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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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RHOU
ras homolog family member U

Gene

Official Symbol	RHOU
Official Full Name	ras homolog family member U
CGNC ID	8408
also known as	rho-related GTP-binding protein RhoU\|ras homolog gene family, member U
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_426146
Polypeptide	XP_426146
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	58480	ENSG00000116574		MIM:606366
Mouse	69581	ENSMUSG00000039960	All phenotypic alleles (2):Targeted, other(2)	MGI:1916831
Xenopus	548469, 493579	ENSXETG00000014956		491189
Zebrafish	492802	ENSDARG00000019709	ZDB-GENE-040618-3	ZFIN:ZDB-GENE-040618-3

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	428589
Ensembl Gene	ENSGALG00000025738
KEGG	gga:428589

Entry 1

GEISHA Id	RHOU.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	CAAGGAGGTCTTTGATGCG
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGAAATGAGATGTCAGTGCCG	cDNA Template Length	761
Forward cDNA Template Probe	show CTAGGTACAGGGTTCCCTCACAGCATGCTGAAGGTATATATGGTGGACCTTTCCAACCATAGCATTTGCGGTATAGATT ACACCCTCTTGCATACCCTTTTTNAAGCGATCCCTAAGACTGTTGGTTTGGGAAGACATGGAGAAGAGAGCAGGAGTGG GTTTTTTAAAGCTAGAAAGGTCCGTTAGGAGGCACAGTGTTATCTTCCCTTTAACTGTCCGTGTACACAGCTCTACATT TCCACAGTCCTCCTGTGCAGCCCTTGCGGCGAAAGGCTCCCATCTGTTCCTCCCCGTCAGGTACACAGGGTAAGACAAG AAGTCGAATCCTTTGGAAAAATCCTTGTAACTTCACAGACAAGTGGTGCGCTTCTTCCCCAATGAAAGACTTTAGTCAC GAAACTCAACGCCAGACCCAATTTACAGCCATGATTTAACTACAAATCCTTCTGCCACCCTCGTGAGGGCAACGGAGAT ACCAAGTAGCAACATATACACATACATACAGATCTAAGCTATACACCCNGGACAACACAGAATGAGATTTCAGCTAATA TAGCCTCTATTTGATTTCCTCAGAGCAGCACTCGGGCCCTCGCAACTCCTATACAAAACAGCAGTATTTTTTCCACCAG GATTTGGAGAGGTTTTTCATCTTGTCTGGAGTCCTACACTTGGATTTCTTTGGTTGCTGCTGGGTATCTGAGTACTGAA TTCCAGCCACAATGGCCGCATCAAGANCCTCCTTGGAA

Stage

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4-6

stage 4

Early Mesoderm
Epiblast
Germinal Crescent
Primitive Streak

7-12

stage 7

stage 8

stage 9

stage 10

Anterior Intestinal Portal
Area Opaca
Blood Vessels
Epiblast
Extraembryonic Mesoderm
Head Mesenchyme
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Somites

13-18

stage 13

stage 14

stage 16

Anterior Intestinal Portal
Area Opaca
Blood Vessels
Extraembryonic Mesoderm
Eye
Intermediate Mesoderm
Lateral Plate Mesoderm
Lung
Paraxial Mesoderm
Somites

19-24

stage 22

stage 23

Allantois
Duodenum
Esophagus
Eye
Foregut
Gut
Leg Mesenchyme
Mesonephros
Outflow Tract
Pharyngeal Arches and Clefts
Pharynx
Pineal Gland
Somatic Mesoderm
Somites
Spinal Cord
Spinal Ganglia and Nerves
Trunk Mesenchyme
Wing Mesenchyme

25-26

stage 26

Eye
Leg Mesenchyme
Pharyngeal Arches and Clefts
Pineal Gland
Somatic Mesoderm
Somites
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme

Entry 2

GEISHA Id	RHOU.Notarnicola.2008	Data Source	Publication
Complete cDNA Template Probe	show GCTCCTCCAGTCAAATGGATGAGTTTGACAAGCTGAGGCCTCTGTGCTACACCAACACAGACATCTTCCTGCTGTGCTT CAGCGTCGTCAGCCCCTCGTCCTTCCAGAACGTCAGCGAGAAGTGGGTCCCCGAAATCCGATGCCACTGCCCCAAGGCG CCCATCATCCTGGTGGGGACGCAGTCGGACCTCCGGGAGGACGTCAAGGTGCTCATCGAGCTGGACAAGTGCAAGGAGA AGCCGGTCCCGGAGGAGGCCGCAAAGCTCTGTGCTGAAGAAATAAAAGCCGCGTCCTACATCGAGTGCTCGGCTTTGAC TCAGAAAAACCTCAAGGAGGTCTTTGATGCGGCCATTGTGGCTGGAATTCAGTACTCAGATACCCAGCAGCAACCAAAG AAATCCAAGTGTAGGACTCCAGACAAGATGAAAAACCTCTCCAAATCCTGGTGGAAAAAATACTGCTGTTTTGTATAGG AGTTGCGAGGGCCCGAGTGCTGCTCTGAGGAAATCAAATAGAGGCTATATTAGCTGAAATCTCATTCTGTGTTGTCCTG GGTGTATAGCTTAGATCTGTATGTATGTGTATATGTTGCTACTTGGTATCTCCGTTGCCCTCACGAGGGTGGCAGAAGG ATTTGTAGTTAAATCATGGCTGTAAATTGGGTCTGGCGTTGAGTTTCGTGACTAAAGTCTTTCATTGGGGAAGAAGCGC ACCACTTGTCTGTGAAGTTACAAGGATTTTTCCAAAGGATTCGACTTCTTGTCTTACCCTGTGTACCTGACGGGGAGGA ACAGATGGGAGCCTTTCGCCGCAAGGGCTGCACAGGAGGACTGTGGAAATGTAGAGCTGTGTACACGGACAGTTAAAGG GAAGATAACACTGTGCCTCCTAACGGACCTTTCTAGCTTTAAAAAACCCACTCCTGCTCTCTTCTCCATGTCTTCCCAA ACCAACAGTCTTAGGGATCGCTTTAAAAAGGGTATGCAAGAGGTGTAATCTATACGCAAATGCTATGGTTGGAAAGGTC ACATATATACCTTCAGCATGCTGTGAGGGAACCTGATACGTTACGGCACTGACATCTCATTTGTCACCTCCCGACTTGA GGGTCATTTCTGTCCTTTTCCCCTCCTGCCCAGGGTGTCGCAAGGAAGCCCGAGGAGTGTTACTGAGCCTTAGCTCACC GCTTTGGGTGGCAGTGGGTTTCTCTCTCTTTGTGTGGATGTGACGGCAGTTGGTCTGTTTCAGCAGAAAAGAATGTAAA TGCTGTTGGGTTTGTTGGTTTTTTTTTATCTTTTTTTTTCTTTCTTTTTTTTTTTAAGAGATGTAACAAATATCTGTGC AGCACCGTGCAAACTGCATCTGTTTTTAAGTCTATAGCCAAGAGTCAGAATGCCCCTCCTTACCTTTCAGGCTGCTAAA CAAACAACAAAGCAGGCAGATCAAGGTGATAACAGACTGGACTCCAGCAACTGAGGCTGCTGTGTCTTCTATCAGGCTG TTTTCAACCAAGTTAATGTTTCCCTCCTAAAAGCAACAGTTGCTTATGGTTGAATCTTGTCCAAACTCATGCAGGGGAA ATGGGCTGAGGCCACTCTGAAAATGCAACTGACGGCGTTTTCCCAGATCAGTCCAACAGGTTAAACGTGCCTAAAATGT AGCTGAGTGATCAAGGTAGTGCAGGGCTGCGTGTGACCCAGCCTCTGACTAAATCCTACGGGGCTAAGCCTAAGTTCAG TCCCTGTGGGTTTGAGAGACTGGAAGAGTAACGTGACTCTCTGCAAGAATGGTATTTTAACTTCTTCTGCAGAGGGCAT TTAGTCTGCACTGTCTGTCTGTCTTTTTATGGCCCCGACTACTGTTTTTTTTCTTTCCTAGGTATTTCAAGATCAGATT CTTTTCTTTTTCTTTTTTTCTTTTTTTTCCCTTTGGCCATAGCCTTAAAGTGACCTTTTTCATAGTCTTAAACTAAACT GCAGTTGCAGAAAGCCAGAACCCTTTTTCATCATAAATGAATCAATGCCTGATA
Citation	Notarnicola C, Le Guen L, Fort P, Faure S, de Santa Barbara P. Dynamic expression patterns of RhoV/Chp and RhoU/Wrch during chicken embryonic development. Dev Dyn. 2008 Apr;237(4):1165-71
Copyright	Copyright © 2008 Wiley-Liss, Inc.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI XM_426146.4

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