GEISHA - A Chicken Embryo Gene Expression Database
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RAC3
Rac family small GTPase 3

Gene
Official SymbolRAC3
Official Full NameRac family small GTPase 3
CGNC ID49522
also known asCRAC1B, ras-related C3 botulinum toxin substrate 3|GTPase cRac1B|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205016
PolypeptideNP_990347
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.2936
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly38146FBgn0010333
Human5881ENSG00000169750MIM:602050
Mouse170758ENSMUSG00000018012All phenotypic alleles (3):Targeted, knock-out(2) Targeted, other(1) MGI:2180784
Xenopus100101726, 399379490194
Zebrafish795167, 573982, 437027ENSDARG00000020795, ENSDARG00000090062ZDB-GENE-080220-21, ZDB-GENE-050622-10, ZDB-GENE-040718-256ZFIN:ZDB-GENE-080220-21, ZFIN:ZDB-GENE-050622-10, ZFIN:ZDB-GENE-040718-256
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395870
Ensembl GeneENSGALG00000002859
KEGGgga:395870

Entry 1

GEISHA IdRAC3.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTCAGTTACACCACGAATGC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGAAACACCGTCTTCAAGCCCcDNA Template Length446
Forward cDNA Template Probeshow
CCCGCTGTGNAGGGGCAGAGCACTCAAGGTACTTTACCGGAGCCAATCTCCCGAGCCATGGCCAAACCTTGGGGGTAGG
TGATGGGAGCCAGTTTCTTATCACGTAACCTTTCAATGGTGTCCTTATCATCCCTTAAGTCCAGCTTGGTGCCCACCAA
GATGATAGGTGTATTTGGGCAGTGGTGTCGGACCTCAGGGTACCACTTGGCTCTGACATTCTCAAAGGAGGCTGGACTC
ACGAGGGAGAAGCAAATCAAGAAAACATCTGTCTGTGGGTAGGAAAGAGGCCGCAGTCGGTCATAATCCTCTTGTCCTG
CTGTATCCCAGAGGCCTAGATTCACTGGCTTCCCATCTACCATGACATTGGCAGAATAGTTATCAAATACAGTGGGGAT
GTACTCTCCAGGAAAGGCATTCGTGGTGTAACTGAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 5
stage 5
Area Pellucida
Extraembryonic Mesoderm
Primitive Streak
Low level expression.
Stage 5+.
7-12
stage 8
stage 8
stage 9
stage 9
stage 9
stage 9
stage 11
Anterior Intestinal Portal
Extraembryonic Mesoderm
Forebrain
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Somites
faint staining
low expression
13-18
stage 16
stage 16
Forebrain
Hindbrain
Midbrain
Myotome
Neural Plate/Tube
Somites
Spinal Ganglia and Nerves
Wing Mesenchyme
 
19-24
stage 20
stage 21
stage 21
stage 21
Hindbrain
Myotome
Neural Plate/Tube
Pharyngeal Arches and Clefts
Spinal Cord
Spinal Ganglia and Nerves
motor horns
25-26
stage 26
Myotome
Outflow Tract
Pharyngeal Arches and Clefts
Spinal Ganglia and Nerves
 

Entry 2

GEISHA IdRac1B.McKinnell.2004Data SourcePublication
Forward cDNA Template Probeshow
TCTCGGCGGCGCGCCATCGCGGGCAGATGCAGGCGATCAAGTGTGTGGTGGTGGGCGACGGAGCTGTAGGGAAGACCTG
CTTGCTGATCAGTTACACCACGAATGCCTTTCCTGGAGAGTACATCCCCACTGTATTTGATAACTATTCTGCCAATGTC
ATGGTAGATGGGAAGCCAGTGAATCTAGGCCTCTGGGATACAGCAGGACAAGAGGATTATGACCGACTGCGGCCTCTTT
CCTACCCACAGACAGATGTTTTCTTGATTTGCTTCTCCCTCGTGAGTCCAGCCTCCTTTGAGAATGTCAGAGCCAAGTG
GTACCCTGAGGTCCGACACCACTGCCCAAATACACCTATCATCTTGGTGGGCACCAAGCTGGACTTAAGGGATGATAAG
GACACCATTGAAAGGTTACGTGATAAGAAACTGGCTCCCATCACCTACCCCCAAGGTTTGGCCATGGCTCGGGAGATTG
GCTCGGTAAAGTACCTTGAGTGCTCTGCCCTGACACAGCGGGGCTTGAAGACGGTGTTTGATGAAGCCATCCGGGCTGT
GCTCTGCCCACCGCCCGTGAAGAAGCCTGGCAAAAAGTGCACCGTGTTCTGAGGGCTGTGGCCTAGGTGCTGG
CitationMcKinnell IW, Makarenkova H, de Curtis I, Turmaine M, Patel K. EphA4, RhoB and the molecular development of feather buds are maintained by the integrity of the actin cytoskeleton. Dev Biol. 2004 Jun 1;270(1):94-105.
CopyrightReprinted from Developmental Biology, Volume 270, Issue 1, Iain W. McKinnell, Helen Makarenkova, Ivan de Curtis, Makr Turmaine, and Ketan Patel, EphA4, RhoB and the molecular development of feather buds are maintained by the integrity of the actin cytoskeleton, Pages 94-105, Copyright 2004, with permission from Elsevier. Copyright © 2004 Elsevier B.V. All rights reserved.
CommentsAuthors said: Rac1B (576 bp-chick orthologue of mammalian Rac3). Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # U79756.1)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 28
stage 28
stage 30
Unlabeled
 
31
stage 31
stage 31
Feathers/Scutae
Neural Plate/Tube
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.2936

Mouse

Emage
EurexpressMGI:2180784
MGI GXDMGI:2180784

Frog

Xenbase490194

Fruit Fly

BDGPFBgn0010333

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-080220-21, ZDB-GENE-050622-10, ZDB-GENE-040718-256
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