GEISHA - A Chicken Embryo Gene Expression Database
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ALDH1A1
aldehyde dehydrogenase 1 family member A1

Gene
Official SymbolALDH1A1
Official Full Namealdehyde dehydrogenase 1 family member A1
CGNC ID49236
also known asGGADHR, retinal dehydrogenase 1|ALDH class 1|ALDH-E1|ALHDII|RALDH 1|aldehyde dehydrogenase family 1 member A1|aldehyde dehydrogenase, cytosolic|cytosolic aldehyde dehydrogenase|ralDH1, Retinal dehydrogenase 1 , RalDH1, Aldehyde dehydrogenase, cytosolic, ALHDII, ALDH-E1, Aldehyde dehydrogenase family 1 member A1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204577
PolypeptideNP_989908
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.4119
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly43244FBgn0051075
Human216ENSG00000165092MIM:100640
Mouse11668ENSMUSG00000053279All phenotypic alleles (3):Targeted, knock-out(2) Targeted, other(1) MGI:1353450
Xenopus613078, 397728987057
Zebrafish
Gene Ontology
Molecular Functionretinal dehydrogenase activity
Biological Processretinol metabolic process
Cellular Componentcytoplasm
Links to other databases
Entrez Gene395264
Ensembl GeneENSGALG00000015147
KEGGgga:395264

Entry 1

GEISHA IdRaldh1.Maden.2007Data SourcePublication
Complete cDNA Template Probeshow
CTCTTTTTTTTCCAAGTATATCATCAAGATCACACTCAATTCAATGCCGATTATGTGTTTGCTTGAAGGATCTCTTTCT
CTGAGTAATATTACTTGATAAACACAGAACTGAAGTAAGAATCTAAGTATTCATTTGTTGCTGTTACTGAATCGTGCAT
ATATAGAGGTCATGACTGGTACTCTGACAGTAGTGCTGATCGCAGACCTTAGGGCAGAGTGCGCAGTGGATTTGAAATA
TTACAGACCTAGGAAATCAAGCCCTGATTGTAAAGCTGCTTTCCAGTAAGTGAAGAAGTTCAATTAAAATCTGGGGACC
TGCCTCCTGAGAGAAAGTAATTTTACAGGAGCGTACTCAAACTCCTCACCTGGCAACATGAAGAAGCAAGGCTCACCCA
GCAATCCTGCTCCTGTTTTGCCAGCACTGCCAGAACCACTCAAAGATCTGAAAATTAAGTACACTAAGATATTTATAAA
CAATGAATGGCATGATTCAGTCAGCGGTAAAAAATTTGAAGTCTTTAACCCCGCAAATGAGGAGAAAATCTGTGAGGTT
GCAGAAGGTGACAAGGCAGATATAGACAAGGCTGTGAAAGCAGCTAGAAAAGCTTTTGAGCTCGGATCACCCTGGCGTA
CCATGGATGCTTCAGAACGAGGAAGGCTCTTGAACAAACTAGCTGATTTAGTTGAAAGAGATCGACTGACTTTAGCTAC
AATGGAAGCTATTGATGGTGGTAAACTCTTTTCTACTGCCTACCTAATGGATTTAGGTGCTTGTATTAAAACAATACGC
TACTGTGCAGGCTGGGCTGATAAAATCCATGGTCGAACTGTTCCAATGGATGGAAACTTTTTCACATTTACAAGACATG
AGCCTGTTGGTGTGTGTGGACAAATTATTCCTTGGAACTTCCCATTGGTTATGTTTATCTGGAAGATCGCCCCTGCACT
TTGTTGTGGAAACACAGTGGTTGTCAAACCAGCGGAACAAACACCTCTGAGTGCCCTTTACATGGGATCCTTAATTAAA
GAGGCAGGATTTCCACCTGGAGTTGTGAATATTGTGCCAGGCTTTGGACCCACCGCTGGAGCAGCAATTTCTCACCACA
TGGACATAGACAAAGTGTCCTTCACAGGCTCTACTGAGGTTGGTAAATTGATCAAAGAAGCAGCAGGGAAGACCAATCT
GAAGAGAGTTACACTGGAACTTGGAGGAAAAAGTCCTAACATTATATTTGCAGATGCAGACTTGGATGAAGCTGCGGAA
TTTGCACACATTGGTCTGTTTTACCACCAAGGGCAGTGTTGTATAGCAGGATCCAGAATTTTTGTGGAAGAGCCTATTT
ATGATGAGTTTGTTCGCCGGAGCATTGAACGAGCAAAGAAGTACACTCTTGGGGATCCTCTGTTACCTGGTGTACAGCA
AGGCCCTCAAATTGACAAGGAGCAGTTTCAAAAAATCCTGGATCTCATTGAGAGTGGGAAAAAAGAAGGAGCCAAGCTG
GAATGTGGAGGAGGTCCATGGGGAAACAAGGGTTACTTCATCCAGCCCACGGTTTTTTCTAATGTTACGGATGATATGC
GCATCGCCAAAGAAGAGATATTTGGACCTGTTCAACAAATCATGAAGTTCAAAACTATAGATGAAGTTATCAAGAGGGC
AAATAACACTACCTATGGCTTAGCAGCAGCAGTTTTTACCAAAGACATTGATAAAGCACTGACATTTGCATCTGCTCTT
CAGGCTGGGACAGTGTGGGTTAATTGTTATAGTGCATTTTCAGCTCAGTGTCCTTTTGGAGGATTTAAGATGTCAGGAA
ATGGAAGAGAACTGGGAGAATATGGCCTTCAAGAATACACTGAAGTTAAGACTGTCACAATCAAAATCCCACAGAAGAA
CTCATAATTATGCTTGATGTGCAGAATTTAGCTTCTTCAAATGAATCCGAAAAAAGCTATTTGAATTC
CitationMaden M, Blentic A, Reijntjes S, Seguin S, Gale E, Graham A. (2007). Retinoic acid is required for specification of the ventral eye field and for Rathke's pouch in the avian embryo. Int J Dev Biol. 2007;51(3):191-200.
Copyright"Reprinted from Int. J. Dev. Biol., 51, Maden M, Blentic A, Reijntjes S, Seguin S, Gale E, Graham A, Retinoic acid is required for specification of the ventral eye field and for Rathke's pouch in the avian embryo, 191-200, Copyright (2007), with permission from Copyright © 2007 UBC Press". All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc #NM_204577). Images are quail, but sequence and map shown are chick.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
Eye
Quail
31-44
stage 44
Eye
Nasal Placcode/Nerve
Fig. 2. All images for comparison.
Quail

Entry 2

GEISHA IdALDH1.Peters.2002Data SourcePublication
Complete cDNA Template Probeshow
TCTGGGTATGGAGAGAGGAGAGCCCAAGCCTCAGAAATGGGGGATTGTTAGTTAGGTCTTCTCCTGGCACTAGAGCCTA
AACACTACATTACCTGCACTGTGCACACACCTGAAACCTGGTCTGTTAAATTTGTGTGCTGCTGTTTTATTAAGCACTG
TATTACCTAACCCAACAAATAATCTAAAGGTAGTTTTGAAGTGAGGTCAGAGTCAGCTCAGCACTGGATGTATTTAAGG
TCATTAAAGATTCAGTGTCATGGTTTTGCATGGGAATCTTCCAAAGAAGCTCTGTCAAAAAGCAGTTATTCAAAAAGCT
GTTATAATACATTCAATATAAACATGTCTATGCACAAAATAAATTATAAGAAGAAAATTCATATGTAAAGATCTTTGTG
CATAAGCATAAAATCTAGAGATTATTCAAGGTTCAGAAAGTAGTACATTGCCTTTACACTGGGATCATTCTCTTCTACC
TACTTTGTGTGTTTCTAATTCCTAGCACAAGGAAAACTACATTTAATTTTGTGTAATACAGACTAACAAAACCTGATGT
TTCCCTTGCTTTTTTCTTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT
TTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTTCCTTCTTTTTAT
TTTTTTTAAGCTAAGGAAGAAGAAGAGGAACAAACCACTTTCTTCCATGAGTATTTTGCTGACAGAAATACTTAAATCA
ATAAATTGTGGAAAAAGCTGTTGATAGCGTTGCAACAGTTGTATTTTGCAATTTGAGCTGTTCTCCATTGGGTGCTGAA
GTATTTCCGAACAAAAAGCATAAGTCTGAGTTCAGTACAGCATTGGATTGAGTATATTTCTTGCATGTTCCAGCAGGGA
ATTGTTGTCTTTTCTTGGAAATTAAAGGCAAATCCATTCAGAGGGCTCTCTTCTCACCACTTTGTAGCGTAGCAGTATC
CGCACTTCCTCTCCCTCCCCCATTTTTCTTTTCCTTTCTCCATCCCCTTTAAATTGTAATTCAATCTCTTCCAATTCAT
GATCTCTTTTCTCTTTTTGCACTCCCTCCACCCTCTCTCTCTCTCATTAGTTTAACTTGAGTTAATTAGGAATAGTAGG
CAGCCCTCAATCTGTTATGTGTTAAAATAGAACAATCCAAAACAGAAAGACACAGACACAACTATGTGATTTCAATTGT
CTAAAGGAGACAGAAAACCAGTGGGGATTCTCTTATCAAGGCTAACATCTCCCCAATGGTTAATGTAACTGTCTTTAAA
ATGTTCCACAAATGCAGATCTAGGATAACAATCTTTCCGTCATGTTTCCTTTTCTTTTTCTTTTCTTTTCTTTTTTTTT
TTTTTTTTCATTTCATCATTGGCAAGAATGAGTGAATTGGATTGACATGGAGGTGAGAGAGGAAGAGAAACAGTCTACA
CGTCAAAATGACAATGTATATTACATGGTTAACAGAATGAGTGGTACGTGCAATGGCTGCGGGTATTTTCATCTGCTGT
GTGTACAATAAGCTCTTTTTTTTCCAAGTATATCATCAAGATCACACTCAATTCAATGCCGATTATGTGTTTGCTTGAA
GGATCTCTTTCTCTGAGTAATATTACTTGATAAACACAGAACTGAAGTAAGAATCTAAGTATTCATTTGTTGCTGTTAC
TGAATCGTGCATATATAGAGGTCATGACTGGTACTCTGACAGTAGTGCTGATCGCAGACCTTAGGGCAGAGTGCGCAGT
GGATTTGAAATATTACAGACCTAGGAAATCAAGCCCTGATTGTAAAGCTGCTTTCCAGTAAGTGAAGAAGTTCAATTAA
AATCTGGGGACCTGCCTCCTGAGAGAAAGTAATTTTACAGGAGCGTACTCAAACTCCTCACCTGGCAACATGAAGAAGC
AAGGCTCACCCAGCAATCCTGCTCCTGTTTTGCCAGCACTGCCAGAACCACTCAAAGATCTGAAAATTAAGTACACTAA
GATATTTATAAACAATGAATGGCATGATTCAGTCAGCGGTAAAAAATTTGAAGTCTTTAACCCCGCAAATGAGGAGAAA
ATCTGTGAGGTTGCAGAAGGTGACAAGGCAGATATAGACAAGGCTGTGAAAGCAGCTAGAAAAGCTTTTGAGCTCGGAT
CACCCTGGCGTACCATGGATGCTTCAGAACGAGGAAGGCTCTTGAACAAACTAGCTGATTTAGTTGAAAGAGATCGACT
GACTTTAGCTACAATGGAAGCTATTGATGGTGGTAAACTCTTTTCTACTGCCTACCTAATGGATTTAGGTGCTTGTATT
AAAACAATACGCTACTGTGCAGGCTGGGCTGATAAAATCCATGGTCGAACTGTTCCAATGGATGGAAACTTTTTCACAT
TTACAAGACATGAGCCTGTTGGTGTGTGTGGACAAATTATTCCTTGGAACTTCCCATTGGTTATGTTTATCTGGAAGAT
CGCCCCTGCACTTTGTTGTGGAAACACAGTGGTTGTCAAACCAGCGGAACAAACACCTCTGAGTGCCCTTTACATGGGA
TCCTTAATTAAAGAGGCAGGATTTCCACCTGGAGTTGTGAATATTGTGCCAGGCTTTGGACCCACCGCTGGAGCAGCAA
TTTCTCACCACATGGACATAGACAAAGTGTCCTTCACAGGCTCTACTGAGGTTGGTAAATTGATCAAAGAAGCAGCAGG
GAAGACCAATCTGAAGAGAGTTACACTGGAACTTGGAGGAAAAAGTCCTAACATTATATTTGCAGATGCAGACTTGGAT
GAAGCTGCGGAATTTGCACACATTGGTCTGTTTTACCACCAAGGGCAGTGTTGTATAGCAGGATCCAGAATTTTTGTGG
AAGAGCCTATTTATGATGAGTTTGTTCGCCGGAGCATTGAACGAGCAAAGAAGTACACTCTTGGGGATCCTCTGTTACC
TGGTGTACAGCAAGGCCCTCAAATTGACAAGGAGCAGTTTCAAAAAATCCTGGATCTCATTGAGAGTGGGAAAAAAGAA
GGAGCCAAGCTGGAATGTGGAGGAGGTCCATGGGGAAACAAGGGTTACTTCATCCAGCCCACGGTTTTTTCTAATGTTA
CGGATGATATGCGCATCGCCAAAGAAGAGATATTTGGACCTGTTCAACAAATCATGAAGTTCAAAACTATAGATGAAGT
TATCAAGAGGGCAAATAACACTACCTATGGCTTAGCAGCAGCAGTTTTTACCAAAGACATTGATAAAGCACTGACATTT
GCATCTGCTCTTCAGGCTGGGACAGTGTGGGTTAATTGTTATAGTGCATTTTCAGCTCAGTGTCCTTTTGGAGGATTTA
AGATGTCAGGAAATGGAAGAGAACTGGGAGAATATGGCCTTCAAGAATACACTGAAGTTAAGACTGTCACAATCAAAAT
CCCACAGAAGAACTCATAATTATGCTTGATGTGCAGAATTTAGCTTCTTCAAATGAATCCGAAAAAAGCTATTTGAATT
C
CitationPeters MA, Cepko CL (2002). The dorsal-ventral axis of the neural retina is divided into multiple domains of restricted gene expression which exhibit features of lineage compartments. Dev Biol. 2002 Nov 1;251(1):59-73.
Copyright"Reprinted from Developmental Biology, 251(1), Peters MA, Cepko CL, The dorsal-ventral axis of the neural retina is divided into multiple domains of restricted gene expression which exhibit features of lineage compartments, 59-73, Copyright (2002), with permission from Elsevier". Copyright © ( 2002) Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (X58869).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 17
Retina
 
19-24
stage 19
stage 22
Retina
 
31-44
stage 44
stage 44
Retina
 

Entry 3

GEISHA IdRALDH1.Blentic.2003Data SourcePublication
Complete cDNA Template Probeshow
TCTGGGTATGGAGAGAGGAGAGCCCAAGCCTCAGAAATGGGGGATTGTTAGTTAGGTCTTCTCCTGGCACTAGAGCCTA
AACACTACATTACCTGCACTGTGCACACACCTGAAACCTGGTCTGTTAAATTTGTGTGCTGCTGTTTTATTAAGCACTG
TATTACCTAACCCAACAAATAATCTAAAGGTAGTTTTGAAGTGAGGTCAGAGTCAGCTCAGCACTGGATGTATTTAAGG
TCATTAAAGATTCAGTGTCATGGTTTTGCATGGGAATCTTCCAAAGAAGCTCTGTCAAAAAGCAGTTATTCAAAAAGCT
GTTATAATACATTCAATATAAACATGTCTATGCACAAAATAAATTATAAGAAGAAAATTCATATGTAAAGATCTTTGTG
CATAAGCATAAAATCTAGAGATTATTCAAGGTTCAGAAAGTAGTACATTGCCTTTACACTGGGATCATTCTCTTCTACC
TACTTTGTGTGTTTCTAATTCCTAGCACAAGGAAAACTACATTTAATTTTGTGTAATACAGACTAACAAAACCTGATGT
TTCCCTTGCTTTTTTCTTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT
TTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTTCCTTCTTTTTAT
TTTTTTTAAGCTAAGGAAGAAGAAGAGGAACAAACCACTTTCTTCCATGAGTATTTTGCTGACAGAAATACTTAAATCA
ATAAATTGTGGAAAAAGCTGTTGATAGCGTTGCAACAGTTGTATTTTGCAATTTGAGCTGTTCTCCATTGGGTGCTGAA
GTATTTCCGAACAAAAAGCATAAGTCTGAGTTCAGTACAGCATTGGATTGAGTATATTTCTTGCATGTTCCAGCAGGGA
ATTGTTGTCTTTTCTTGGAAATTAAAGGCAAATCCATTCAGAGGGCTCTCTTCTCACCACTTTGTAGCGTAGCAGTATC
CGCACTTCCTCTCCCTCCCCCATTTTTCTTTTCCTTTCTCCATCCCCTTTAAATTGTAATTCAATCTCTTCCAATTCAT
GATCTCTTTTCTCTTTTTGCACTCCCTCCACCCTCTCTCTCTCTCATTAGTTTAACTTGAGTTAATTAGGAATAGTAGG
CAGCCCTCAATCTGTTATGTGTTAAAATAGAACAATCCAAAACAGAAAGACACAGACACAACTATGTGATTTCAATTGT
CTAAAGGAGACAGAAAACCAGTGGGGATTCTCTTATCAAGGCTAACATCTCCCCAATGGTTAATGTAACTGTCTTTAAA
ATGTTCCACAAATGCAGATCTAGGATAACAATCTTTCCGTCATGTTTCCTTTTCTTTTTCTTTTCTTTTCTTTTTTTTT
TTTTTTTTCATTTCATCATTGGCAAGAATGAGTGAATTGGATTGACATGGAGGTGAGAGAGGAAGAGAAACAGTCTACA
CGTCAAAATGACAATGTATATTACATGGTTAACAGAATGAGTGGTACGTGCAATGGCTGCGGGTATTTTCATCTGCTGT
GTGTACAATAAGCTCTTTTTTTTCCAAGTATATCATCAAGATCACACTCAATTCAATGCCGATTATGTGTTTGCTTGAA
GGATCTCTTTCTCTGAGTAATATTACTTGATAAACACAGAACTGAAGTAAGAATCTAAGTATTCATTTGTTGCTGTTAC
TGAATCGTGCATATATAGAGGTCATGACTGGTACTCTGACAGTAGTGCTGATCGCAGACCTTAGGGCAGAGTGCGCAGT
GGATTTGAAATATTACAGACCTAGGAAATCAAGCCCTGATTGTAAAGCTGCTTTCCAGTAAGTGAAGAAGTTCAATTAA
AATCTGGGGACCTGCCTCCTGAGAGAAAGTAATTTTACAGGAGCGTACTCAAACTCCTCACCTGGCAACATGAAGAAGC
AAGGCTCACCCAGCAATCCTGCTCCTGTTTTGCCAGCACTGCCAGAACCACTCAAAGATCTGAAAATTAAGTACACTAA
GATATTTATAAACAATGAATGGCATGATTCAGTCAGCGGTAAAAAATTTGAAGTCTTTAACCCCGCAAATGAGGAGAAA
ATCTGTGAGGTTGCAGAAGGTGACAAGGCAGATATAGACAAGGCTGTGAAAGCAGCTAGAAAAGCTTTTGAGCTCGGAT
CACCCTGGCGTACCATGGATGCTTCAGAACGAGGAAGGCTCTTGAACAAACTAGCTGATTTAGTTGAAAGAGATCGACT
GACTTTAGCTACAATGGAAGCTATTGATGGTGGTAAACTCTTTTCTACTGCCTACCTAATGGATTTAGGTGCTTGTATT
AAAACAATACGCTACTGTGCAGGCTGGGCTGATAAAATCCATGGTCGAACTGTTCCAATGGATGGAAACTTTTTCACAT
TTACAAGACATGAGCCTGTTGGTGTGTGTGGACAAATTATTCCTTGGAACTTCCCATTGGTTATGTTTATCTGGAAGAT
CGCCCCTGCACTTTGTTGTGGAAACACAGTGGTTGTCAAACCAGCGGAACAAACACCTCTGAGTGCCCTTTACATGGGA
TCCTTAATTAAAGAGGCAGGATTTCCACCTGGAGTTGTGAATATTGTGCCAGGCTTTGGACCCACCGCTGGAGCAGCAA
TTTCTCACCACATGGACATAGACAAAGTGTCCTTCACAGGCTCTACTGAGGTTGGTAAATTGATCAAAGAAGCAGCAGG
GAAGACCAATCTGAAGAGAGTTACACTGGAACTTGGAGGAAAAAGTCCTAACATTATATTTGCAGATGCAGACTTGGAT
GAAGCTGCGGAATTTGCACACATTGGTCTGTTTTACCACCAAGGGCAGTGTTGTATAGCAGGATCCAGAATTTTTGTGG
AAGAGCCTATTTATGATGAGTTTGTTCGCCGGAGCATTGAACGAGCAAAGAAGTACACTCTTGGGGATCCTCTGTTACC
TGGTGTACAGCAAGGCCCTCAAATTGACAAGGAGCAGTTTCAAAAAATCCTGGATCTCATTGAGAGTGGGAAAAAAGAA
GGAGCCAAGCTGGAATGTGGAGGAGGTCCATGGGGAAACAAGGGTTACTTCATCCAGCCCACGGTTTTTTCTAATGTTA
CGGATGATATGCGCATCGCCAAAGAAGAGATATTTGGACCTGTTCAACAAATCATGAAGTTCAAAACTATAGATGAAGT
TATCAAGAGGGCAAATAACACTACCTATGGCTTAGCAGCAGCAGTTTTTACCAAAGACATTGATAAAGCACTGACATTT
GCATCTGCTCTTCAGGCTGGGACAGTGTGGGTTAATTGTTATAGTGCATTTTCAGCTCAGTGTCCTTTTGGAGGATTTA
AGATGTCAGGAAATGGAAGAGAACTGGGAGAATATGGCCTTCAAGAATACACTGAAGTTAAGACTGTCACAATCAAAAT
CCCACAGAAGAACTCATAATTATGCTTGATGTGCAGAATTTAGCTTCTTCAAATGAATCCGAAAAAAGCTATTTGAATT
C
CitationBlentic A, Gale E, Maden M. Retinoic acid signalling centres in the avian embryo identified by sites of expression of synthesising and catabolising enzymes. Dev Dyn. 2003 May;227(1):114-27.
CopyrightCopyright © 2003 John Wiley & Sons, Inc. All Rights Reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204577)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
stage 12
stage 12
stage 12
Endoderm
Eye
 
13-18
stage 15
stage 18
stage 18
Foregut
Retina
 
19-20
stage 20
Endoderm
Gut
Intermediate Mesoderm
 

Entry 4

GEISHA IdRALDH1.Wilson.2007Data SourceDirect Submission
Complete cDNA Template Probeshow
TCTGGGTATGGAGAGAGGAGAGCCCAAGCCTCAGAAATGGGGGATTGTTAGTTAGGTCTTCTCCTGGCACTAGAGCCTA
AACACTACATTACCTGCACTGTGCACACACCTGAAACCTGGTCTGTTAAATTTGTGTGCTGCTGTTTTATTAAGCACTG
TATTACCTAACCCAACAAATAATCTAAAGGTAGTTTTGAAGTGAGGTCAGAGTCAGCTCAGCACTGGATGTATTTAAGG
TCATTAAAGATTCAGTGTCATGGTTTTGCATGGGAATCTTCCAAAGAAGCTCTGTCAAAAAGCAGTTATTCAAAAAGCT
GTTATAATACATTCAATATAAACATGTCTATGCACAAAATAAATTATAAGAAGAAAATTCATATGTAAAGATCTTTGTG
CATAAGCATAAAATCTAGAGATTATTCAAGGTTCAGAAAGTAGTACATTGCCTTTACACTGGGATCATTCTCTTCTACC
TACTTTGTGTGTTTCTAATTCCTAGCACAAGGAAAACTACATTTAATTTTGTGTAATACAGACTAACAAAACCTGATGT
TTCCCTTGCTTTTTTCTTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT
TTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTTCCTTCTTTTTAT
TTTTTTTAAGCTAAGGAAGAAGAAGAGGAACAAACCACTTTCTTCCATGAGTATTTTGCTGACAGAAATACTTAAATCA
ATAAATTGTGGAAAAAGCTGTTGATAGCGTTGCAACAGTTGTATTTTGCAATTTGAGCTGTTCTCCATTGGGTGCTGAA
GTATTTCCGAACAAAAAGCATAAGTCTGAGTTCAGTACAGCATTGGATTGAGTATATTTCTTGCATGTTCCAGCAGGGA
ATTGTTGTCTTTTCTTGGAAATTAAAGGCAAATCCATTCAGAGGGCTCTCTTCTCACCACTTTGTAGCGTAGCAGTATC
CGCACTTCCTCTCCCTCCCCCATTTTTCTTTTCCTTTCTCCATCCCCTTTAAATTGTAATTCAATCTCTTCCAATTCAT
GATCTCTTTTCTCTTTTTGCACTCCCTCCACCCTCTCTCTCTCTCATTAGTTTAACTTGAGTTAATTAGGAATAGTAGG
CAGCCCTCAATCTGTTATGTGTTAAAATAGAACAATCCAAAACAGAAAGACACAGACACAACTATGTGATTTCAATTGT
CTAAAGGAGACAGAAAACCAGTGGGGATTCTCTTATCAAGGCTAACATCTCCCCAATGGTTAATGTAACTGTCTTTAAA
ATGTTCCACAAATGCAGATCTAGGATAACAATCTTTCCGTCATGTTTCCTTTTCTTTTTCTTTTCTTTTCTTTTTTTTT
TTTTTTTTCATTTCATCATTGGCAAGAATGAGTGAATTGGATTGACATGGAGGTGAGAGAGGAAGAGAAACAGTCTACA
CGTCAAAATGACAATGTATATTACATGGTTAACAGAATGAGTGGTACGTGCAATGGCTGCGGGTATTTTCATCTGCTGT
GTGTACAATAAGCTCTTTTTTTTCCAAGTATATCATCAAGATCACACTCAATTCAATGCCGATTATGTGTTTGCTTGAA
GGATCTCTTTCTCTGAGTAATATTACTTGATAAACACAGAACTGAAGTAAGAATCTAAGTATTCATTTGTTGCTGTTAC
TGAATCGTGCATATATAGAGGTCATGACTGGTACTCTGACAGTAGTGCTGATCGCAGACCTTAGGGCAGAGTGCGCAGT
GGATTTGAAATATTACAGACCTAGGAAATCAAGCCCTGATTGTAAAGCTGCTTTCCAGTAAGTGAAGAAGTTCAATTAA
AATCTGGGGACCTGCCTCCTGAGAGAAAGTAATTTTACAGGAGCGTACTCAAACTCCTCACCTGGCAACATGAAGAAGC
AAGGCTCACCCAGCAATCCTGCTCCTGTTTTGCCAGCACTGCCAGAACCACTCAAAGATCTGAAAATTAAGTACACTAA
GATATTTATAAACAATGAATGGCATGATTCAGTCAGCGGTAAAAAATTTGAAGTCTTTAACCCCGCAAATGAGGAGAAA
ATCTGTGAGGTTGCAGAAGGTGACAAGGCAGATATAGACAAGGCTGTGAAAGCAGCTAGAAAAGCTTTTGAGCTCGGAT
CACCCTGGCGTACCATGGATGCTTCAGAACGAGGAAGGCTCTTGAACAAACTAGCTGATTTAGTTGAAAGAGATCGACT
GACTTTAGCTACAATGGAAGCTATTGATGGTGGTAAACTCTTTTCTACTGCCTACCTAATGGATTTAGGTGCTTGTATT
AAAACAATACGCTACTGTGCAGGCTGGGCTGATAAAATCCATGGTCGAACTGTTCCAATGGATGGAAACTTTTTCACAT
TTACAAGACATGAGCCTGTTGGTGTGTGTGGACAAATTATTCCTTGGAACTTCCCATTGGTTATGTTTATCTGGAAGAT
CGCCCCTGCACTTTGTTGTGGAAACACAGTGGTTGTCAAACCAGCGGAACAAACACCTCTGAGTGCCCTTTACATGGGA
TCCTTAATTAAAGAGGCAGGATTTCCACCTGGAGTTGTGAATATTGTGCCAGGCTTTGGACCCACCGCTGGAGCAGCAA
TTTCTCACCACATGGACATAGACAAAGTGTCCTTCACAGGCTCTACTGAGGTTGGTAAATTGATCAAAGAAGCAGCAGG
GAAGACCAATCTGAAGAGAGTTACACTGGAACTTGGAGGAAAAAGTCCTAACATTATATTTGCAGATGCAGACTTGGAT
GAAGCTGCGGAATTTGCACACATTGGTCTGTTTTACCACCAAGGGCAGTGTTGTATAGCAGGATCCAGAATTTTTGTGG
AAGAGCCTATTTATGATGAGTTTGTTCGCCGGAGCATTGAACGAGCAAAGAAGTACACTCTTGGGGATCCTCTGTTACC
TGGTGTACAGCAAGGCCCTCAAATTGACAAGGAGCAGTTTCAAAAAATCCTGGATCTCATTGAGAGTGGGAAAAAAGAA
GGAGCCAAGCTGGAATGTGGAGGAGGTCCATGGGGAAACAAGGGTTACTTCATCCAGCCCACGGTTTTTTCTAATGTTA
CGGATGATATGCGCATCGCCAAAGAAGAGATATTTGGACCTGTTCAACAAATCATGAAGTTCAAAACTATAGATGAAGT
TATCAAGAGGGCAAATAACACTACCTATGGCTTAGCAGCAGCAGTTTTTACCAAAGACATTGATAAAGCACTGACATTT
GCATCTGCTCTTCAGGCTGGGACAGTGTGGGTTAATTGTTATAGTGCATTTTCAGCTCAGTGTCCTTTTGGAGGATTTA
AGATGTCAGGAAATGGAAGAGAACTGGGAGAATATGGCCTTCAAGAATACACTGAAGTTAAGACTGTCACAATCAAAAT
CCCACAGAAGAACTCATAATTATGCTTGATGTGCAGAATTTAGCTTCTTCAAATGAATCCGAAAAAAGCTATTTGAATT
C
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204577.4
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 21
Hindbrain
 
25-30
stage 26
stage 29
stage 30
stage 30
Hindbrain
Midbrain
 
31
stage 31
stage 31
stage 31
Hindbrain
 

Entry 5

GEISHA IdRALDH1.Sánchez-Guardado.2009Data SourcePublication
Complete cDNA Template Probeshow
TCTGGGTATGGAGAGAGGAGAGCCCAAGCCTCAGAAATGGGGGATTGTTAGTTAGGTCTTCTCCTGGCACTAGAGCCTA
AACACTACATTACCTGCACTGTGCACACACCTGAAACCTGGTCTGTTAAATTTGTGTGCTGCTGTTTTATTAAGCACTG
TATTACCTAACCCAACAAATAATCTAAAGGTAGTTTTGAAGTGAGGTCAGAGTCAGCTCAGCACTGGATGTATTTAAGG
TCATTAAAGATTCAGTGTCATGGTTTTGCATGGGAATCTTCCAAAGAAGCTCTGTCAAAAAGCAGTTATTCAAAAAGCT
GTTATAATACATTCAATATAAACATGTCTATGCACAAAATAAATTATAAGAAGAAAATTCATATGTAAAGATCTTTGTG
CATAAGCATAAAATCTAGAGATTATTCAAGGTTCAGAAAGTAGTACATTGCCTTTACACTGGGATCATTCTCTTCTACC
TACTTTGTGTGTTTCTAATTCCTAGCACAAGGAAAACTACATTTAATTTTGTGTAATACAGACTAACAAAACCTGATGT
TTCCCTTGCTTTTTTCTTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT
TTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTTCCTTCTTTTTAT
TTTTTTTAAGCTAAGGAAGAAGAAGAGGAACAAACCACTTTCTTCCATGAGTATTTTGCTGACAGAAATACTTAAATCA
ATAAATTGTGGAAAAAGCTGTTGATAGCGTTGCAACAGTTGTATTTTGCAATTTGAGCTGTTCTCCATTGGGTGCTGAA
GTATTTCCGAACAAAAAGCATAAGTCTGAGTTCAGTACAGCATTGGATTGAGTATATTTCTTGCATGTTCCAGCAGGGA
ATTGTTGTCTTTTCTTGGAAATTAAAGGCAAATCCATTCAGAGGGCTCTCTTCTCACCACTTTGTAGCGTAGCAGTATC
CGCACTTCCTCTCCCTCCCCCATTTTTCTTTTCCTTTCTCCATCCCCTTTAAATTGTAATTCAATCTCTTCCAATTCAT
GATCTCTTTTCTCTTTTTGCACTCCCTCCACCCTCTCTCTCTCTCATTAGTTTAACTTGAGTTAATTAGGAATAGTAGG
CAGCCCTCAATCTGTTATGTGTTAAAATAGAACAATCCAAAACAGAAAGACACAGACACAACTATGTGATTTCAATTGT
CTAAAGGAGACAGAAAACCAGTGGGGATTCTCTTATCAAGGCTAACATCTCCCCAATGGTTAATGTAACTGTCTTTAAA
ATGTTCCACAAATGCAGATCTAGGATAACAATCTTTCCGTCATGTTTCCTTTTCTTTTTCTTTTCTTTTCTTTTTTTTT
TTTTTTTTCATTTCATCATTGGCAAGAATGAGTGAATTGGATTGACATGGAGGTGAGAGAGGAAGAGAAACAGTCTACA
CGTCAAAATGACAATGTATATTACATGGTTAACAGAATGAGTGGTACGTGCAATGGCTGCGGGTATTTTCATCTGCTGT
GTGTACAATAAGCTCTTTTTTTTCCAAGTATATCATCAAGATCACACTCAATTCAATGCCGATTATGTGTTTGCTTGAA
GGATCTCTTTCTCTGAGTAATATTACTTGATAAACACAGAACTGAAGTAAGAATCTAAGTATTCATTTGTTGCTGTTAC
TGAATCGTGCATATATAGAGGTCATGACTGGTACTCTGACAGTAGTGCTGATCGCAGACCTTAGGGCAGAGTGCGCAGT
GGATTTGAAATATTACAGACCTAGGAAATCAAGCCCTGATTGTAAAGCTGCTTTCCAGTAAGTGAAGAAGTTCAATTAA
AATCTGGGGACCTGCCTCCTGAGAGAAAGTAATTTTACAGGAGCGTACTCAAACTCCTCACCTGGCAACATGAAGAAGC
AAGGCTCACCCAGCAATCCTGCTCCTGTTTTGCCAGCACTGCCAGAACCACTCAAAGATCTGAAAATTAAGTACACTAA
GATATTTATAAACAATGAATGGCATGATTCAGTCAGCGGTAAAAAATTTGAAGTCTTTAACCCCGCAAATGAGGAGAAA
ATCTGTGAGGTTGCAGAAGGTGACAAGGCAGATATAGACAAGGCTGTGAAAGCAGCTAGAAAAGCTTTTGAGCTCGGAT
CACCCTGGCGTACCATGGATGCTTCAGAACGAGGAAGGCTCTTGAACAAACTAGCTGATTTAGTTGAAAGAGATCGACT
GACTTTAGCTACAATGGAAGCTATTGATGGTGGTAAACTCTTTTCTACTGCCTACCTAATGGATTTAGGTGCTTGTATT
AAAACAATACGCTACTGTGCAGGCTGGGCTGATAAAATCCATGGTCGAACTGTTCCAATGGATGGAAACTTTTTCACAT
TTACAAGACATGAGCCTGTTGGTGTGTGTGGACAAATTATTCCTTGGAACTTCCCATTGGTTATGTTTATCTGGAAGAT
CGCCCCTGCACTTTGTTGTGGAAACACAGTGGTTGTCAAACCAGCGGAACAAACACCTCTGAGTGCCCTTTACATGGGA
TCCTTAATTAAAGAGGCAGGATTTCCACCTGGAGTTGTGAATATTGTGCCAGGCTTTGGACCCACCGCTGGAGCAGCAA
TTTCTCACCACATGGACATAGACAAAGTGTCCTTCACAGGCTCTACTGAGGTTGGTAAATTGATCAAAGAAGCAGCAGG
GAAGACCAATCTGAAGAGAGTTACACTGGAACTTGGAGGAAAAAGTCCTAACATTATATTTGCAGATGCAGACTTGGAT
GAAGCTGCGGAATTTGCACACATTGGTCTGTTTTACCACCAAGGGCAGTGTTGTATAGCAGGATCCAGAATTTTTGTGG
AAGAGCCTATTTATGATGAGTTTGTTCGCCGGAGCATTGAACGAGCAAAGAAGTACACTCTTGGGGATCCTCTGTTACC
TGGTGTACAGCAAGGCCCTCAAATTGACAAGGAGCAGTTTCAAAAAATCCTGGATCTCATTGAGAGTGGGAAAAAAGAA
GGAGCCAAGCTGGAATGTGGAGGAGGTCCATGGGGAAACAAGGGTTACTTCATCCAGCCCACGGTTTTTTCTAATGTTA
CGGATGATATGCGCATCGCCAAAGAAGAGATATTTGGACCTGTTCAACAAATCATGAAGTTCAAAACTATAGATGAAGT
TATCAAGAGGGCAAATAACACTACCTATGGCTTAGCAGCAGCAGTTTTTACCAAAGACATTGATAAAGCACTGACATTT
GCATCTGCTCTTCAGGCTGGGACAGTGTGGGTTAATTGTTATAGTGCATTTTCAGCTCAGTGTCCTTTTGGAGGATTTA
AGATGTCAGGAAATGGAAGAGAACTGGGAGAATATGGCCTTCAAGAATACACTGAAGTTAAGACTGTCACAATCAAAAT
CCCACAGAAGAACTCATAATTATGCTTGATGTGCAGAATTTAGCTTCTTCAAATGAATCCGAAAAAAGCTATTTGAATT
C
CitationSánchez-Guardado LO, Ferran JL, Mijares J, Puelles L, Rodríguez-Gallardo L, Hidalgo-Sánchez M. Raldh3 gene expression pattern in the developing chicken inner ear. J Comp Neurol. 2009 May 1;514(1):49-65. doi: 10.1002/cne.21984.
CopyrightCopyright © 1999–2013 John Wiley & Sons, Inc. All Rights Reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204577.4
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
stage 18
Ear/Otic Placode
Eye
 

Entry 6

GEISHA IdRALDH1.Smith.2018Data SourcePublication
Complete cDNA Template Probeshow
TTGCAGAAGGTGACAAGGCAGATATAGACAAGGCTGTGAAAGCAGCTAGAAAAGCTTTTGAGCTCGGATCACCCTGGCG
TACCATGGATGCTTCAGAACGAGGAAGGCTCTTGAACAAACTAGCTGATTTAGTTGAAAGAGATCGACTGACTTTAGCT
ACAATGGAAGCTATTGATGGTGGTAAACTCTTTTCTACTGCCTACCTAATGGATTTAGGTGCTTGTATTAAAACAATAC
GCTACTGTGCAGGCTGGGCTGATAAAATCCATGGTCGAACTGTTCCAATGGATGGAAACTTTTTCACATTTACAAGACA
TGAGCCTGTTGGTGTGTGTGGACAAATTATTCCTTGGAACTTCCCATTGGTTATGTTTATCTGGAAGATCGCCCCTGCA
CTTTGTTGTGGAAACACAGTGGTTGTCAAACCAGCGGAACAAACACCTCTGAGTGCCCTTTACATGGGATCCTTAATTA
AAGAGGCAGGATTTCCACCTGGAGTTGTGAATATTGTGCCAGGCTTTGGACCCACCGCTGGAGCAGCAATTTCTCACCA
CATGGACATAGACAAAGTGTCCTTCACAGGCTCTACTGAGGTTGGTAAATTGATCAAAGAAGCAGCAGGGAAGACCAAT
CTGAAGAGAGTTACACTGGAACTTGGAGGAAAAAGTCCTAACATTATATTTGCAGATGCAGACTTGGATGAAGCTGTGG
AATTTGCACACATTGGTCTGTTTTACCACCAAGGGCAGTGTTGTATAGCAGGATCCAGAATTTTTGTGGAAGAGCCTAT
TTATGATGAGTTTGTTCGCCGGAGCATTGAACGAGCAAAGAAGTACACTCTTGGGGATCCTCTGTTACCTGGTGTACAG
CAAGGCCCTCAAATTGACAAGGAGCAGTTTCAAAAAATCCTGGATCTCATTGAGAGTGGGAAAAAAGAAGGAGCCAAGC
TGGAATGTGGAGGAGGTCCATGGGGAAACAAGGGT
CitationJonathan N Smith, Heather M Walker, Hannah Thompson, J Martin Collinson, Neil Vargesson, Lynda Erskine. Lens-regulated retinoic acid signalling controls expansion of the developing eye. Development. 2018 Oct 10;145(19):dev167171. DOI: 10.1242/dev.167171.
CopyrightCopyright © 2018. Published by The Company of Biologists Ltd.
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Smith et al. 2018. RALDH1 is also known as ALDH1A1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-23
stage 23
Retina
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.4119

Mouse

EmageMGI:1353450
EurexpressMGI:1353450
MGI GXDMGI:1353450

Frog

Xenbase987057

Fruit Fly

BDGPFBgn0051075

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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