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Gene Family QuickSearch
Human Disease Gene Search
PAX3 The human orthologue of this gene is associated
Gene Summary Expression Transcript Levels Other Species Expression JBrowse Gene Official Symbol PAX3 Official Full Name paired box 3 CGNC ID 3903 also known as paired box protein Pax-3|Paired-box transcription factor protein PAX3|paired box gene 3 gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Molecular Function Biological Process Cellular Component
Links to other databases
Entry 1 GEISHA Id Pax3.Jensen.2005 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Jensen A. Potential Roles for BMP and Pax Genes in the Development of Iris Smooth Muscle. Dev Dyn. 2005 Feb;232(2):385-92. Copyright Copyright © 2005 Wiley-Liss, Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc #NM_204269 )
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 31-39
stage 31
stage 36
stage 39
Eye
Entry 2 GEISHA Id Pax3.Amthor.2006 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Amthor H, Otto A, Macharia R, McKinnell I, Patel K. Myostatin imposes reversible quiescence on embryonic muscle precursors. Dev Dyn. 2006 Mar;235(3):672-80. Copyright Copyright © 2006 Wiley-Liss, Inc.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24 stage 22
Wing 25-26 stage 26
Wing
Entry 3 GEISHA Id Pax3.Bothe.2006 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Bothe I, Dietrich S. The molecular setup of the avian head mesoderm and its implication for craniofacial myogenesis. Dev Dyn. 2006 Oct;235(10):2845-60. Copyright Copyright © 2006 Wiley-Liss, Inc. Comments Insufficient information provided to verify exact probe sequence. Sequence was obtained from NCBI (NM_204269).
Entry 4 GEISHA Id Pax3.Ahmed.2006 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Ahmed MU, Cheng L, Dietrich S. Establishment of the epaxial-hypaxial boundary in the avian myotome. Dev Dyn. 2006 Jul;235(7):1884-94. Copyright Copyright © 2006 Wiley-Liss, Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24 stage 22
stage 22
stage 24
Dermatome Myotome 25 stage 25
Dermatome Myotome
Entry 5 GEISHA Id PAX3.Bothe.2007 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Bothe I, Ahmed MU, Winterbottom FL, von Scheven G, Dietrich S. Extrinsic versus intrinsic cues in avian paraxial mesoderm patterning and differentiation. Dev Dyn. 2007 Sep;236(9):2397-409. Copyright Copyright © 2007 Wiley-Liss, Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
Entry 6 GEISHA Id PAX3.Lin.2007 Data Source Publication Complete cDNA Template Probe show GCATCCGGCCCTGTGTCATCTCCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTCTGCCGCTACCAGGA
Citation Lin J, Redies C, Luo J. Regionalized expression of ADAM13 during chicken embryonic development. Dev Dyn. 2007 Mar;236(3):862-70. Copyright Copyright © 2007 Wiley-Liss, Inc. Comments Sequence below was obtained from NCBI (NM_204269) using the primers given in the publication. The forward primer of Pax3 was 5'-GCATCCGGCCCTGTGTCATCTC-3', and the reverse primer was 5'-GCTCCTGCCTGCTTCCTCCATCT-3'.
Entry 7 GEISHA Id Pax3.Stricker.2006 Data Source Publication Complete cDNA Template Probe show AGATCGTGGAGATGGCGCACCACGGCATCCGGCCCTGTGTCATCTCCCGGCAGCTGCGCGTGTCCCACGGCTGCGTCTC
Citation Stricker S, Brieske N, Haupt J, Mundlos S. Comparative expression pattern of Odd-skipped related genes Osr1 and Osr2 in chick embryonic development. Gene Expr Patterns. 2006 Oct;6(8):826-34. Epub 2006 Mar 22. Copyright Reprinted with permission from Elsevier. Copyright © 2006 Elsevier B.V. All rights reserved. Comments As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204269.1) and was truncated based on this 5' primer CTTCTAGATIGTGGA(AG)ATGGC(ACGT)CA(CT)CA(CT)G.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24 stage 22
stage 24
Leg Leg Mesenchyme 25-28 stage 26
stage 28
Leg Mesenchyme
Entry 8 GEISHA Id Pax3.Cheng.2004 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Cheng L, Alvares LE, Ahmed MU, El-Hanfy AS, Dietrich S. The epaxial-hypaxial subdivision of the avian somite. Dev Biol. 2004 Oct 15;274(2):348-69. Copyright Reprinted from Developmental Biology, Volume 274, Issue 2, Louise Cheng, Lúcia E. Alvares, Mohi U. Ahmend, Amira S. El-Hanfy, and Susanne Dietrich, The epaxial-hypaxial subdivision of the avian somite, Pages 348-369, Copyright 2004, with permission from Elsevier.
Copyright © 2004 Elsevier B.V. All rights reserved. Comments Authors said probe came from (Goulding et al., 1994) who indicate "a 182 bp fragment encompassing the homeobox and
octapeptide sequences was used for Pax-3."As information provided is insufficient to verify exact sequence used to synthesize the probe, the sequence below was obtained from NCBI (Acc# NM_204269.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7 stage 7
Dermomyotome
Entry 9 GEISHA Id Pax3.Reijntjes.2007 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Reijntjes S, Stricker S, Mankoo BS. A comparative analysis of Meox1 and Meox2 in the developing somites and limbs of the chick embryo. Int J Dev Biol.(2007); 51(8:753-9. Copyright Reprinted from Int. J. Dev. Biol., 51, Reijntjes S, Stricker S, Mankoo BS, A
comparative analysis of Meox1 and Meox2 in the developing somites and limbs of
the chick embryo, 753-9, Copyright © 2007 UBC Press, with permission. All rights
reserved. Comments According to authors , "MyoD, Pax3 and Myf5 anti-sense probes were a kind gift of Philippa Francis-West.." As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204269).
Entry 10 GEISHA Id Pax3.Duprez.2002 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Duprez, D (2002). Signals regulating muscle formation in the limb during embryonic development. Int J Dev Biol. 2002;46(7):915-25. Copyright "Reprinted from Int. J. Dev. Biol., 46, Duprez, D, Signals regulating muscle formation in the limb during embryonic development, 915-25, Copyright (2002), with permission from Copyright © 2002 UBC Press". All rights reserved.
Entry 11 GEISHA Id Pax3.Christ.2002 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Christ B, Brand-Saberi B. Limb muscle development. Int J Dev Biol. 2002;46(7):905-14. Copyright "Reprinted from Int. J. Dev. Biol., 46, Christ B, Brand-Saberi B, Limb muscle development, 905-14, Copyright (2002), with permission from Copyright © 2002 UBC Press". All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc #NM_204269).
Entry 12 GEISHA Id Pax3.Firnberg.2002 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Firnberg N, Neubüser A (2005).FGF signaling regulates expression of Tbx2, Erm, Pea3, and Pax3 in the early nasal region. Dev Biol. 2002 Jul 15;247(2):237-50. Copyright "Reprinted from Developmental Biology, 247(2), Firnberg N, Neubüser A, FGF signaling regulates expression of Tbx2, Erm, Pea3, and Pax3 in the early nasal region, 237-50., Copyright (2002), with permission from Elsevier".
Copyright © (2002) Elsevier B.V. All rights reserved. Comments According to authors, "The plasmids used to prepare the antisense riboprobes employed in this study have previously been described: (Refs)." As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204269).
Entry 13 GEISHA Id PAX3.Gamer.2001 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Gamer LW, Cox KA, Small C, Rosen V (2001). Gdf11 is a negative regulator of chondrogenesis and myogenesis in the developing chick limb. Dev Biol. 2001 Jan 15;229(2):407-20. Copyright Copyright © 2000 Academic Press. All rights reserved.
Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-28 stage 26
stage 28
Somites Wing
Entry 14 GEISHA Id PAX3.Amthor.2002b Data Source Publication Complete cDNA Template Probe show AGTGAGCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGGAG
Citation Amthor H, Christ B, Rashid-Doubell F, Kemp CF, Lang E, Patel K (2002). Follistatin regulates bone morphogenetic protein-7 (BMP-7) activity to stimulate embryonic muscle growth. Dev Biol. 2002 Mar 1;243(1):115-27 Copyright "Reprinted from Developmental Biology, 243(1), Amthor H, Christ B, Rashid-Doubell F, Kemp CF, Lang E, Patel K, Follistatin regulates bone morphogenetic protein-7 (BMP-7) activity to stimulate embryonic muscle growth., Pages No., Copyright (2002), with permission from Elsevier".
Copyright © (2002) Elsevier B.V. All rights reserved.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-30 stage 28
stage 29
Somites Wing Muscles 31-44 stage 44
Entry 15 GEISHA Id PAX3.Huang.2003 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Huang R, Stolte D, Kurz H, Ehehalt F, Cann GM, Stockdale FE, Patel K, Christ B. Ventral axial organs regulate expression of myotomal Fgf-8 that influences rib development. Dev Biol. 2003 Mar 1;255(1):30-47. Copyright Copyright © 2003 Elsevier Science (USA) All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-20 stage 20
Somites
Entry 16 GEISHA Id PAX3.Taneyhill.2005 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Taneyhill LA, Bronner-Fraser M. Dynamic alterations in gene expression after Wnt-mediated induction of avian neural crest. Mol Biol Cell. 2005 Nov;16(11):5283-93. Epub 2005 Aug 31. Copyright Copyright 2004, MBC Online by The American Society for Cell Biology. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-16 stage 16
stage 16
stage 16
stage 16
Neural Crest Neural Plate/Tube
Entry 17 GEISHA Id PAX3.Basch.2006 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Basch ML, Bronner-Fraser M, García-Castro MI. Specification of the neural crest occurs during gastrulation and requires Pax7. Nature. 2006 May 11;441(7090):218-22. Copyright Copyright © 2006, Nature Publishing Group Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
Entry 18 GEISHA Id Pax3.McCabe.2008 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation McCabe KL, Bronner-Fraser M. Essential role for PDGF signaling in ophthalmic trigeminal placode induction. Development. 2008 May;135(10):1863-74. Epub 2008 Apr 16.
Copyright Published by The Company of Biologists 2007. This material is protected by a copyright retained by the authors. Permission granted by Dr. Bronner-Fraser.
Entry 19 GEISHA Id PAX3.Sanders.2002 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Sanders TA, Lumsden A, Ragsdale CW. Arcuate plan of chick midbrain development. J Neurosci. 2002 Dec 15;22(24):10742-50. Copyright Copyright © 2002-2011 by the Society for Neuroscience Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204269).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-26 stage 26
stage 26
Midbrain
Entry 20 GEISHA Id PAX3.Berthoud.2004 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Berthoud VM, Singh R, Minogue PJ, Ragsdale CW, Beyer EC. Highly restricted pattern of connexin36 expression in chick somite development. Anat Embryol (Berl). 2004 Nov;209(1):11-8. Copyright © Springer-Verlag 2004 Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204269).
Entry 21 GEISHA Id PAX3.Merchan.2011 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Merchán,P, Bardet, SM, Puelles, L, Ferran, JL, Comparison of Pretectal Genoarchitectonic Pattern between Quail and Chicken Embryos. Front Neuroanat. 2011; 5: 23. Prepublished online 2010 December 29. Published online 2011 April 5 Copyright Copyright © 2011 Merchán, Bardet, Puelles and Ferran. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204269.1 ).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-27 stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 27
stage 27
stage 27
Midbrain
Entry 22 GEISHA Id PAX3.Canning.2008 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Canning CA, Lee L, Luo SX, Graham A, Jones CM. Neural tube derived Wnt signals cooperate with FGF signaling in the formation and differentiation of the trigeminal placodes. Neural Dev. 2008 Dec 15;3:35. Copyright © 2008 Canning et al.; licensee BioMed Central Ltd.
This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0),
Entry 23 GEISHA Id PAX3.Moeller.2003 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Moeller C, Swindell EC, Kispert A, Eichele G
Carboxypeptidase Z (CPZ) modulates Wnt signaling and regulates the development of skeletal elements in the chicken. Development. 2003 Nov;130(21):5103-11. Epub 2003 Aug 27
Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204269.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-21 stage 21
stage 21
stage 21
Unlabeled
Entry 24 GEISHA Id PAX3.Bobak.2009 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Bobak N, Agoston Z, Schulte D. Evidence against involvement of Bmp receptor 1b signaling in fate specification of the chick mesencephalic alar plate at HH16. Neurosci Lett. 2009 Sep 25;461(3):223-8. Epub 2009 Jun 16 Copyright Reprinted with permission from Elsevier.
Copyright © 2009 Elsevier B.V. All rights reserved.
Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204269.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-16 stage 16
stage 16
Midbrain
Entry 25 GEISHA Id PAX3.Davey.2006 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Davey MG, Paton IR, Yin Y, Schmidt M, Bangs FK, Morrice DR, Smith TG, Buxton P, Stamataki D, Tanaka M, Münsterberg AE, Briscoe J, Tickle C, Burt DW. The chicken talpid3 gene encodesa novel protein essentialfor Hedgehog signaling. Genes Dev. 2006 May 15; 20(10): 13651377. Copyright Copyright © 2006, Cold Spring Harbor Laboratory Press Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204269.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-20 stage 20
stage 20
Myotome
Entry 26 GEISHA Id PAX3.McCabe.2011 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Kathryn L. McCabe, Marianne Bronner. Tetraspanin, CD151, is required for maintenance of trigeminal placode identity. J Neurochem. 2011 April; 117(2): 221230. Copyright © 2011 The Authors. Journal of Neurochemistry © 2011 International Society for Neurochemistry Comments
As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204269.1 ).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-14 stage 14
stage 14
Placode
Entry 27 GEISHA Id PAX3.Alvarez.2003 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Alvares LE, Schubert FR, Thorpe C, Mootoosamy RC, Cheng L, Parkyn G, Lumsden A, Dietrich S. Intrinsic, Hox-dependent cues determine the fate of skeletal muscle precursors. Dev Cell. 2003 Sep;5(3):379-90. Copyright Copyright © 2012 Elsevier B.V. All rights reserved. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204269.1
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-18 stage 18
stage 18
Central Nervous System Somites
Entry 28 GEISHA Id PAX3.Havis.2012 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Havis E, Coumailleau P, Bonnet A, Bismuth K, Bonnin MA, Johnson R, Fan CM, Relaix F, Shi DL, Duprez D. Sim2 prevents entry into the myogenic program by repressing MyoD transcription during limb embryonic myogenesis. Development. 2012 Jun;139(11):1910-20. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204269.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-22 stage 22
stage 22
stage 22
stage 22
stage 22
stage 22
Limb Buds Somites Wing
Entry 29 GEISHA Id PAX3.LIN.2012 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Lin J, Wang C, Redies C Expression of delta-protocadherins in the spinal cord of the chicken embryo. J Comp Neurol. 2012 May 1;520(7):1509-31. Copyright Copyright © 2011 Wiley Periodicals, Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204269.1).
Entry 30 GEISHA Id PAX3.Ferran.2007 Data Source Publication Complete cDNA Template Probe show TCCTATCAGCCCACCTCCATACCGCAAGCCGTGTCTGATCCAAGCAGTACAGTCCATAGACCTCAGCCTCTCCCTCCAA
Citation Ferran JL, Sánchez-Arrones L, Sandoval JE, Puelles L. A model of early molecular regionalization in the chicken embryonic pretectum. J Comp Neurol. 2007 Dec 1;505(4):379-403. Copyright Copyright © 19992012 John Wiley & Sons, Inc. All Rights Reserved. Comments The sequence below was obtained from NCBI (acc #: NM_204269 - Showing 475 bp region from base 951 to 1425) using the information provided in the publication.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-18 stage 17
stage 17
Diencephalon 25 stage 25
stage 25
Forebrain
Entry 31 GEISHA Id PAX3.Reijntjes.2010 Data Source GEISHA ISH Analysis Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Reijntjes S, Francis-West P, Mankoo BS. Retinoic acid is both necessary for and inhibits myogenic commitment and differentiation in the chick limb. Int J Dev Biol. 2010;54(1):125-34 Copyright © 2009 UBC Press Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_204269).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24 stage 22
Limb Buds 25-30 stage 25
stage 25
Limb Buds Somites Spinal Cord 31-44 stage 44
stage 44
Entry 32 GEISHA Id Pax-3.Cauthen.2001 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Cauthen CA, Berdougo E, Sandler J, Burrus LW. Comparative analysis of the expression patterns of Wnts and Frizzleds during early myogenesis in chick embryos. Mech Dev. 2001 Jun;104(1-2):133-8. Copyright Copyright © 2001 Elsevier Science Ireland Ltd. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-12 stage 10
Neural Plate/Tube Somites 31-44 stage 44
Entry 33 GEISHA Id Pax3.Rallis.2001 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Rallis C, Stamataki D, Pontikakis S, Mankoo BS, Karagogeos D. Isolation of the avian homologue of the homeobox gene Mox2 and analysis of its expression pattern in developing somites and limbs. Mech Dev. 2001 Jun;104(1-2):121-4. Copyright Copyright © 2001 Elsevier Science Ireland Ltd. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269.1).
Entry 34 GEISHA Id Pax3.Delfini.2000 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Delfini MC, Duprez D. Paraxis is expressed in myoblasts during their migration and proliferation in the chick limb bud. Mech Dev. 2000 Sep;96(2):247-51. Copyright Copyright © 2000 Elsevier Science Ireland Ltd. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
Entry 35 GEISHA Id Pax-3.Goulding.1994 Data Source GEISHA ISH Analysis Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Goulding M, Lumsden A, Paquette AJ. Regulation of Pax-3 expression in the dermomyotome and its role in muscle development. Development. 1994 Apr;120(4):957-71. Copyright © 1994 by Company of Biologists Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
Entry 36 GEISHA Id Pax-3.Nelson.1996 Data Source Publication Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Nelson CE, Morgan BA, Burke AC, Laufer E, DiMambro E, Murtaugh LC, Gonzales E, Tessarollo L, Parada LF, Tabin C. Analysis of Hox gene expression in the chick limb bud. Development. 1996 May;122(5):1449-66. Copyright Copyright © 1996 by Company of Biologists Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24 stage 23
Leg Neural Plate/Tube 31-44 stage 44
Entry 37 GEISHA Id Pax3.Otto.2006 Data Source Publication Complete cDNA Template Probe show TCAGTGAGCTCCATCAGCCGCATCCTGCGGAGCAAGTTCGGGAAAGGCGAGGAGGAGGAGGCCGAGCTGGAGAGGAAGG
Citation Otto A, Schmidt C, Patel K. Pax3 and Pax7 expression and regulation in the avian embryo. Anat Embryol (Berl). 2006 Aug;211(4):293-310. Copyright Copyright © Springer-Verlag 2006 Comments The complete cDNA template sequence was obtained from the information in the publication as described in Otto et al. 2006.
Entry 38 GEISHA Id PAX3.Liem.1995 Data Source GEISHA ISH Analysis Complete cDNA Template Probe show GAGCGCGCCGCGCCGCCGCGATGACCACGCTGGCCGGGGCCGTGCCCAGGATGATGCGGCCCGGAGCCGGGCAGAGCTA
Citation Liem Jr., K.F, Tremml G, Roelink H, Jessell T.M. Dorsal differentiation of neural plate cells induced by BMP-mediated signals from epidermal ectoderm. Cell. 1995; 82: 969-979. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204269.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-10 stage 10
stage 10
stage 10
stage 10
Neural Plate/Tube Paraxial Mesoderm all
Data from NCBI Unigene EST ProfileGga.69
Mouse Frog Fruit Fly Zebra Finch Zebrafish
