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ALDH1A3 Gene Summary Expression Transcript Levels Other Species Expression JBrowse Gene Official Symbol ALDH1A3 Official Full Name aldehyde dehydrogenase 1 family member A3 CGNC ID 49294 also known as ALDH6, aldehyde dehydrogenase family 1 member A3|aldehyde dehydrogenase-6|retinaldehyde dehydrogenase 3, ALDH1A3, aldehyde dehydrogenase 1 family, member A3 gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Molecular Function Biological Process Cellular Component
Links to other databases
Entry 1 GEISHA Id ChEST859m18 Data Source GEISHA ISH Analysis Forward cDNA Template Probe show AAGCAGGATTTAGTGGTGTCAGCTGGTTAGGAAGTTCATCTGATCTTGCTAGGCTCATCCTCTGCAAGCAAAGTGATGC
Comments No specific expression detected stages 5, 6.
Entry 2 GEISHA Id RALDH3.Blentic.2003 Data Source Publication Complete cDNA Template Probe show GGGGGGGGTTGGCAGAAGTGGGGTCTGGGCTCGACGGGGTGGGTATGGCCGCGGTCAACGGTGCTGTGGAGAACGGGCC
Citation Blentic A, Gale E, Maden M. Retinoic acid signalling centres in the avian embryo identified by sites of expression of synthesising and catabolising enzymes. Dev Dyn. 2003 May;227(1):114-27. Copyright Copyright © 2003 John Wiley & Sons, Inc. All Rights Reserved. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204669)
Entry 3 GEISHA Id RALDH3.Mou.2011 Data Source Publication Complete cDNA Template Probe show GGGGGGGGTTGGCAGAAGTGGGGTCTGGGCTCGACGGGGTGGGTATGGCCGCGGTCAACGGTGCTGTGGAGAACGGGCC
Citation Mou C, Pitel F, Gourichon D, Vignoles F, Tzika A, Tato P, Yu L, Burt DW, Bed'hom B, Tixier-Boichard M, Painter KJ, Headon DJ. Cryptic patterning of avian skin confers a developmental facility for loss of neck feathering. PLoS Biol. 2011 Mar;9(3):e1001028. Epub 2011 Mar 15. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204669).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-30 stage 30
stage 30
Surface Ectoderm 31-34 stage 34
Surface Ectoderm
Entry 4 GEISHA Id RALDH3.Sabado.2012 Data Source Publication Complete cDNA Template Probe show GGGGGGGGTTGGCAGAAGTGGGGTCTGGGCTCGACGGGGTGGGTATGGCCGCGGTCAACGGTGCTGTGGAGAACGGGCC
Citation Sabado V, Barraud P, Baker CV, Streit A. Specification of GnRH-1 neurons by antagonistic FGF and retinoic acid signaling. Dev Biol. 2012 Feb 15;362(2):254-62.
Entry 5 GEISHA Id RALDH3.Christophorou.2009 Data Source Publication Complete cDNA Template Probe show GGGGGGGGTTGGCAGAAGTGGGGTCTGGGCTCGACGGGGTGGGTATGGCCGCGGTCAACGGTGCTGTGGAGAACGGGCC
Citation Christophorou NA, Bailey AP, Hanson S, Streit A. Activation of Six1 target genes is required for sensory placode formation. Dev Biol. 2009 Dec 15;336(2):327-36. doi: 10.1016/j.ydbio.2009.09.025. Epub 2009 Sep 23. Copyright Copyright © 2013 Elsevier B.V. All rights reserved. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204669.1
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 4 stage 4
stage 4
Nasal Placode/Nerve
Entry 6 GEISHA Id RALDH3.Sánchez-Guardado.2009 Data Source Publication Complete cDNA Template Probe show GGGGGGGGTTGGCAGAAGTGGGGTCTGGGCTCGACGGGGTGGGTATGGCCGCGGTCAACGGTGCTGTGGAGAACGGGCC
Citation Sánchez-Guardado LO, Ferran JL, Mijares J, Puelles L, Rodríguez-Gallardo L, Hidalgo-Sánchez M. Raldh3 gene expression pattern in the developing chicken inner ear. J Comp Neurol. 2009 May 1;514(1):49-65. doi: 10.1002/cne.21984. Copyright Copyright © 19992013 John Wiley & Sons, Inc. All Rights Reserved. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204669.1
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-18 stage 18
stage 18
Ear/Otic Placode Eye 19-24 stage 20
stage 21
stage 21
stage 24
stage 24
stage 24
stage 24
Ear/Otic Placode 25-30 stage 27
stage 27
stage 27
stage 27
stage 27
Ear/Otic Placode 31-34 stage 34
stage 34
stage 34
stage 34
stage 34
stage 34
stage 34
Ear/Otic Placode
Entry 7 GEISHA Id RALDH3.Sjödal.2008 Data Source Publication Complete cDNA Template Probe show GGCAGAAGTGGGGTCTGGGCTCGACGGGGTGGGTATGGCCGCGGTCAACGGTGCTGTGGAGAACGGGCCGCCTGACAAG
Citation Sjödal M, Gunhaga L. Expression patterns of Shh, Ptc2, Raldh3, Pitx2, Isl1, Lim3 and Pax6 in the developing chick hypophyseal placode and Rathke’s pouch. Gene Expr Patterns. 2008 Sep;8(7-8):481-5. Epub 2008 Jul 4.. DOI: 10.1016/j.gep.2008.06.007. Copyright Copyright © 2008 Elsevier B.V. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204669). Raldh3 is also known as ALDH1A3 in NCBI.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-18 stage 13
stage 17
Ectoderm 19-24 stage 20
stage 24
Ectoderm all
Entry 8 GEISHA Id RALDH3.Smith.2018 Data Source Publication Complete cDNA Template Probe show TCTGAGGGGTTTGGAGGTGAAGTACACCAAGATATTTATAAACAATGAATGGCACGAGTCTACCAGTGGAAAGAAGTTC
Citation Jonathan N Smith, Heather M Walker, Hannah Thompson, J Martin Collinson, Neil Vargesson, Lynda Erskine. Lens-regulated retinoic acid signalling controls expansion of the developing eye. Development. 2018 Oct 10;145(19):dev167171. DOI: 10.1242/dev.167171. Copyright Copyright © 2018. Published by The Company of Biologists Ltd. Comments The complete cDNA template sequence was obtained from the information from the publication as described in Smith et al. 2018. RALDH3 is also known as ALDH1A3.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-23 stage 23
Retina all
Data from NCBI Unigene EST ProfileGga.3807
Mouse Frog Fruit Fly Zebra Finch Zebrafish
