GEISHA - A Chicken Embryo Gene Expression Database
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_

RET
ret proto-oncogene

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolRET
Official Full Nameret proto-oncogene
CGNC ID1837
also known asproto-oncogene tyrosine-protein kinase receptor Ret, ret proto-oncogene
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205190
PolypeptideNP_990521
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.654
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human5979ENSG00000165731MIM:209880MIM:164761
Mouse19713ENSMUSG00000030110All phenotypic alleles (42):Targeted, knock-out(5) Targeted, other(37) MGI:97902
Xenopus100495902, 373625485175
Zebrafish30512ENSDARG00000055305ZDB-GENE-980526-307ZFIN:ZDB-GENE-980526-307
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene396107
Ensembl GeneENSGALG00000002555
KEGGgga:396107

Entry 1

GEISHA IdRET.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerACAGGGGAGTGGAAAAGGAATC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGAGGCTCTCTCATCGGGGTTATCcDNA Template Length908
Forward cDNA Template Probeshow
GGAATTTCTGGTTGCCATCACTACCCACGNTAGCTTGGTCCCACTTTTCGGCTTTCCCTGAGAAAAACTGCGCAAGGAG
CCATATTTAGCATATTCCACAATTAAATAGAGCGGGCCATCTTGACTGCAGGCTCCGTAAAGTTTGATGACGTGAGGAT
GGTTCACCTGTTTCAAAAGGTTGAACTCTGACAGCAGATCTCGCAGCTCGCTCTGGGAAGCATTTTCTTTTAGCATTTT
CACAGCCACAGTAGTATAGCCAGCTCTTCCCTTGAGTCTGAAAGCTGTTGCCTTGACAACCTTCCCAAATTCTCCTTCT
CCAAGAGTCTTGCCTAGAACCAGGTTCTTCCGAGGGAATTCCCACTTTGGATCTTCTGGTATCTTAAAGGTGTCTACAG
ACACCTGGTTCTCCATGGAGTCTAAAGAAGGTCGACGGACATTAGTAGAAGAATAACTGATGGGATATGACTGGGCTGG
GCGCCGGAATGTCATTTCTGCAGAGGCAATAGGTGGCTTTGGAGAATTCTTGTGGTAGCGATGGATGAAATAGGAAGAA
AGCAGCACAGAGATGATGAAGGACAACAGCACCGCCCCTGCTATCACAGTCTTGCACACTTCATCACAAAATTGCTCCT
TGATATCATCTTTCTCACAATAACAGTTCTGTCTTGGGAAGCAGTAACAAATCCCATGTCCTGACTTAATTCCAAGGTT
TCCAGTGCCTTTCCCATGACCACCAATAATATTTCCATTTGTGCAGTCCTGGGGGCAAATAGCTGGATCTTTGCTCTCC
ACGATATCACAGGTGCCATCTGGACAAGTCTTGATACTTGGGGTGCATGTGGAATAGTTTGTGGTGATTCCTTTTCACN
CCCC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 5
Notochord
Paraxial Mesoderm
 
7-12
stage 8
stage 9
stage 11
stage 11
stage 11
stage 11
stage 11
stage 11
Ear/Otic Placode
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Nephric Ducts
Neural Crest
Neural Plate/Tube
Notochord
Somites
Spinal Cord
 
13-18
stage 14
stage 14
stage 14
stage 15
stage 15
stage 15
stage 15
stage 15
stage 17
stage 17
stage 17
stage 17
Cranial PNS
Ear/Otic Placode
Foregut
Hindbrain
Intermediate Mesoderm
Isthmus/MHB
Midbrain
Nephric Ducts
Neural Crest
Pharyngeal Arches and Clefts
Somites
Spinal Cord
neural crest in foregut
19-24
stage 22
stage 22
stage 22
stage 22
stage 22
stage 23
stage 23
stage 23
Cranial PNS
Ear/Otic Placode
Forebrain
Gizzard
Hindbrain
Lung
Midbrain
Neural Crest
Pharyngeal Arches and Clefts
Spinal Cord
Spinal Ganglia and Nerves
Trunk Mesenchyme
neural crest in gizzard
25-26
stage 26
stage 26
Cranial PNS
Ear/Otic Placode
Forebrain
Hindbrain
Midbrain
Neural Crest
Spinal Cord
Spinal Ganglia and Nerves
Trunk Mesenchyme
neural crest in foregut

Entry 2

GEISHA IdRET.Homma.2000Data SourcePublication
Complete cDNA Template Probeshow
CTGCCCGGAGCGCCTGTGGCCCAGGAAGATGCGCTCGGTGCGGGGGGCGGCCGGCCTCCTGCTGCTGTGCGGGGCTTCC
TTTGGTCTGTACTTCCCCAGAAAGGAGTACTCAGAGAACGTCTACATTGACCAGCCAGCAGGTGCGCCGCTCCTACGCA
TCCACGCCTTGAGGGATTCACATGGGAAACAGCCCACTTTCATCTGTGCCAGAAGTCTCATCATTTCTCGAGCAAGATC
CCATGAAAATCACTGGTTTCAAATCAGAGAAAAAATGGGACTTCTCTACCTCAGCAAGAGCCTAGATAGAGAAGACTTT
AACATGCTGTCTGTAGGAAACTGGATGCCATTATCAAAGGTGATGCTGTATGTCTTCCTCTCATCTCACCCTTTCCAAG
AGAAGGAATGTGACTCTGCTACTCGTACCACAGTCGTCCTCTCTTTGATCAATGCTACTGCACCAGCTTGCAGTTCACT
GTCAGCAAGGCAGCTTTGCTTCACAGAAATGGATCTCTCCTTTCACATCAAGGAGAATAAACCCCCTGGTACATTTCAT
CAGCTCCAGTTACCCTCAGTTCATCATCTGTGTCAGAATCTCAGCATTACCTACAAACTGTTGGCAGCCGAAGGCCTGC
CTTTTCGGTACAATGAGAACACCACTGGTGTGAGTGTAACACAGCGCCTAGATCGAGAGGAGAGAGAGAGATATGAGCT
GATCGCCAAATGCACCGTGAGAGAAGGCTTCAGGGAAATGGAGGTTGAGGTGCCCTTCCTCGTCAACGTGTTAGATGAA
GATGACTCTCCTCCCTTCCTTCCCAACGGCACTGACACTGCAGATGCTGTCGTGGAGTTCAATAGAAAAGAGGGAACTG
TCCTTGCAACGCTAACTGTGTATGATGCAGACACCACACCTATTTATCCCCTTGAAAGCAGCAGAAAGAAATACACAGG
AACAATAATTACTGACGATCCATGGATAAATGAAACATTTCGGGTGGAGCACATTTTCGATGAAATCCACTTCAGCCCA
AATGGCAGCCAAGAGAGAGGAACTCAACACGAATACAAACTGGTACTGAATAAAAGTATTTCAGTCACAGAGCATCGTT
CCTTCCAGTTGGATGTTTTGGTGAACGACACAGAATTTAATGGCCCAGAAAAATCAGTGATGCTTCATTTCAATGTCTC
CATCCTTCCTGTCAGCATTCAGTTTCCAAACACAACTTATCGATTCACAGTAAACAGAAATGCTCAACGTTTTGCACAA
ATAGGAAAAATCTGCATCGAAAACTGTATGAAGTTCCGTGGTGTGAACATCACCTACAAGTTACTGTCCCCCAATGTGA
GCTGCTATGCTGTTGGCATACTTCAAGGCCGAGAAGACAAATATGGAAGCCTTTATGTGAATGATTCCTCTGTGCTACT
TAGACCTGAATGCAAAGAAATACAATACACCGTTCAAGCTACAGACAAGCAGAGCAGGAAACATACCAAAACCCTTTTC
ACTGTTGTATTAGAAGGAACTCTTTTTAAAAAAGAAGAGGACTGCCCTGACTCTTGTGCTATGAGTAAGCACCTTGCTG
AATGTGAAGAGTGTGGTGGCCTGGGAGTGCTAACAGGAAGATGCCAGTGGAGACAGGGGAGTGGAAAAGGAATCACCAC
AAACTATTCCACATGCACCCCAAGTATCAAGAACTTGCTCCAGATGGCCACCTGTGATATCGTGGAGAGCAAAGATCCA
GCTATTTGCCCCCAGGACTGCACAAATGGAAATATTATTGGTGGTCATGGGAAAGGCACTGGAAACCTTGGAATTAAGT
CAGGACATGGGATTTGTTACTGCTTCCCAAGACAGAACTGTTATTGTGAGAAAGATGATATCAAGGAGCAATTTTGTGA
TGAAGTGTGCAAGACTGTGATAGCAGGGGCGGTGCTGTTGTCCTTCATCATCTCTGTGCTGCTTTCTTCCTATTTCATC
CATCGCTACCACAAGAATTCTCCAAAGCCACCTATTGCCTCTGCAGAAATGACATTCCGGCGCCCAGCCCAGTCATATC
CCATCAGTTATTCTTCTACTAATGTCCGTCGACCTTCTTTAGACTCCATGGAGAACCAGGTGTCTGTAGACACCTTTAA
GATACCAGAAGATCCAAAGTGGGAATTCCCTCGGAAGAACCTGGTTCTAGGCAAGACTCTTGGAGAAGGAGAATTTGGG
AAGGTTGTCAAGGCAACAGCTTTCAGACTCAAGGGAAGAGCTGGCTATACTACTGTGGCTGTGAAAATGCTAAAAGAAA
ATGCTTCCCAGAGCGAGCTGCGAGATCTGCTGTCAGAGTTCAACCTTTTGAAACAGGTGAACCATCCTCACGTCATCAA
ACTTTACGGAGCCTGCAGTCAAGATGGCCCGCTCTATTTAATTGTGGAATATGCTAAATATGGCTCCTTGCGCAGTTTT
CTCAGGGAAAGCCGAAAAGTGGGACCAAGCTACGTGGGTAGTGATGGCAACAGAAATTCCAGTTACTTGGATAACCCCG
ATGAGAGAGCCTTAACAATGGGAGATCTGATATCGTTTGCATGGCAGATATCACGAGGGATGCAGTACCTGGCAGAAAT
GAAGCTCGTCCATCGTGACTTAGCAGCCAGGAATGTGCTGGTGGCAGAAGGGCGCAAAATGAAGATTTCTGATTTTGGC
CTATCCCGTGATGTGTATGAAGAAGATTCCTATGTCAAGAGGAGCAAGGGTCGGATACCTGTTAAATGGATGGCCATAG
AATCCCTGTTTGATCATATCTATACAACACAAAGTGATGTGTGGTCGTTTGGAGTTCTGCTCTGGGAGATTGTAACTCT
GGGAGGCAATCCCTACCCAGGTATTGCTCCTGAAAGACTCTTTAACCTCCTAAAAACAGGCTACAGAATGGAGAGACCA
GAAAACTGTAGTGAAGAAATGTACAACCTGATGTTGCGCTGCTGGAAGCAAGAACCAGATAAAAGGCCAACATTTGCTG
AGATCAGCAAGGAACTGGAGAAAATGATGGTGAAGAGTAGGGACTACTTAGATCTTGCGGCTTCCACCCCTTCTGATTC
CTTACTATATGATGATGGGCTCTCAGAAGAGGAGACACCTCTCGTGGACTGTAATAACGCTCCCCTCCCTCGAACCCTT
CCTTCCACATGGATTGAAAACAAACTCTATGGTAGAATTTCACATGCATTTACTAGATTCTAGCAACACACACACACAC
ACACAGTTTTCTCTTCTTTACTGTTCTCAGACTCTGTAACCCCATTACAGTGTTTCTTGTCTGAACGAAGCCAATCAAA
ATTTGCTTGGAAGCTTCTTTTGGG
CitationHomma S, Oppenheim RW, Yaginuma H, Kimura S. Expression pattern of GDNF, c-ret, and GFRalphas suggests novel roles for GDNF ligands during early organogenesis in the chick embryo. Dev Biol. 2000 Jan 1;217(1):121-37.
CopyrightReprinted with permission from Elsevier. Copyright © 2000 Elsevier B.V. All rights reserved.
CommentsAccording to the authors, "A plasmid encoding the extracellular domain of the chick c-ret proto-oncogene was a generous gift from Dr. F. Costantini. Digoxigenin-labeled riboprobes were synthesized from the linearized template with SacI using T3 RNA polymerase (antisense probe) and KpnI-linearized template using T7 RNA polymerase (sense control probe)." As information provided was insufficient to verify exact sequence used to synthesize probe,the sequence below was obtained from NCBI (NM_205190).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 9
Isthmus/MHB
Midbrain
Nephric Ducts
Pharyngeal Arches and Clefts
Rhombomeres
Spinal Cord
Surface Ectoderm
Trunk Mesenchyme
PA ectoderm
PA mesoderm
13-18
stage 13
stage 18
stage 18
Cranial Ganglion
Ear/Otic Placcode
Head Mesenchyme
Hindbrain
Isthmus/MHB
Midbrain
Nephric Ducts
Neural Crest
Pharyngeal Arches and Clefts
Somites
Spinal Cord
Spinal Ganglia and Nerves
Surface Ectoderm
Distal Ganglia of the Facial (VII), Glossopharyngeal (IX), and Vagus (X) Nerves
Dorsal Root Ganglia
Epibranchial Placode
Trigeminal Ganglion

Entry 3

GEISHA IdRET.Burns.2005Data SourcePublication
Complete cDNA Template Probeshow
CTGCCCGGAGCGCCTGTGGCCCAGGAAGATGCGCTCGGTGCGGGGGGCGGCCGGCCTCCTGCTGCTGTGCGGGGCTTCC
TTTGGTCTGTACTTCCCCAGAAAGGAGTACTCAGAGAACGTCTACATTGACCAGCCAGCAGGTGCGCCGCTCCTACGCA
TCCACGCCTTGAGGGATTCACATGGGAAACAGCCCACTTTCATCTGTGCCAGAAGTCTCATCATTTCTCGAGCAAGATC
CCATGAAAATCACTGGTTTCAAATCAGAGAAAAAATGGGACTTCTCTACCTCAGCAAGAGCCTAGATAGAGAAGACTTT
AACATGCTGTCTGTAGGAAACTGGATGCCATTATCAAAGGTGATGCTGTATGTCTTCCTCTCATCTCACCCTTTCCAAG
AGAAGGAATGTGACTCTGCTACTCGTACCACAGTCGTCCTCTCTTTGATCAATGCTACTGCACCAGCTTGCAGTTCACT
GTCAGCAAGGCAGCTTTGCTTCACAGAAATGGATCTCTCCTTTCACATCAAGGAGAATAAACCCCCTGGTACATTTCAT
CAGCTCCAGTTACCCTCAGTTCATCATCTGTGTCAGAATCTCAGCATTACCTACAAACTGTTGGCAGCCGAAGGCCTGC
CTTTTCGGTACAATGAGAACACCACTGGTGTGAGTGTAACACAGCGCCTAGATCGAGAGGAGAGAGAGAGATATGAGCT
GATCGCCAAATGCACCGTGAGAGAAGGCTTCAGGGAAATGGAGGTTGAGGTGCCCTTCCTCGTCAACGTGTTAGATGAA
GATGACTCTCCTCCCTTCCTTCCCAACGGCACTGACACTGCAGATGCTGTCGTGGAGTTCAATAGAAAAGAGGGAACTG
TCCTTGCAACGCTAACTGTGTATGATGCAGACACCACACCTATTTATCCCCTTGAAAGCAGCAGAAAGAAATACACAGG
AACAATAATTACTGACGATCCATGGATAAATGAAACATTTCGGGTGGAGCACATTTTCGATGAAATCCACTTCAGCCCA
AATGGCAGCCAAGAGAGAGGAACTCAACACGAATACAAACTGGTACTGAATAAAAGTATTTCAGTCACAGAGCATCGTT
CCTTCCAGTTGGATGTTTTGGTGAACGACACAGAATTTAATGGCCCAGAAAAATCAGTGATGCTTCATTTCAATGTCTC
CATCCTTCCTGTCAGCATTCAGTTTCCAAACACAACTTATCGATTCACAGTAAACAGAAATGCTCAACGTTTTGCACAA
ATAGGAAAAATCTGCATCGAAAACTGTATGAAGTTCCGTGGTGTGAACATCACCTACAAGTTACTGTCCCCCAATGTGA
GCTGCTATGCTGTTGGCATACTTCAAGGCCGAGAAGACAAATATGGAAGCCTTTATGTGAATGATTCCTCTGTGCTACT
TAGACCTGAATGCAAAGAAATACAATACACCGTTCAAGCTACAGACAAGCAGAGCAGGAAACATACCAAAACCCTTTTC
ACTGTTGTATTAGAAGGAACTCTTTTTAAAAAAGAAGAGGACTGCCCTGACTCTTGTGCTATGAGTAAGCACCTTGCTG
AATGTGAAGAGTGTGGTGGCCTGGGAGTGCTAACAGGAAGATGCCAGTGGAGACAGGGGAGTGGAAAAGGAATCACCAC
AAACTATTCCACATGCACCCCAAGTATCAAGAACTTGCTCCAGATGGCCACCTGTGATATCGTGGAGAGCAAAGATCCA
GCTATTTGCCCCCAGGACTGCACAAATGGAAATATTATTGGTGGTCATGGGAAAGGCACTGGAAACCTTGGAATTAAGT
CAGGACATGGGATTTGTTACTGCTTCCCAAGACAGAACTGTTATTGTGAGAAAGATGATATCAAGGAGCAATTTTGTGA
TGAAGTGTGCAAGACTGTGATAGCAGGGGCGGTGCTGTTGTCCTTCATCATCTCTGTGCTGCTTTCTTCCTATTTCATC
CATCGCTACCACAAGAATTCTCCAAAGCCACCTATTGCCTCTGCAGAAATGACATTCCGGCGCCCAGCCCAGTCATATC
CCATCAGTTATTCTTCTACTAATGTCCGTCGACCTTCTTTAGACTCCATGGAGAACCAGGTGTCTGTAGACACCTTTAA
GATACCAGAAGATCCAAAGTGGGAATTCCCTCGGAAGAACCTGGTTCTAGGCAAGACTCTTGGAGAAGGAGAATTTGGG
AAGGTTGTCAAGGCAACAGCTTTCAGACTCAAGGGAAGAGCTGGCTATACTACTGTGGCTGTGAAAATGCTAAAAGAAA
ATGCTTCCCAGAGCGAGCTGCGAGATCTGCTGTCAGAGTTCAACCTTTTGAAACAGGTGAACCATCCTCACGTCATCAA
ACTTTACGGAGCCTGCAGTCAAGATGGCCCGCTCTATTTAATTGTGGAATATGCTAAATATGGCTCCTTGCGCAGTTTT
CTCAGGGAAAGCCGAAAAGTGGGACCAAGCTACGTGGGTAGTGATGGCAACAGAAATTCCAGTTACTTGGATAACCCCG
ATGAGAGAGCCTTAACAATGGGAGATCTGATATCGTTTGCATGGCAGATATCACGAGGGATGCAGTACCTGGCAGAAAT
GAAGCTCGTCCATCGTGACTTAGCAGCCAGGAATGTGCTGGTGGCAGAAGGGCGCAAAATGAAGATTTCTGATTTTGGC
CTATCCCGTGATGTGTATGAAGAAGATTCCTATGTCAAGAGGAGCAAGGGTCGGATACCTGTTAAATGGATGGCCATAG
AATCCCTGTTTGATCATATCTATACAACACAAAGTGATGTGTGGTCGTTTGGAGTTCTGCTCTGGGAGATTGTAACTCT
GGGAGGCAATCCCTACCCAGGTATTGCTCCTGAAAGACTCTTTAACCTCCTAAAAACAGGCTACAGAATGGAGAGACCA
GAAAACTGTAGTGAAGAAATGTACAACCTGATGTTGCGCTGCTGGAAGCAAGAACCAGATAAAAGGCCAACATTTGCTG
AGATCAGCAAGGAACTGGAGAAAATGATGGTGAAGAGTAGGGACTACTTAGATCTTGCGGCTTCCACCCCTTCTGATTC
CTTACTATATGATGATGGGCTCTCAGAAGAGGAGACACCTCTCGTGGACTGTAATAACGCTCCCCTCCCTCGAACCCTT
CCTTCCACATGGATTGAAAACAAACTCTATGGTAGAATTTCACATGCATTTACTAGATTCTAGCAACACACACACACAC
ACACAGTTTTCTCTTCTTTACTGTTCTCAGACTCTGTAACCCCATTACAGTGTTTCTTGTCTGAACGAAGCCAATCAAA
ATTTGCTTGGAAGCTTCTTTTGGG
CitationBurns AJ, Delalande JM (2005). Neural crest cell origin for intrinsic ganglia of the developing chicken lung. Dev Biol. 2005 Jan 1;277(1):63-79.
CopyrightCopyright © 2004 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_205190).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 26
stage 30
Gut
Lung
gut mesenchyme
31-35
stage 35
stage 35
Gut
Lung
Spinal Ganglia and Nerves
enteric ganglia
presumptive neurons

Entry 4

GEISHA IdRET.Wilm.2004Data SourcePublication
Complete cDNA Template Probeshow
CTGCCCGGAGCGCCTGTGGCCCAGGAAGATGCGCTCGGTGCGGGGGGCGGCCGGCCTCCTGCTGCTGTGCGGGGCTTCC
TTTGGTCTGTACTTCCCCAGAAAGGAGTACTCAGAGAACGTCTACATTGACCAGCCAGCAGGTGCGCCGCTCCTACGCA
TCCACGCCTTGAGGGATTCACATGGGAAACAGCCCACTTTCATCTGTGCCAGAAGTCTCATCATTTCTCGAGCAAGATC
CCATGAAAATCACTGGTTTCAAATCAGAGAAAAAATGGGACTTCTCTACCTCAGCAAGAGCCTAGATAGAGAAGACTTT
AACATGCTGTCTGTAGGAAACTGGATGCCATTATCAAAGGTGATGCTGTATGTCTTCCTCTCATCTCACCCTTTCCAAG
AGAAGGAATGTGACTCTGCTACTCGTACCACAGTCGTCCTCTCTTTGATCAATGCTACTGCACCAGCTTGCAGTTCACT
GTCAGCAAGGCAGCTTTGCTTCACAGAAATGGATCTCTCCTTTCACATCAAGGAGAATAAACCCCCTGGTACATTTCAT
CAGCTCCAGTTACCCTCAGTTCATCATCTGTGTCAGAATCTCAGCATTACCTACAAACTGTTGGCAGCCGAAGGCCTGC
CTTTTCGGTACAATGAGAACACCACTGGTGTGAGTGTAACACAGCGCCTAGATCGAGAGGAGAGAGAGAGATATGAGCT
GATCGCCAAATGCACCGTGAGAGAAGGCTTCAGGGAAATGGAGGTTGAGGTGCCCTTCCTCGTCAACGTGTTAGATGAA
GATGACTCTCCTCCCTTCCTTCCCAACGGCACTGACACTGCAGATGCTGTCGTGGAGTTCAATAGAAAAGAGGGAACTG
TCCTTGCAACGCTAACTGTGTATGATGCAGACACCACACCTATTTATCCCCTTGAAAGCAGCAGAAAGAAATACACAGG
AACAATAATTACTGACGATCCATGGATAAATGAAACATTTCGGGTGGAGCACATTTTCGATGAAATCCACTTCAGCCCA
AATGGCAGCCAAGAGAGAGGAACTCAACACGAATACAAACTGGTACTGAATAAAAGTATTTCAGTCACAGAGCATCGTT
CCTTCCAGTTGGATGTTTTGGTGAACGACACAGAATTTAATGGCCCAGAAAAATCAGTGATGCTTCATTTCAATGTCTC
CATCCTTCCTGTCAGCATTCAGTTTCCAAACACAACTTATCGATTCACAGTAAACAGAAATGCTCAACGTTTTGCACAA
ATAGGAAAAATCTGCATCGAAAACTGTATGAAGTTCCGTGGTGTGAACATCACCTACAAGTTACTGTCCCCCAATGTGA
GCTGCTATGCTGTTGGCATACTTCAAGGCCGAGAAGACAAATATGGAAGCCTTTATGTGAATGATTCCTCTGTGCTACT
TAGACCTGAATGCAAAGAAATACAATACACCGTTCAAGCTACAGACAAGCAGAGCAGGAAACATACCAAAACCCTTTTC
ACTGTTGTATTAGAAGGAACTCTTTTTAAAAAAGAAGAGGACTGCCCTGACTCTTGTGCTATGAGTAAGCACCTTGCTG
AATGTGAAGAGTGTGGTGGCCTGGGAGTGCTAACAGGAAGATGCCAGTGGAGACAGGGGAGTGGAAAAGGAATCACCAC
AAACTATTCCACATGCACCCCAAGTATCAAGAACTTGCTCCAGATGGCCACCTGTGATATCGTGGAGAGCAAAGATCCA
GCTATTTGCCCCCAGGACTGCACAAATGGAAATATTATTGGTGGTCATGGGAAAGGCACTGGAAACCTTGGAATTAAGT
CAGGACATGGGATTTGTTACTGCTTCCCAAGACAGAACTGTTATTGTGAGAAAGATGATATCAAGGAGCAATTTTGTGA
TGAAGTGTGCAAGACTGTGATAGCAGGGGCGGTGCTGTTGTCCTTCATCATCTCTGTGCTGCTTTCTTCCTATTTCATC
CATCGCTACCACAAGAATTCTCCAAAGCCACCTATTGCCTCTGCAGAAATGACATTCCGGCGCCCAGCCCAGTCATATC
CCATCAGTTATTCTTCTACTAATGTCCGTCGACCTTCTTTAGACTCCATGGAGAACCAGGTGTCTGTAGACACCTTTAA
GATACCAGAAGATCCAAAGTGGGAATTCCCTCGGAAGAACCTGGTTCTAGGCAAGACTCTTGGAGAAGGAGAATTTGGG
AAGGTTGTCAAGGCAACAGCTTTCAGACTCAAGGGAAGAGCTGGCTATACTACTGTGGCTGTGAAAATGCTAAAAGAAA
ATGCTTCCCAGAGCGAGCTGCGAGATCTGCTGTCAGAGTTCAACCTTTTGAAACAGGTGAACCATCCTCACGTCATCAA
ACTTTACGGAGCCTGCAGTCAAGATGGCCCGCTCTATTTAATTGTGGAATATGCTAAATATGGCTCCTTGCGCAGTTTT
CTCAGGGAAAGCCGAAAAGTGGGACCAAGCTACGTGGGTAGTGATGGCAACAGAAATTCCAGTTACTTGGATAACCCCG
ATGAGAGAGCCTTAACAATGGGAGATCTGATATCGTTTGCATGGCAGATATCACGAGGGATGCAGTACCTGGCAGAAAT
GAAGCTCGTCCATCGTGACTTAGCAGCCAGGAATGTGCTGGTGGCAGAAGGGCGCAAAATGAAGATTTCTGATTTTGGC
CTATCCCGTGATGTGTATGAAGAAGATTCCTATGTCAAGAGGAGCAAGGGTCGGATACCTGTTAAATGGATGGCCATAG
AATCCCTGTTTGATCATATCTATACAACACAAAGTGATGTGTGGTCGTTTGGAGTTCTGCTCTGGGAGATTGTAACTCT
GGGAGGCAATCCCTACCCAGGTATTGCTCCTGAAAGACTCTTTAACCTCCTAAAAACAGGCTACAGAATGGAGAGACCA
GAAAACTGTAGTGAAGAAATGTACAACCTGATGTTGCGCTGCTGGAAGCAAGAACCAGATAAAAGGCCAACATTTGCTG
AGATCAGCAAGGAACTGGAGAAAATGATGGTGAAGAGTAGGGACTACTTAGATCTTGCGGCTTCCACCCCTTCTGATTC
CTTACTATATGATGATGGGCTCTCAGAAGAGGAGACACCTCTCGTGGACTGTAATAACGCTCCCCTCCCTCGAACCCTT
CCTTCCACATGGATTGAAAACAAACTCTATGGTAGAATTTCACATGCATTTACTAGATTCTAGCAACACACACACACAC
ACACAGTTTTCTCTTCTTTACTGTTCTCAGACTCTGTAACCCCATTACAGTGTTTCTTGTCTGAACGAAGCCAATCAAA
ATTTGCTTGGAAGCTTCTTTTGGG
CitationWilm B, James RG, Schultheiss TM, Hogan BL (2004). The forkhead genes, Foxc1 and Foxc2, regulate paraxial versus intermediate mesoderm cell fate. Dev Biol. 2004 Jul 1;271(1):176-89.
CopyrightCopyright © 2004 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_205190).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-36
stage 36
Nephric Ducts
Neural Plate/Tube
 

Entry 5

GEISHA IdRET.Apostolova.2007Data SourcePublication
Complete cDNA Template Probeshow
CTGCCCGGAGCGCCTGTGGCCCAGGAAGATGCGCTCGGTGCGGGGGGCGGCCGGCCTCCTGCTGCTGTGCGGGGCTTCC
TTTGGTCTGTACTTCCCCAGAAAGGAGTACTCAGAGAACGTCTACATTGACCAGCCAGCAGGTGCGCCGCTCCTACGCA
TCCACGCCTTGAGGGATTCACATGGGAAACAGCCCACTTTCATCTGTGCCAGAAGTCTCATCATTTCTCGAGCAAGATC
CCATGAAAATCACTGGTTTCAAATCAGAGAAAAAATGGGACTTCTCTACCTCAGCAAGAGCCTAGATAGAGAAGACTTT
AACATGCTGTCTGTAGGAAACTGGATGCCATTATCAAAGGTGATGCTGTATGTCTTCCTCTCATCTCACCCTTTCCAAG
AGAAGGAATGTGACTCTGCTACTCGTACCACAGTCGTCCTCTCTTTGATCAATGCTACTGCACCAGCTTGCAGTTCACT
GTCAGCAAGGCAGCTTTGCTTCACAGAAATGGATCTCTCCTTTCACATCAAGGAGAATAAACCCCCTGGTACATTTCAT
CAGCTCCAGTTACCCTCAGTTCATCATCTGTGTCAGAATCTCAGCATTACCTACAAACTGTTGGCAGCCGAAGGCCTGC
CTTTTCGGTACAATGAGAACACCACTGGTGTGAGTGTAACACAGCGCCTAGATCGAGAGGAGAGAGAGAGATATGAGCT
GATCGCCAAATGCACCGTGAGAGAAGGCTTCAGGGAAATGGAGGTTGAGGTGCCCTTCCTCGTCAACGTGTTAGATGAA
GATGACTCTCCTCCCTTCCTTCCCAACGGCACTGACACTGCAGATGCTGTCGTGGAGTTCAATAGAAAAGAGGGAACTG
TCCTTGCAACGCTAACTGTGTATGATGCAGACACCACACCTATTTATCCCCTTGAAAGCAGCAGAAAGAAATACACAGG
AACAATAATTACTGACGATCCATGGATAAATGAAACATTTCGGGTGGAGCACATTTTCGATGAAATCCACTTCAGCCCA
AATGGCAGCCAAGAGAGAGGAACTCAACACGAATACAAACTGGTACTGAATAAAAGTATTTCAGTCACAGAGCATCGTT
CCTTCCAGTTGGATGTTTTGGTGAACGACACAGAATTTAATGGCCCAGAAAAATCAGTGATGCTTCATTTCAATGTCTC
CATCCTTCCTGTCAGCATTCAGTTTCCAAACACAACTTATCGATTCACAGTAAACAGAAATGCTCAACGTTTTGCACAA
ATAGGAAAAATCTGCATCGAAAACTGTATGAAGTTCCGTGGTGTGAACATCACCTACAAGTTACTGTCCCCCAATGTGA
GCTGCTATGCTGTTGGCATACTTCAAGGCCGAGAAGACAAATATGGAAGCCTTTATGTGAATGATTCCTCTGTGCTACT
TAGACCTGAATGCAAAGAAATACAATACACCGTTCAAGCTACAGACAAGCAGAGCAGGAAACATACCAAAACCCTTTTC
ACTGTTGTATTAGAAGGAACTCTTTTTAAAAAAGAAGAGGACTGCCCTGACTCTTGTGCTATGAGTAAGCACCTTGCTG
AATGTGAAGAGTGTGGTGGCCTGGGAGTGCTAACAGGAAGATGCCAGTGGAGACAGGGGAGTGGAAAAGGAATCACCAC
AAACTATTCCACATGCACCCCAAGTATCAAGAACTTGCTCCAGATGGCCACCTGTGATATCGTGGAGAGCAAAGATCCA
GCTATTTGCCCCCAGGACTGCACAAATGGAAATATTATTGGTGGTCATGGGAAAGGCACTGGAAACCTTGGAATTAAGT
CAGGACATGGGATTTGTTACTGCTTCCCAAGACAGAACTGTTATTGTGAGAAAGATGATATCAAGGAGCAATTTTGTGA
TGAAGTGTGCAAGACTGTGATAGCAGGGGCGGTGCTGTTGTCCTTCATCATCTCTGTGCTGCTTTCTTCCTATTTCATC
CATCGCTACCACAAGAATTCTCCAAAGCCACCTATTGCCTCTGCAGAAATGACATTCCGGCGCCCAGCCCAGTCATATC
CCATCAGTTATTCTTCTACTAATGTCCGTCGACCTTCTTTAGACTCCATGGAGAACCAGGTGTCTGTAGACACCTTTAA
GATACCAGAAGATCCAAAGTGGGAATTCCCTCGGAAGAACCTGGTTCTAGGCAAGACTCTTGGAGAAGGAGAATTTGGG
AAGGTTGTCAAGGCAACAGCTTTCAGACTCAAGGGAAGAGCTGGCTATACTACTGTGGCTGTGAAAATGCTAAAAGAAA
ATGCTTCCCAGAGCGAGCTGCGAGATCTGCTGTCAGAGTTCAACCTTTTGAAACAGGTGAACCATCCTCACGTCATCAA
ACTTTACGGAGCCTGCAGTCAAGATGGCCCGCTCTATTTAATTGTGGAATATGCTAAATATGGCTCCTTGCGCAGTTTT
CTCAGGGAAAGCCGAAAAGTGGGACCAAGCTACGTGGGTAGTGATGGCAACAGAAATTCCAGTTACTTGGATAACCCCG
ATGAGAGAGCCTTAACAATGGGAGATCTGATATCGTTTGCATGGCAGATATCACGAGGGATGCAGTACCTGGCAGAAAT
GAAGCTCGTCCATCGTGACTTAGCAGCCAGGAATGTGCTGGTGGCAGAAGGGCGCAAAATGAAGATTTCTGATTTTGGC
CTATCCCGTGATGTGTATGAAGAAGATTCCTATGTCAAGAGGAGCAAGGGTCGGATACCTGTTAAATGGATGGCCATAG
AATCCCTGTTTGATCATATCTATACAACACAAAGTGATGTGTGGTCGTTTGGAGTTCTGCTCTGGGAGATTGTAACTCT
GGGAGGCAATCCCTACCCAGGTATTGCTCCTGAAAGACTCTTTAACCTCCTAAAAACAGGCTACAGAATGGAGAGACCA
GAAAACTGTAGTGAAGAAATGTACAACCTGATGTTGCGCTGCTGGAAGCAAGAACCAGATAAAAGGCCAACATTTGCTG
AGATCAGCAAGGAACTGGAGAAAATGATGGTGAAGAGTAGGGACTACTTAGATCTTGCGGCTTCCACCCCTTCTGATTC
CTTACTATATGATGATGGGCTCTCAGAAGAGGAGACACCTCTCGTGGACTGTAATAACGCTCCCCTCCCTCGAACCCTT
CCTTCCACATGGATTGAAAACAAACTCTATGGTAGAATTTCACATGCATTTACTAGATTCTAGCAACACACACACACAC
ACACAGTTTTCTCTTCTTTACTGTTCTCAGACTCTGTAACCCCATTACAGTGTTTCTTGTCTGAACGAAGCCAATCAAA
ATTTGCTTGGAAGCTTCTTTTGGG
CitationApostolova G, Dorn R, Ka S, Hallböök F, Lundeberg J, Liser K, Hakim V, Brodski C, Michaelidis TM, Dechant G. Neurotransmitter phenotype-specific expression changes in developing sympathetic neurons. Mol Cell Neurosci. 2007 Jul;35(3):397-408. Epub 2007 Apr 1.
CopyrightCopyright © 2007 Elsevier Inc. All rights reserved.
Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_205190.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-44
stage 44
stage 44
Spinal Ganglia and Nerves
 

Entry 6

GEISHA IdRET.Olivera-Martinez.2014Data SourcePublication
Complete cDNA Template Probeshow
GTCCTAACTGGATGGTTTCACACTCAGCGGCAAAATTTGTGGACAAGTTTGATAGCTAAAATTTTCTTTGTGAAAGGTA
ATGGACTCACGAGGGGAACAAACATGCAAAGAATGGAAAGTCCATTGGCTCGTTCTTTGTACAGTCAACGACCTTTAGA
TTGGCAAACTCTTTTATTGGTAGTTTTTAAAGTGTGTTATTCATGCTGAAATTGGTGATTTCCCCTTTCAGAAAGCATA
TCAAGCTGGATAAGAGTTGTAGTTCCAGTACTTCTTTTTAGATTGCCACTGTGCATAGGGTTCCATTTGCCAACTTCTT
GCTGCAAATGGCTCTGCACTTCATTCTCGTGGTTTTTCAGATTAACCATCCTGTATTACGACCTTATCGGATGGGAAAA
TGTACTTGAACTGCTACTTTTATAGTGACTGTTTGCATACGACCGCTTGATCTAAGTAGGAAGCACAAACAGATGGAAG
GGAGGGGGGAAACGCGCTCCCAAGCTACTGATCTTGCTGTCAGGTGAGAAGGGTTACAATGATGTTGGCACTAATGAAG
CCTGTATCTTGGTTTAGAAGCAAACATTAAGTAACTCAATAGAGCACTTGAGATTCAACATTTGAAGTCTTGTAAAATG
TATTGTCTTGTCTTAATGAGAAGAGAGTTTGTTTTATTAGTCTTAATTGCTCTTACCTTTAGCACAATGGAGAGAAATT
TAATACAAGATATGCTGTATAGGCCGATGGCAATCAAGAGTGTTCATCTGACACGATTTATTTTCCATCATATACATCT
TACTAATGTTAAAACGTATGACCTTGTACGATCACAGTTCCTTTTACGAGTTCAATTTGGACTGTATGGGAATTTTTAG
TCTGAATTAAAGCGAAGAGATTTTGTTTGCGCC
CitationIsabel Olivera-Martinez, Nick Schurch, Roman A Li, Junfang Song, Pamela A Halley, Raman M Das, Dave W Burt, Geoffrey J Barton, Kate G Storey. Major transcriptome re-organisation and abrupt changes in signalling, cell cycle and chromatin regulation at neural differentiation in vivo. Development 2014 Aug;141(16):3266-76. Epub 2014 Jul 25. DOI: 10.1242/dev.112623.
CopyrightCopyright © 2014. Published by The Company of Biologists Ltd.
CommentsAuthors indicated the probe was made from cDNA clone ChEST924e6. As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (accession number CR406864.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
Neural Plate/Tube
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.654

Mouse

EmageMGI:97902
EurexpressMGI:97902
MGI GXDMGI:97902

Frog

Xenbase485175

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-980526-307
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