GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

PRICKLE1
prickle planar cell polarity protein 1

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolPRICKLE1
Official Full Nameprickle planar cell polarity protein 1
CGNC ID7274
also known asprickle-like protein 1|prickle homolog 1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_416036
PolypeptideXP_416036
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human144165ENSG00000139174MIM:612437MIM:608500
Mouse106042ENSMUSG00000036158All phenotypic alleles (6):Chemically induced(2) Targeted, other(4) MGI:1916034
Xenopus549693, 398256, 398264486940
Zebrafish556148, 368249ENSDARG00000045694, ENSDARG00000040649ZDB-GENE-030131-2152, ZDB-GENE-030724-5ZFIN:ZDB-GENE-030131-2152, ZFIN:ZDB-GENE-030724-5
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene417793
Ensembl Gene
KEGGgga:417793
GEISHA IdPK1.Cooper.2008Data SourcePublication
Complete cDNA Template Probeshow
ATGGAGCCCAAAGCTAACAATCTTGTCTTCGCGTGTCAGCGAAGCTCAACATCAGATGACGACTCTGGCTGTGCCCTGG
AAGAATATGCCTGGGTCCCACCAGGCCTCAGACCAGAGCAGGTACAGCTGTATTTTGCCTGCCTGCCAGAGGAGAAGGT
CCCTTATGTTAACAGCCCGGGAGAGAAGCACAGGATTAAACAACTTCTCTATCAGCTGCCGCCCCATGATAATGAGGTG
AGATACTGCCAGTCTTTAAGCGAAGAAGAGAAGAAAGAACTGCAGATGTTTAGTTCTCAGCGCAAAAAGGAGGCACTCG
GACGAGGCACTATTAAGCTTCTCTCGAGAGCAGTGATGCACGCAGTCTGTGAACAGTGTGGTACAAAAATAAACGGCGG
TGAAGTTGCAGTTTTTGCCTCGAGAGCTGGCCCTGGTGTATGCTGGCACCCATCATGCTTTGTATGCTTCACGTGTAAT
GAGCTCCTCGTTGACCTCATCTACTTCTACCAAGATGGAAAAATTCACTGCGGCAGACACCATGCTGAGCTACTTAAAC
CTCGATGTTCAGCCTGTGATGAGATAATTTTTGCTGATGAGTGTACGGAAGCTGAAGGTCGCCACTGGCACATGAAGCA
CTTCTGTTGCCTTGAGTGTGAAACAGTCCTGGGTGGGCAGAGATACATCATGAAGGATGGGCGTCCATTCTGCTGTAGC
TGTTTTGAATCCCTTTATGCAGAATACTGTGAGACCTGTGGGGAGCACATTGGTGTTGACCATGCCCAGATGACCTATG
ATGGACAGCACTGGCACGCTACAGAGACTTGCTTTTCTTGTGCTCAGTGCAAGACCTCTTTGCTTGGCTGCCCTTTCCT
TCCAAAGCAAGGGCAGATCTACTGTTCAAAAACCTGCAGCTTGGGTGAGGATGTTCATGCCTCCGATTCTTCTGATTCA
GCATTTCAGTCTGCTCGATCGAGAGATTCCAGGAGGAGCATTCGCATGGGAAAAAGCAGCCGCTCAGCTGATCAGTGCC
GCCAGTCTCTCCTCCTATCACCAGCCCTCAATTATAAATTTCCCGGTCTTTCAGGCAGTGCGGATGATACGCTTTCTCG
TAAGCTGGATGACTTAAGCCTTTCAAGGCAAGAGGCAAGCTTTGTTAACGAAGACTTCTGGAAAGGAAGAGTAGAGCAA
GAAATGCCCGAAGACCCTGAAGAATGGGCTGAACATGAAGACTACATGACTCAACTTCTTCTGAAGTTTGGTGATAAAA
GCCTCTTCCAGCAACCTGCTGAAGTAGAGATTAGATCAAGTGAACACTGGATTTCTGATAGCATGGTCAAGAGCAAGTT
GGACTTGAAAAAAAATAACCCAAGCCTAGCAAGTAAGAAATATCAATCAGACATGTACTGGGCCCAATCCCAAGATGGT
TTGGGTGACTCTGCATATGGCAGCCATCCAGGCCCTGCCAGCAGCAGAAAGATCCAAGAGCTGGACATGGAACACGGGG
CATCAGGATACAAACATGACCAGACACCGTGGTACGGAGGTTCACTTGAATGTTTGTCTGATCTGAAGCAGCAAGAACA
AAGCGTTCGGGACTCAATGGATTCTTTGGCTTTGTCTAACATAACAGGGGCTTCAATGGATGGAGAAGGAAAGCCACGG
CAATCTCTCTATTCTTTACAAACTTTCCAAGAATTGGAGGTAGAGGACTGTGAGAAGATGAGCAACATGGGAACTCTGA
ATTCTTCAATGCTCCATCGGAGCACAGAGTCCTTGAAGAGTCTGAGCTCAGAGCTGTGCCAGGAAAAAGCATTACCAGA
GGAAAAGCCAGCGCATATGCCTGTACTGAGAAGATCTAAATCCCAGTCTAGACCGCAGCAAGTCAAGTTTTCAGATGAT
GTTATTGATAATGGAAGTTACGAGAATGTTGAAATTCGACAACCTCCGATGAGTGAAAGGACTCGTAGGCGCGTTTATC
ATTTCGAAGAACGTGGAAATCGGCCTTCTCATCATCGCAGAAGAAGTAGGAAATCTCGTTCAGATAATGCACTTAATTT
GGTCACAGAAAGAAGATACTCTCCAAAAGAAAGGTTTCGTTATTACTCACCTCAGGATCACGAAAAATTTATTCAAAAC
AAAAGCTCACGTGAGTTTCGGGCCTATATTCAAAATGCGGAACTGTATGGCCAGTATGCCCATACTAGTTCTGATTATG
CACTGAGGAATCAGGCCGTTGATAAATTCTTTGGATTATATGGTGAGGAAGATGACTCCTGGTGCTCAACTTCATCCTC
ATCGTCAGATTCTGAAGAGGAAGGGTATTTCCTAGGACAGCCAATTCCGCAGCCGCGGTCACTGAGATATCCGTACTAC
ACAGATGACCTTTCTGGTCCAACTACTGCGTTATCGAGTTCTCAGTTTGGACAAAGGACAACCAAATCAAAGAAGAAGA
AGAGGGGGCACAAAGGGAAAAATTGCATAATTTCTTA
CitationCooper O, Sweetman D, Wagstaff L, Münsterberg A. Expression of avian prickle genes during early development and organogenesis. Dev Dyn. 2008 May;237(5):1442-8.
Copyright© 2008 Wiley-Liss, Inc.
CommentsThe cDNA template used to generate the probe was obtained by PCR as described in Cooper et al.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XII
stage XII
Area Opaca
STAGE XII
1-3
stage 3
Primitive Streak
 
4-6
stage 4
stage 5
Ectoderm
Hensen's Node
Notochord
Primitive Streak
 
7-12
stage 8
stage 10
stage 10
stage 10
stage 10
stage 10
Foregut
Hensen's Node
Lateral Plate Mesoderm
Leg
Neural Plate/Tube
Notochord
Primitive Streak
Somites
floor plate (fp)
13-18
stage 17
stage 17
stage 17
Dermomyotome
Leg
Limb Buds
Sclerotome
Somites
 
19-20
stage 20
Aorta
Mesencephalon
Myotome
Wing
 

Mouse

EmageMGI:1916034
EurexpressMGI:1916034
MGI GXDMGI:1916034

Frog

Xenbase486940

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-2152, ZDB-GENE-030724-5
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona