GEISHA - A Chicken Embryo Gene Expression Database
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PIWIL1
piwi like RNA-mediated gene silencing 1

Gene
Official SymbolPIWIL1
Official Full Namepiwi like RNA-mediated gene silencing 1
CGNC ID50348
also known asCIWI, PIWI, piwi-like protein 1|piwi-like 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001098852
PolypeptideNP_001092322
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.16962
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly3355150FBgn0250816
Human9271ENSG00000125207MIM:605571
Mouse57749ENSMUSG00000029423All phenotypic alleles (2):Targeted, other(2) MGI:1928897
Xenopus100488735963232
Zebrafish100331962, 368200ENSDARG00000041699ZDB-GENE-030813-2ZFIN:ZDB-GENE-030813-2
Gene Ontology
Molecular FunctionDNA binding, mRNA binding, piRNA binding, single-stranded RNA binding
Biological Processgene silencing by RNA, meiosis, multicellular organismal development, piRNA metabolic process, more...regulation of translation, spermatid development
Cellular Componentchromatoid body, cytoplasm, mRNA cap binding complex, P granule, polysome
Links to other databases
Entrez Gene416804
Ensembl GeneENSGALG00000002645
KEGGgga:416804

Entry 1

GEISHA IdPIWIL1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerACTGTCTTTAGCAGATAGGGGCG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGCACATTTCCTCTCTTCCTCCGATACcDNA Template Length901
Forward cDNA Template Probeshow
GACGGATCAGACAGGCTGGTTCAAGTCACTGATATCTTGGTTATATTGCCTTTTGTAGTAGTCTATATAGCTGATTTCA
GAGCCATCTGCTCGTCTAAAAGTACACTGTGGATTGGCATCCCAGTCGATGTCATCAACTCTGTATGTTCTGTTATTGT
ACTTCGTAAGAACAATTACACCTATCAGCTCCTTTGCACAGGCATCTCTAAATCTTCTCTCTTCAACCTGTTCATAGAG
ACTGTACATAAAATCCAAAACTGTTTCACTACGAAGAATCTTATGGCTCACATCTGCACATAACATAATGCTCTCCTCA
TACTGGAGAATAGAACTTGTGAAGCCTGGCCAAACCATCAACCTGTGATTAGGGATGCTGACTGGGTCCTTAGGGTTGT
AATAGTTACGTCCAATTTGCTGAAAATTCATCATCTTCAGAAGCCTTCTAAAAATGATGTTGTAAAACTGCAGACATGT
AGGTGAAGTAGGTGGTAATTCATTAGTCAATGTGATCGTGATCCTCACATCTTCTCCATTTCGGGTCTTAGAATATACT
TCAGTAACCTTATTTGGCAGTCTTTTTGGCAAGAATAATATTGATCCATCAAATGCATGCGTTTTTCCAATTAGGTCTT
CATGCTGAAAGAGCAAACCTGATCGAAGGCGGCGTGCTTCCATCTCAGGATTATAGTCTACATGGTATTGATATAAAGC
CCATTGGGGTCGAGATGTGAGACGAAAAAAATTTGCAATTAATTTTATCATAGCACCTGAAGAGCCAGTTTTTGATTCT
CTAACGTGTTCTATGGCTTGTCGAGTATTTACCCCGAGGTCATGGAAATCCCGACGACGTCCGCCCCTATCTGCAAAAN
NACAGT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
Unlabeled
 
7-12
stage 7
stage 7
stage 7
stage 8
stage 10
stage 12
Ectoderm
Endoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Paraxial Mesoderm
 
19-24
stage 19
stage 19
stage 23
stage 23
stage 23
stage 24
stage 24
Amnion
Ectoderm
Eye
Foregut
Head Mesenchyme
Intermediate Mesoderm
Liver
Lung
Mesonephros
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Ganglia and Nerves
Tail
Dorsal Mesentery
dorsal mesentery
25
stage 25
stage 25
Allantois
Foregut
Liver
Lung
Mesonephros
Pharyngeal Arches and Clefts
Spinal Cord
Tail
 

Entry 2

GEISHA IdCIWI.Kim.2012Data SourcePublication
Complete cDNA Template Probeshow
CGTGATGGTGTAGGAGATGGACAGCTCAATACTTTAGTGAACTATGAAGTGCCTCAGTTTCTGGATTGCTTGAAGACTG
TTGGTAAAGACTACAATCCAAGACTGACTGTGATCGTTGTGAAGAAACGAGTGAGTACCAGATTCTTTGCGCAGGCTGG
TGGAGGACTTAAAAACCCACCCCCTGGTACTGTCGTTGATATAGAGGTGACCAGACCAGAATGGTATGATTTCTTTATT
GTGAGTCAGGCAGTGAGAAATGGTTGTGTCGCACCCACTCATTATAACGTAGTGTATGACACTAGCAAACTGAAACCAG
ATCATGTACAACGTTTAACCTACAAACTTTGCCACATGTACTATAACTGGTCGGGTGTTATCAGAGTACCTGCTCCTTG
CCAGTATGCCCATAAACTGGCTTTCCTTG
CitationKim TH, Yun TW, Rengaraj D, Lee SI, Lim SM, Seo HW, Park TS, Han JY. Conserved functional characteristics of the PIWI family members in chicken germ cell lineage. Theriogenology. 2012 Dec;78(9):1948-59. doi: 10.1016/j.theriogenology.2012.07.019
CopyrightCopyright © 2012 Elsevier Inc. All rights reserved.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-44
stage 44
stage 44
stage 44
Ovary
Testis
adult chicken
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.16962

Mouse

EmageMGI:1928897
EurexpressMGI:1928897
MGI GXDMGI:1928897

Frog

Xenbase963232

Fruit Fly

BDGPFBgn0250816

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030813-2
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