GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

PTPRZ1
protein tyrosine phosphatase, receptor type Z1

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolPTPRZ1
Official Full Nameprotein tyrosine phosphatase, receptor type Z1
CGNC ID6807
also known asreceptor-type tyrosine-protein phosphatase zeta|phosphotyrosyl phosphatase|protein tyrosine phosphatase, receptor-type, Z polypeptide 1, Phosphotyrosyl phosphatase
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001199312
PolypeptideNP_001186241
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.2977
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human5803ENSG00000106278MIM:600263MIM:176891
Mouse19283ENSMUSG00000068748All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:97816
Xenopus100125091, 3993521011830
Zebrafish553019ZDB-GENE-090406-1, ZDB-GENE-050506-100ZFIN:ZDB-GENE-090406-1, ZFIN:ZDB-GENE-050506-100
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene396403
Ensembl Gene
KEGGgga:396403

Entry 1

GEISHA IdRPTPZ/B.Ivanova.2004Data SourcePublication
Complete cDNA Template Probeshow
CCGCGCGCACACGCACCCACCCCGCCGCGCGCTCGCCGCACGCACTCGCGGCCGCTCCGCGGAGGGCGGCCCCGGCGCA
GCCCCGCCATGCGCTGAGCGCGGCCCCGGCAGCAGCCAGCACCCCGCACCCGGCGCCCGGCTCTCCGCACCCCGCACCC
GACTCTCGCTGGGCCCGCCCGCGGCGTGGGGGCGGCCGCGGGGCGCGGCGCGGAGCCGTTCCCCACGAGAGGTGCAGCT
CCGCGCGGGCGGCGGCTGAGGCAGACGGACGGAGCGGCGGGCGGGAGGAGGAACGGGACGATTTGGACATGCTCATTCT
AGGGCGCTGGGTTGCCTGCATCCAGCTCGTCTGTATCCTCCGAGCGGATTTGGTATACGGATACTACAGACAGCAGCGG
AAGTTGACCGAAGAGGTTGATTGGTCATATACAGGAACTTTGAACCAAACGGACTGGGGAAAAAAATATTCAGCTTGCA
ATGGTGCCAAACAATCTCCTATTAATATAGATGAAGAACTTACCCAAGTGAATGTGAATCTAAAGAAACTTAAATTCCA
TGGATGGGAAAAGGAAACTGGAGAAGGTACTTTCATTCGCAACAATGGCAAAACAGTGGAGATTAACCTGTCAAATGAT
TACTATGTAAGTGGAGGTGGCTTAGATACTGTATTCAAAGCAAGCAAGATCACTTTTCACTGGGGAAAATGCAATGCGT
CATCGGATGGATCAGAACATAGCTTGGAAGGACAAAAATTTCCTCTTGAGATGCAAATCTACTGCTATGATGGAGATCT
GTTTACAGACTTCAAAGAGGCAATTAAAGGAAATGGAAAGTTAAGAGCTTTATCAGTTTTGTTTGAGATTGGAGTAGAA
GATAATCCGGATTATATTCCAATCATTAAGGGAGTAGATAGTGTTAGTCGTTTTGGAAAACAAGCTGCCTTAGAACCAT
TTGTTTTGCTGAACCTTTTACCGAATGCAACGGACAAATATTACACTTACAATGGGTCTTTATCAGCTCCTCCCTGCTC
AGAAACAGTTGAATGGATTGTGTTCAAAGATACTATTAGTATTTCTGAGCAACAGTTAGCAGTATTCTGTGAAGTCCTT
ACAATGCAACAGTCTGGCTATGTGATGCTCATGGACTATCTGCAAAACAACTTTCGAGAGCAACGATATAAGTTCTCTG
GGCAAGTGTTTTCCTCTTACACTGGACAGGAAGAAATTCATGAAGCAGTTTGCAGCTCAGAACCTGAAAATGTCCAATC
TGATCCAAAGAATTATACCAGCCTTCTGGTTACGTGGGAAAGACCTCGGGTTGTGTATGATACCATGATTGAGAAGTTT
GCTGTCTTTTATCAACAGTTGGATGGAGAAGACCAGACTAAGCATGAGTTTCTGACAGATGGGTATCAGGACTTGGGAG
CTATTCTAAATAATCTGCTGCCCAATACAAGTTATGTTCTTCAGATAGTTGCTGTTTGCTCTAATGGTCTGCACGGAAA
ATACAGTGACCAAGTCATTGTTGATATGCCTTTAGAGGACCAAGAGACTGACCTCATTCCTGAACTGAATGAAACTGAA
GATTATGAGGATGAAGCTGATGAAAAAGAAACAGAGGTGGATGAGGAAACTGCAGTGATTCCTAGCACTGACAGTGCAA
TAAAACAAATAAAGAGGAAAGATTTCCAGATGACTACATCAAGCTACAGCCAAGAAAACATGGGGACAAAACCTAATGA
AGCTAAAATAAATAGATACTTAACAAGAGAAGAATTGCCTGGTAAGGATGAGGTTTTCAAAGCAGTTTATTATCCTACT
TCTCCACCTGTCAGTGAAACCTCTGAAGAAGAAGATGCTTTTTTGGAATCCCAAACGATTACTGAAATTCCTGCTCAAT
TCACTGACTCCACCAAAGGCATAGAAGAAGAATACATATACCTTTCTTCAGGCACTGAACCAACCAGGATAACTACTAC
AGGCCATAGTGGTGAAGATTTCTTATTGTCTCCTTTTAAACCTGATCAGGAATCTGATGACTTTTGGAGTTCAGTTCTC
ACCACTTCTTCAGCACATCTGGTTACAGAGGAGACCTCCCAAGAAGACATCCTTCCTTCCGGAAGCCCAGATATAAGCA
TGCAGGATGTCCTTTACCAAGGCTCTGTTACACATGTTTCAGAAGGTGCAGCACCCCCAAGCTCTGATAAGCCTCCAAA
GCATACATCTTCCACTGATGGAAATTTGTGGTTTCGGAATGCTACGGAGCTGACAAGTCAGCCTGTTGGTACAATGGAT
AGCAGTCATTTGTCTCAGACCAGTTACACTGAGGATTACGTAGAGGGATTAAAGCCAGCTACAGTGCCCTATTCCGGCA
GCCCAGTGGTTTCACAAGACACGTCAGATGTGGATTTAGAATTGCCACATTATTCTACCTTTGCTTTCTCCTCTGCTGA
ATTACCACCTCACTCTCTCTCTTCAAGCTCTGGAGAATATGGTTCTGCTTCTGCTGCCAGTGAGGTACTCTCTCAGACA
ACTCAACCAATCTATAATGAGGCAAGTAATAGTAGCCATGAGTCTCGTATCGGTCTAGCTGAGAGTCTGGAATCAGAGA
AGAAGACAGTTATACCACTTGTGGTCGTATCCGCCCTGACTTTTATCTGTCTAGTGATTCTTGTGGGTATTCTCATATA
CTGGAGGAAATGTTTCCAGACTGCTCACTTTTATTTAGAAGATAACACGTCACCTCGAGTGATTTCTGCTCCCCCGGCT
CCAGTCTTCCCAGTCTCAGATGATGTTGGAGCAATTCCAATAAAGCATTTTCCAAAACATGTTGCAGATTTACATGCAA
GTAATGGTTTTTCTGAAGAATTTGAGGAAATCCAGAGCTGTACTGTAGATCTAGGTATTACGTCAGACAGCTCTAATCA
CCCTGACAACAAGAATAAGAATCGATACATAAACATTGTTGCTTATGATCATACCAGGGTCAAACTAGCACAGCTTGCA
GAAAAGGATGGAAAACTGACTGATTACATTAATGCCAACTATGTTGATGGCTACAACAAGCCAAAAGCCTACATTGCAG
CTCAAGGGCCACTAAAATCAACAGCAGAAGATTTCTGGAGAATGATATGGGAACATAACGTAGAAGTTATTGTGATGAT
AACTAATCTCCTTGAGAAAGGAAGGAGAAAGTGCGACCAGTACTGGCCTGCTGAAGGTAGTGAAGAATATGGGAACTTC
TTGGTTACTCAGAAGAGTGTCCACGTACTTGCTTATTACACTGTGAGGAATTTTACTCTTAGAAACACAAAGATCAAAA
AGGGTTCCCAGAAAGGGAGGTCTAGTGGACGTGTAGTAACTCAGTACCATTATACCCAGTGGCCTGACATGGGTGTTCC
AGAGTACACGCTGCCCGTGCTCACCTTCGTGCGGAAGGCATCGCACGCCAAGCGCCATGCTGTCGGGCCGATTGTGGTT
CATTGCAGCGCTGGTGTTGGAAGGACAGGCACTTACGTAGTGTTAGACAGCATGCTGCAGCAAATTCAGCATGAGGGGA
CAGTCAACATATTTGGATTCTTAAAACACATACGTACCCAAAGGAACTATTTGGTGCAGACTGAGGAGCAATACATCTT
CATTCATGATGCACTGGTTGAAGCAATTCTCAGTAAAGAAACAGAAGTCCTTGAGACTCATATTCATGCCTATGTTAAT
GCCCTCTTGATACCTGGACCAACAGGAAAAACCCGGCTGGAGAAGCAATTCAAGTTACTGAGCCAGTCTAACACACAGC
AGTGCGATTACTCAACTGCACTCAAACAGTGTAACAGGGAAAAGAATCGAACTTCATCCATCATTCCTGTGGAAAGATC
TAGAGTGGGTATCTCATCACTGTCTGGTGAAGGCACAGACTACATCAATGCTTCCTATATTATGGGTTATTATCAAAGT
AATGAATTCATTATTACCCAGCATCCCTTACTGCACACTATCAAGGATTTCTGGAGAATGATATGGGACCATAATGCCC
AGCTAATAGTCATGCTCCCTGATAGCCAGAATATGGCTGAAGATGAATTTGTGTACTGGCCAAACAAAGACGAGCCTAT
AAACTGTGAGACTTTCAAAGTTACTATGATTGCTGAAGAACACAAGTGTCTGTCTAATGAGGAAAAGCTCATAATCCAA
GACTTTATTTTAGAAGCTACACAGGATGACTATGTACTCGAAGTGAGGCATTTTCAGTGTCCAAAATGGCCAAATCCTG
ATAGTCCTATTAGCAAAACCTTTGAACTGATCAGCATCATCAAAGAGGAGACGTCCAACCGTGACGGACCCATGATTGT
ACATGATGAGCACGGAGGGGTGACAGCAGGCACTTTCTGTGCTCTGACAACACTCATGCATCAGCTGGAAAATGAGAAC
TCGGTGGATGTTTACCAGGTAGCAAAGATGATAAATTTGATGAGGCCCGGAGTCTTTACAGACATCGAACAGTACCAGT
TTCTGTACAAAGCGATTCTCAGCCTTGTCAGCACAAGGCAAGAAGAAAACCCTTCAGCATCTATGGACAGTAATGGCTC
AGCTTTACCAGATGGAAACGCAGCTGAAAGTTTAGAATCTTTAGTTTAAGTAACGAAGCAAATGGAACACACAAACACT
TGCACCACATCGGTCACATCTGGAGTTTACCATTATTCTTTTCAGTTTTATACTCAGTGGGGGGAAATCTGTCACTCTA
TATATAATCAGTCCCCAACCTTTGTTCCAGCAAAGTCATTTCTGTGACATATGACTTTACTGAGGAACTTTTATCATTA
ACAATGTGTGCCTTTTCTTGAACGATTTCTTGTAATACGTTGTTCTGTCTGGACTAACTTGATTGGCTTTTACAGTGTT
TCTAAGAATTGAATTGTGGTACGTTTTTTCAGTATTAGTTTTTGATTTATCTGGCTTTACTTTAACTTAAAATTATCAT
ATTTATAGGTGTTAGGGGATTCTCAATTACAAACAAACGTCATGGTTTTAGTATTTGATTTATTTGCTGTATTTATAAC
AATCTACATTTGCTAGAAATATAACTTTTAATATAGTAGAATGTAAATAAAATACTGTTCTCCATAACATTCCGCATTT
TAAGACTTCAATTAGACACTTAGCATAGTAATCTGATACTTACTGTAAATACTGCTACTTCTATAGTGATTCCATGGAC
CAAATTTATATTTATAATTGTAGATTTTTATATTTTACTACAGAGTCAGTTTTCTAGTTCTGTGTAATTGCCTTGTTAA
AATGATGTAGTCCAGTATGTTTTTATTTTAACAAAGTCTTCTGATATATAACTGTGCATATTAAGCAATTAACCTTCAT
ATAGCTGCATGTGATTTTAACCTTTTGTGAGGAATAGAAATCATTTGTTTTGAAATGAGAAGTTTTTATGAGAATAACA
CCAGTACTTGGCATTGTTAAATTGTTTTTACCTATGGCATTGCAAAAATAAATATAAATATTCCATTC
CitationIvanova A, Agochiya M, Amoyel M, Richardson WD. Receptor tyrosine phosphatase zeta/beta in astrocyte progenitors in the developing chick spinal cord. Gene Expr Patterns. 2004 Mar;4(2):161-6.
CopyrightCopyright © 2003 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_001231942).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
Spinal Cord
 
25-30
stage 26
stage 28
Spinal Cord
 
31-40
stage 32
stage 35
stage 36
stage 37
stage 40
Spinal Cord

Entry 2

GEISHA IdRTPZETA.Chambers.2006Data SourcePublication
Complete cDNA Template Probeshow
CCGCGCGCACACGCACCCACCCCGCCGCGCGCTCGCCGCACGCACTCGCGGCCGCTCCGCGGAGGGCGGCCCCGGCGCA
GCCCCGCCATGCGCTGAGCGCGGCCCCGGCAGCAGCCAGCACCCCGCACCCGGCGCCCGGCTCTCCGCACCCCGCACCC
GACTCTCGCTGGGCCCGCCCGCGGCGTGGGGGCGGCCGCGGGGCGCGGCGCGGAGCCGTTCCCCACGAGAGGTGCAGCT
CCGCGCGGGCGGCGGCTGAGGCAGACGGACGGAGCGGCGGGCGGGAGGAGGAACGGGACGATTTGGACATGCTCATTCT
AGGGCGCTGGGTTGCCTGCATCCAGCTCGTCTGTATCCTCCGAGCGGATTTGGTATACGGATACTACAGACAGCAGCGG
AAGTTGACCGAAGAGGTTGATTGGTCATATACAGGAACTTTGAACCAAACGGACTGGGGAAAAAAATATTCAGCTTGCA
ATGGTGCCAAACAATCTCCTATTAATATAGATGAAGAACTTACCCAAGTGAATGTGAATCTAAAGAAACTTAAATTCCA
TGGATGGGAAAAGGAAACTGGAGAAGGTACTTTCATTCGCAACAATGGCAAAACAGTGGAGATTAACCTGTCAAATGAT
TACTATGTAAGTGGAGGTGGCTTAGATACTGTATTCAAAGCAAGCAAGATCACTTTTCACTGGGGAAAATGCAATGCGT
CATCGGATGGATCAGAACATAGCTTGGAAGGACAAAAATTTCCTCTTGAGATGCAAATCTACTGCTATGATGGAGATCT
GTTTACAGACTTCAAAGAGGCAATTAAAGGAAATGGAAAGTTAAGAGCTTTATCAGTTTTGTTTGAGATTGGAGTAGAA
GATAATCCGGATTATATTCCAATCATTAAGGGAGTAGATAGTGTTAGTCGTTTTGGAAAACAAGCTGCCTTAGAACCAT
TTGTTTTGCTGAACCTTTTACCGAATGCAACGGACAAATATTACACTTACAATGGGTCTTTATCAGCTCCTCCCTGCTC
AGAAACAGTTGAATGGATTGTGTTCAAAGATACTATTAGTATTTCTGAGCAACAGTTAGCAGTATTCTGTGAAGTCCTT
ACAATGCAACAGTCTGGCTATGTGATGCTCATGGACTATCTGCAAAACAACTTTCGAGAGCAACGATATAAGTTCTCTG
GGCAAGTGTTTTCCTCTTACACTGGACAGGAAGAAATTCATGAAGCAGTTTGCAGCTCAGAACCTGAAAATGTCCAATC
TGATCCAAAGAATTATACCAGCCTTCTGGTTACGTGGGAAAGACCTCGGGTTGTGTATGATACCATGATTGAGAAGTTT
GCTGTCTTTTATCAACAGTTGGATGGAGAAGACCAGACTAAGCATGAGTTTCTGACAGATGGGTATCAGGACTTGGGAG
CTATTCTAAATAATCTGCTGCCCAATACAAGTTATGTTCTTCAGATAGTTGCTGTTTGCTCTAATGGTCTGCACGGAAA
ATACAGTGACCAAGTCATTGTTGATATGCCTTTAGAGGACCAAGAGACTGACCTCATTCCTGAACTGAATGAAACTGAA
GATTATGAGGATGAAGCTGATGAAAAAGAAACAGAGGTGGATGAGGAAACTGCAGTGATTCCTAGCACTGACAGTGCAA
TAAAACAAATAAAGAGGAAAGATTTCCAGATGACTACATCAAGCTACAGCCAAGAAAACATGGGGACAAAACCTAATGA
AGCTAAAATAAATAGATACTTAACAAGAGAAGAATTGCCTGGTAAGGATGAGGTTTTCAAAGCAGTTTATTATCCTACT
TCTCCACCTGTCAGTGAAACCTCTGAAGAAGAAGATGCTTTTTTGGAATCCCAAACGATTACTGAAATTCCTGCTCAAT
TCACTGACTCCACCAAAGGCATAGAAGAAGAATACATATACCTTTCTTCAGGCACTGAACCAACCAGGATAACTACTAC
AGGCCATAGTGGTGAAGATTTCTTATTGTCTCCTTTTAAACCTGATCAGGAATCTGATGACTTTTGGAGTTCAGTTCTC
ACCACTTCTTCAGCACATCTGGTTACAGAGGAGACCTCCCAAGAAGACATCCTTCCTTCCGGAAGCCCAGATATAAGCA
TGCAGGATGTCCTTTACCAAGGCTCTGTTACACATGTTTCAGAAGGTGCAGCACCCCCAAGCTCTGATAAGCCTCCAAA
GCATACATCTTCCACTGATGGAAATTTGTGGTTTCGGAATGCTACGGAGCTGACAAGTCAGCCTGTTGGTACAATGGAT
AGCAGTCATTTGTCTCAGACCAGTTACACTGAGGATTACGTAGAGGGATTAAAGCCAGCTACAGTGCCCTATTCCGGCA
GCCCAGTGGTTTCACAAGACACGTCAGATGTGGATTTAGAATTGCCACATTATTCTACCTTTGCTTTCTCCTCTGCTGA
ATTACCACCTCACTCTCTCTCTTCAAGCTCTGGAGAATATGGTTCTGCTTCTGCTGCCAGTGAGGTACTCTCTCAGACA
ACTCAACCAATCTATAATGAGGCAAGTAATAGTAGCCATGAGTCTCGTATCGGTCTAGCTGAGAGTCTGGAATCAGAGA
AGAAGACAGTTATACCACTTGTGGTCGTATCCGCCCTGACTTTTATCTGTCTAGTGATTCTTGTGGGTATTCTCATATA
CTGGAGGAAATGTTTCCAGACTGCTCACTTTTATTTAGAAGATAACACGTCACCTCGAGTGATTTCTGCTCCCCCGGCT
CCAGTCTTCCCAGTCTCAGATGATGTTGGAGCAATTCCAATAAAGCATTTTCCAAAACATGTTGCAGATTTACATGCAA
GTAATGGTTTTTCTGAAGAATTTGAGGAAATCCAGAGCTGTACTGTAGATCTAGGTATTACGTCAGACAGCTCTAATCA
CCCTGACAACAAGAATAAGAATCGATACATAAACATTGTTGCTTATGATCATACCAGGGTCAAACTAGCACAGCTTGCA
GAAAAGGATGGAAAACTGACTGATTACATTAATGCCAACTATGTTGATGGCTACAACAAGCCAAAAGCCTACATTGCAG
CTCAAGGGCCACTAAAATCAACAGCAGAAGATTTCTGGAGAATGATATGGGAACATAACGTAGAAGTTATTGTGATGAT
AACTAATCTCCTTGAGAAAGGAAGGAGAAAGTGCGACCAGTACTGGCCTGCTGAAGGTAGTGAAGAATATGGGAACTTC
TTGGTTACTCAGAAGAGTGTCCACGTACTTGCTTATTACACTGTGAGGAATTTTACTCTTAGAAACACAAAGATCAAAA
AGGGTTCCCAGAAAGGGAGGTCTAGTGGACGTGTAGTAACTCAGTACCATTATACCCAGTGGCCTGACATGGGTGTTCC
AGAGTACACGCTGCCCGTGCTCACCTTCGTGCGGAAGGCATCGCACGCCAAGCGCCATGCTGTCGGGCCGATTGTGGTT
CATTGCAGCGCTGGTGTTGGAAGGACAGGCACTTACGTAGTGTTAGACAGCATGCTGCAGCAAATTCAGCATGAGGGGA
CAGTCAACATATTTGGATTCTTAAAACACATACGTACCCAAAGGAACTATTTGGTGCAGACTGAGGAGCAATACATCTT
CATTCATGATGCACTGGTTGAAGCAATTCTCAGTAAAGAAACAGAAGTCCTTGAGACTCATATTCATGCCTATGTTAAT
GCCCTCTTGATACCTGGACCAACAGGAAAAACCCGGCTGGAGAAGCAATTCAAGTTACTGAGCCAGTCTAACACACAGC
AGTGCGATTACTCAACTGCACTCAAACAGTGTAACAGGGAAAAGAATCGAACTTCATCCATCATTCCTGTGGAAAGATC
TAGAGTGGGTATCTCATCACTGTCTGGTGAAGGCACAGACTACATCAATGCTTCCTATATTATGGGTTATTATCAAAGT
AATGAATTCATTATTACCCAGCATCCCTTACTGCACACTATCAAGGATTTCTGGAGAATGATATGGGACCATAATGCCC
AGCTAATAGTCATGCTCCCTGATAGCCAGAATATGGCTGAAGATGAATTTGTGTACTGGCCAAACAAAGACGAGCCTAT
AAACTGTGAGACTTTCAAAGTTACTATGATTGCTGAAGAACACAAGTGTCTGTCTAATGAGGAAAAGCTCATAATCCAA
GACTTTATTTTAGAAGCTACACAGGATGACTATGTACTCGAAGTGAGGCATTTTCAGTGTCCAAAATGGCCAAATCCTG
ATAGTCCTATTAGCAAAACCTTTGAACTGATCAGCATCATCAAAGAGGAGACGTCCAACCGTGACGGACCCATGATTGT
ACATGATGAGCACGGAGGGGTGACAGCAGGCACTTTCTGTGCTCTGACAACACTCATGCATCAGCTGGAAAATGAGAAC
TCGGTGGATGTTTACCAGGTAGCAAAGATGATAAATTTGATGAGGCCCGGAGTCTTTACAGACATCGAACAGTACCAGT
TTCTGTACAAAGCGATTCTCAGCCTTGTCAGCACAAGGCAAGAAGAAAACCCTTCAGCATCTATGGACAGTAATGGCTC
AGCTTTACCAGATGGAAACGCAGCTGAAAGTTTAGAATCTTTAGTTTAAGTAACGAAGCAAATGGAACACACAAACACT
TGCACCACATCGGTCACATCTGGAGTTTACCATTATTCTTTTCAGTTTTATACTCAGTGGGGGGAAATCTGTCACTCTA
TATATAATCAGTCCCCAACCTTTGTTCCAGCAAAGTCATTTCTGTGACATATGACTTTACTGAGGAACTTTTATCATTA
ACAATGTGTGCCTTTTCTTGAACGATTTCTTGTAATACGTTGTTCTGTCTGGACTAACTTGATTGGCTTTTACAGTGTT
TCTAAGAATTGAATTGTGGTACGTTTTTTCAGTATTAGTTTTTGATTTATCTGGCTTTACTTTAACTTAAAATTATCAT
ATTTATAGGTGTTAGGGGATTCTCAATTACAAACAAACGTCATGGTTTTAGTATTTGATTTATTTGCTGTATTTATAAC
AATCTACATTTGCTAGAAATATAACTTTTAATATAGTAGAATGTAAATAAAATACTGTTCTCCATAACATTCCGCATTT
TAAGACTTCAATTAGACACTTAGCATAGTAATCTGATACTTACTGTAAATACTGCTACTTCTATAGTGATTCCATGGAC
CAAATTTATATTTATAATTGTAGATTTTTATATTTTACTACAGAGTCAGTTTTCTAGTTCTGTGTAATTGCCTTGTTAA
AATGATGTAGTCCAGTATGTTTTTATTTTAACAAAGTCTTCTGATATATAACTGTGCATATTAAGCAATTAACCTTCAT
ATAGCTGCATGTGATTTTAACCTTTTGTGAGGAATAGAAATCATTTGTTTTGAAATGAGAAGTTTTTATGAGAATAACA
CCAGTACTTGGCATTGTTAAATTGTTTTTACCTATGGCATTGCAAAAATAAATATAAATATTCCATTC
CitationChambers, D, Mason, I, A high throughput messenger RNA differential display screen identifies discrete domains of gene expression and novel patterning processes along the developing neural tube. BMC Dev Biol. 2006; 6: 9. Published online 2006 February 24.
CopyrightCopyright © 2006 Chambers and Mason; licensee BioMed Central Ltd.This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc #NM_001199312)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
stage 10
Forebrain
 

Entry 3

GEISHA IdRPTPZ.Cui.2019Data SourcePublication
Complete cDNA Template Probeshow
AGCTCGTCTGTATCCTCCGAGCGGATTTGGTATACGGATACTACAGACAGCAGCGGAAGTTGACCGAAGAGGTTGATTG
GTCATATACAGGAACTTTGAACCAAACGGACTGGGGAAAAAAATATTCAGCTTGCAATGGTGCCAAACAATCTCCTATT
AATATAGATGAAGAACTTACCCAAGTGAATGTGAATCTAAAGAAACTTAAATTCCATGGATGGGAAAAGGAAACTGGAG
AAGGTACTTTCATTCGCAACAATGGCAAAACAGTGGAGATTAACCTGTCAAATGATTACTATGTAAGTGGAGGTGGCTT
AGATACTGTATTCAAAGCAAGCAAGATCACTTTTCACTGGGGAAAATGCAATGCGTCATCGGATGGATCAGAACATAGC
TTGGAAGGACAAAAATTTCCTCTTGAGATGCAAATCTACTGCTATGATGGAGATCTGTTTACAGACTTCAAAGAGGCAA
TTAAAGGAAATGGAAAGTTAAGAGCTTTATCAGTTTTGTTTGAGATTGGAGTAGAAGATAATCCGGATTATATTCCAAT
CATTAAGGGAGTAGATAGTGTTAGTCGTTTTGGAAAACAAGCTGCCTTAGAACCATTTGTTTTGCTGAACCTTTTACCG
AATGCAACGGACAAATATTACACTTACAATGGGTCTTTATCAGCTCCTCCCTGCTCAGAAACAGTTGAATGGATTGTGT
TCAAAGATACTATTAGTATTTCTGAGCAACAGTTAGCAGTATTCTGTGAAGTCCTTACAATGCAACAGTCTGGCTATGT
GATGCTCATGGACTATCTGCAAAACAACTTTCGAGAGCAACGATATAAGTTCTCTGGGCAAGTGTTTTCCTCTTACACT
GGACAGGAAGAAATTCATGAAGCAGTTTGCAGCTCAGAACCTGAAAATGTCCAATCTGATCCAAAGAATTATACCAGCC
TTCTGGTTACGTGGGAA
CitationCui R, Lwigale P. Expression of the heparin-binding growth factors Midkine and pleiotrophin during ocular development. Gene Expr Patterns. 2019 Jun;32:28-37. Epub 2019 Feb 27. DOI: 10.1016/j.gep.2019.02.001.
CopyrightCopyright © 2019 Elsevier B.V. 
CommentsThe complete cDNA template sequence was obtained from the information provided in the publication as described in Cui et al. 2019.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-38
stage 31
stage 38
Cranial Ganglia
Eye
Retina
inl, inner nuclear layer
trigeminal ganglion
all
 
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.2977

Mouse

EmageMGI:97816
EurexpressMGI:97816
MGI GXDMGI:97816

Frog

Xenbase1011830

Fruit Fly

BDGP

Zebra Finch

ZEBrAPTPRZ1

Zebrafish

ZFINZDB-GENE-090406-1, ZDB-GENE-050506-100
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona