAA CCTAGCTTTTCATAGTCCTCCTGCAAAGATTAAAAAGGAACCACAGAGTCCCTCCTCGGACCCCACGCTGTCCTGCAAC CACAAGCAGCCATTCCAGTACCGCAATGGAGAGCAGTGCCTTTATGCCAGTGCCTATGATCAACCCAGACCGGTTGGGA TCAAATCCCCTGACCCAGGAACCCCAATCCAGTCACCGCTCCAGCAGTTCCCCAGACAGGACAGGAACTTCCTGACCCC TTCAGGGCCACCCCACCCCACATCCAGCTGTGGATACCTCATTGAAAACAGCTCTGCCTACCAGCCACCTGTGGAGATG TGCCACTCCTTCCCCTCCTCCCAGGGCATGGCCCAGGATGCTCCCATCGCCTACCAGCGCCCCATGTCTGAGCAATGCC TTCAGTTCCCCCCGCAGGGCTTCAAGCAGGAGTTCCATGACCCACAGTATGAGCAGGCGGGCAGCAGCTGCCAGTACCC AGCAGCCGTGGTCATCAAGCAGGAGCAGGTGGACTACATGTATGACTCAGGCTGCAGCTATGACAAGCAGATGAGGCCC TTTGCTGACGATGTCTGCGTTGTTCCAGAAAAATTTGAAGCAGGTGACATCAAGCAGGAGGTCGGAGGGTACCGGGAGG GCCCTCCCTATCAGCGGAGGGGATCTCTCCAGCTCTGGCAGTTCCTTGTGGCTCTATTGGATGATCCCACCAACTCCCA CTTCATTGCCTGGACTGGAAGAGGGATGGAGTTCAAGCTGATTGAGCCAGAAGAGGTAGCCAGGCTGTGGGGCATCCAG AAGAACCGGCCAGCCATGAACTACGACAAGCTGAGCCGCTCTCTTCGCTACTATTATGAGAAAGGCATCATGCAGAAGG TGGCAGGGGAACGCTACGTCTACAAGTTTGTGTGTGAGCCCGAGGCTCTGTTCTCTCTGGCCTTCCCTGACAACCAGCG GCCGGCCCTGAAGGCAGAGCTGGAGAGGCAGATCAGCGAGGAGGACACGGTGCCTCTGTCCCACCTGGATGAGAGCACT GCTTACCTGCCTGACCTTGGGAGCCTCCCCCCGCAGCTCTATGGCAAAGGCTACACCTACTAGAGCTGCTGGAGCCGTG TGCCACCCTGATCGTGTATATAAGGAGATGTCTGGTTAGTAACCAAGCTGTATAGGTGTTTTCCCAGGCCAGCCTGGGG CTGCACAGAGCTATGATACCTGCTGTGGGCAGGAGAAGGGTTCAGGTCAATGTGTGGTTGGATAACCAGCAGGGGGTCA ATGGGGCTGCTGGGTGCTGGTGGTGCCAACCCCATATCTGGCAGGATGGGACCACTCCTCAGTGTGAAGTCATCACCTG AGCAGGGCAGCTGTGGCTTCCCAGCATCACAGGTGGTCGCTGCCTCCAGCAGGAGCCCACCTACAGCATTCCTCCCCCC TTGGCAGATGTGATGCCATCCTGCTTGGCTTCTTCTCACAGCTGGGGATGCTACAGCTGCTGCTGGCTGCCTTCCTCCA GTGCTGACCCCCTGGGTATATTGCCCTCAGCCGGGGCAGCCCAGACCTGTGCAGATTCACCTCCTCAGGGCCAACCTTC TCTTCTGCCCAGGAGAGCTGTGCCATGTGGCTGCAAACCAAATGCCTTCCCCTGAATTGCTCTGTTGGCACTGAGAAGT GCCTGTCCCGTACGTGCATGCTCCTGCATTGCCACCTCCTTGCCTGCAGCACCTCATGCCAGGGCTGCCACATGTTCTT GAGCTGGGCAGCTGAAGGTGTGGGCCAGGGTGAGAGCACTCCCACTGTGCATGGCCCTAAAACCAGCACAGGGCAAGCA CAGAGCTTCCAGATGTGCTGTGCTGGGTATGAGGGGAGTCAAATCAATGTCATAGCCTCTACCACCAGGCCATATGTGT GGCATGGCTGTTCCAGCCTAGACAAGGGCTAGAACCATCTCTAGGATCTTTGGAGGCTCAGGGACTTGGCTAGAAAATC ACCTGAGGTGTGAAAAGAACCTGGGGGGGGGGAGGCATTATGAATACACTCTAAAAAGTAACTTAAATCGGAGCTCTTA ACATCTGAATTCAGACCCAACCTCTGCATGCGTTTACCTCTTTGAAGGAAAGTCTGAAGTGTTGGAAAGGCAGATATCT CTGCAGCCTGAAGCAGCACTTTAACTGTTTTTCCCCAGTAGTGAACATTTACAGTGGGCACCACATCCCCGGGGAGAGG TGCTGTGCTTCTTAATTAGCTGCTCCAGCCCAGCGCCCATTGGGGTGAGGAGCTGCGTGGTGAATCTGTACCAAAACAG CCTCTTTCCTCCTTGACTGAAAGACCCATTCCGTCTGTGCTTCTGCCCTGCAGGGCTGGCAGCAGCCCCTCCTGGGGGG CTCAGGAGCAGCCCCCTCTGCTGCTGCCTTCTCATGCTCAGCCCTGGGCTTCCAGCCCTGCTGCCTCATCCCACTCTAC CGCGTGCCTCCACTGCCCCAAAGTGATGGAGAAGGGGAACCCTGCTGTTGGTATAATCTGCCTTTACTATTTATGAGTG TAAAAAAAATACTATAATTAATAAATTGGTCTATGTCTTTG
Citation	Betancur P, Sauka-Spengler T, Bronner M. A Sox10 enhancer element common to the otic placode and neural crest is activated by tissue-specific paralogs. Development. 2011 Sep;138(17):3689-98.
Copyright	© 2011. Published by The Company of Biologists Ltd
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (XM_015299450.2). Pea3 is also known as ETV4 in NCBI.

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 8

stage 9

stage 11

Central Nervous System
Ear/Otic Placode

31-44

stage 44

Entry 12

GEISHA Id	ETV4.Trevers.2023	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show GGGGAGCCGAGCTCGTGAAGGCGGCGATGCGCCAATGGGAGGCCGCCCCCGGGCGCTCAACGGCCTGAACGGCCGCGCG GGCGGGGCTGCGTGGGGCTCCGCATGGGCCGGGAGTCGCCACCGGGTGCGCTCCGAGAGCCGGGAGCTCCGCGGCCGCG GAGGTAGCGCCCGGGCGGCAGGATGAAGGGGTACGTGGACCAGCAGGTGCCGTTCACTTTCCCCCAGCCGCCGCCGGGC CATGCGGGCTCCGGGTGCCGGACTCCGACGGGCGCTGCGAAGAGCCCCATGGAGCCGGGCTTGCTGCCGGCGCAGGATT CGGAAGACCTCTTCCAGGACTTGAGCCAGTTCCAGGAGACTTGGCTGACAGAAGCTCAGGTTCCAGACAGCGATGAGCA ATTTGTGCCTGACTTCCATTCAGAAAACCTAGCTTTTCATAGTCCTCCTGCAAAGATTAAAAAGGAACCACAGAGTCCC TCCTCGGACCCCACGCTGTCCTGCAACCACAAGCAGCCATTCCAGTACCGCAATGGAGAGCAGTGCCTTTATGCCAGTG CCTATGATCAACCCAGACCGGTTGGGATCAAATCCCCTGACCCAGGAACCCCAATCCAGTCACCGCTCCAGCAGTTCCC CAGACAGGACAGGAACTTCCTGACCCCTTCAGGGCCACCCCACCCCACATCCAGCTGTGGATACCTCATTGAAAACAGC TCTGCCTACCAGCCACCTGTGGAGATGTGCCACTCCTTCCCCTCCTCCCAGGGCATGGCCCAGGATGCTCCCATCGCCT ACCAGCGCCCCATGTCTGAGCAATGCCTTCAGTTCCCCCCGCAGGGCTTCAAGCAGGAGTTCCATGACCCACAGTATGA GCAGGCGGGCAGCAGCTGCCAGTACCCAGCAGCCGTGGTCATCAAGCAGGAGCAGGTGGACTACATGTATGACTCAGGC TGCAGCTATGACAAGCAGATGAGGCCCTTTGCTGACGATGTCTGCGTTGTTCCAGAAAAATTTGAAGCAGGTGACATCA AGCAGGAGGTCGGAGGGTACCGGGAGGGCCCTCCCTATCAGCGGAGGGGATCTCTCCAGCTCTGGCAGTTCCTTGTGGC TCTATTGGATGATCCCACCAACTCCCACTTCATTGCCTGGACTGGAAGAGGGATGGAGTTCAAGCTGATTGAGCCAGAA GAGGTAGCCAGGCTGTGGGGCATCCAGAAGAACCGGCCAGCCATGAACTACGACAAGCTGAGCCGCTCTCTTCGCTACT ATTATGAGAAAGGCATCATGCAGAAGGTGGCAGGGGAACGCTACGTCTACAAGTTTGTGTGTGAGCCCGAGGCTCTGTT CTCTCTGGCCTTCCCTGACAACCAGCGGCCGGCCCTGAAGGCAGAGCTGGAGAGGCAGATCAGCGAGGAGGACACGGTG CCTCTGTCCCACCTGGATGAGAGCACTGCTTACCTGCCTGACCTTGGGAGCCTCCCCCCGCAGCTCTATGGCAAAGGCT ACACCTACTAGAGCTGCTGGAGCCGTGTGCCACCCTGATCGTGTATATAAGGAGATGTCTGGTTAGTAACCAAGCTGTA TAGGTGTTTTCCCAGGCCAGCCTGGGGCTGCACAGAGCTATGATACCTGCTGTGGGCAGGAGAAGGGTTCAGGTCAATG TGTGGTTGGATAACCAGCAGGGGGTCAATGGGGCTGCTGGGTGCTGGTGGTGCCAACCCCATATCTGGCAGGATGGGAC CACTCCTCAGTGTGAAGTCATCACCTGAGCAGGGCAGCTGTGGCTTCCCAGCATCACAGGTGGTCGCTGCCTCCAGCAG GAGCCCACCTACAGCATTCCTCCCCCCTTGGCAGATGTGATGCCATCCTGCTTGGCTTCTTCTCACAGCTGGGGATGCT ACAGCTGCTGCTGGCTGCCTTCCTCCAGTGCTGACCCCCTGGGTATATTGCCCTCAGCCGGGGCAGCCCAGACCTGTGC AGATTCACCTCCTCAGGGCCAACCTTCTCTTCTGCCCAGGAGAGCTGTGCCATGTGGCTGCAAACCAAATGCCTTCCCC TGAATTGCTCTGTTGGCACTGAGAAGTGCCTGTCCCGTACGTGCATGCTCCTGCATTGCCACCTCCTTGCCTGCAGCAC CTCATGCCAGGGCTGCCACATGTTCTTGAGCTGGGCAGCTGAAGGTGTGGGCCAGGGTGAGAGCACTCCCACTGTGCAT GGCCCTAAAACCAGCACAGGGCAAGCACAGAGCTTCCAGATGTGCTGTGCTGGGTATGAGGGGAGTCAAATCAATGTCA TAGCCTCTACCACCAGGCCATATGTGTGGCATGGCTGTTCCAGCCTAGACAAGGGCTAGAACCATCTCTAGGATCTTTG GAGGCTCAGGGACTTGGCTAGAAAATCACCTGAGGTGTGAAAAGAACCTGGGGGGGGGGAGGCATTATGAATACACTCT AAAAAGTAACTTAAATCGGAGCTCTTAACATCTGAATTCAGACCCAACCTCTGCATGCGTTTACCTCTTTGAAGGAAAG TCTGAAGTGTTGGAAAGGCAGATATCTCTGCAGCCTGAAGCAGCACTTTAACTGTTTTTCCCCAGTAGTGAACATTTAC AGTGGGCACCACATCCCCGGGGAGAGGTGCTGTGCTTCTTAATTAGCTGCTCCAGCCCAGCGCCCATTGGGGTGAGGAG CTGCGTGGTGAATCTGTACCAAAACAGCCTCTTTCCTCCTTGACTGAAAGACCCATTCCGTCTGTGCTTCTGCCCTGCA GGGCTGGCAGCAGCCCCTCCTGGGGGGCTCAGGAGCAGCCCCCTCTGCTGCTGCCTTCTCATGCTCAGCCCTGGGCTTC CAGCCCTGCTGCCTCATCCCACTCTACCGCGTGCCTCCACTGCCCCAAAGTGATGGAGAAGGGGAACCCTGCTGTTGGT ATAATCTGCCTTTACTATTTATGAGTGTAAAAAAAATACTATAATTAATAAATTGGTCTATGTCTTTG
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_015299450).