GEISHA - A Chicken Embryo Gene Expression Database
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SCML2
sex comb on midleg-like 2 (Drosophila)

Gene
Official SymbolSCML2
Official Full Namesex comb on midleg-like 2 (Drosophila)
CGNC ID12384
also known assex comb on midleg-like protein 2
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_416812
PolypeptideXP_416812
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.49865
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human10389ENSG00000102098MIM:300208
Mouse107815ENSMUSG00000000037All phenotypic alleles (2):Targeted, other(2) MGI:1340042
Xenopus780057, 7350376043727
Zebrafish100330797ZDB-GENE-130530-546ZFIN:ZDB-GENE-130530-546
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene418613
Ensembl Gene
KEGGgga:418613
GEISHA IdSCML2.Trevers.2023Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GCGGCTCGAGCTCTGATACTCCTCAGGTTTCAGCAGAGATACTGCTGCAAAATAATGTGTTCTGTGGCTCACCGGCGTC
AAAGAGCTTGTTAGTTTAAGTGACTGCAATGCAATTTTCATGTGGGCTTTGAGGATTGTTTTTATTACTCCATTGTTAG
ACATTGGACACAAAAGGTTATCTATGTTGATTTGTTTGCATATCTTTGTGGTGCGTGTGTGCTTAGATGAATTATACAA
GCATGTTCTGTATATTAGGAAAAGGTCAGAGCATTGATTGGAAAAGCAGAATATTTTCTCTTTGTGTTTGGAAAATACT
GACTTGATCATTGATAAAAACCATATGAAAGTTACAGTTATATATTAAGGAAAACATCATGCCCCGCATGTTGAGTATG
TTGTTTAAACCTTACTTCCACCATGATTTATTACGCTGAAGTTCAGAGTTCTTTAGTCTAAAAAGAAGTAGTGCTCATA
CAATTAACTGAACAGTTTTCATTTTTTCGCGTTGCCGTTGGCAGAGGAGAAACAAAGATGTTTAAAATCTCGGTTCGGC
CTCTATGGAATGAACTTTTTATACATGGCACTATTATGGGTATAAATATTTGTTCAGGGCTTTGTGTGCACCC
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XIII
Area Opaca
 
1-3
stage 3
Mesoderm
Primitive Streak
 
4-6
stage 5
Head Process
Hensen's Node
Neural Plate/Tube
Hensen's node / head process / weak in neural plate
7-8
stage 8
Neural Plate/Tube
Primitive Streak
Somites
weak in neural plate / somites / primitive streak
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.49865

Mouse

EmageMGI:1340042
EurexpressMGI:1340042
MGI GXDMGI:1340042

Frog

Xenbase6043727

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-130530-546
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