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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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SERPINH1
serpin family H member 1

The human orthologue of this gene is associated
with the following human diseases:

Gene

Official Symbol	SERPINH1
Official Full Name	serpin family H member 1
CGNC ID	8518
also known as	HSP47, serpin H1\|47 kDa heat shock protein\|collagen-binding protein\|colligin\|heat shock protein 47\|serine (or cysteine) proteinase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)\|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_205291
Polypeptide	NP_990622
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.4168

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	871	ENSG00000149257	MIM:613848	MIM:600943
Mouse	12406	ENSMUSG00000070436	All phenotypic alleles (1):Targeted, knock-out(1)	MGI:88283
Xenopus	100490491, 100158395			1005104
Zebrafish	100333551, 30449, 555328	ENSDARG00000019949	ZDB-GENE-990415-93, ZDB-GENE-080219-21	ZFIN:ZDB-GENE-990415-93, ZFIN:ZDB-GENE-080219-21

Gene Ontology

Molecular Function	serine-type endopeptidase inhibitor activity, unfolded protein binding
Biological Process	collagen biosynthetic process, collagen fibril organization, more...
Cellular Component	cytoplasm, endoplasmic reticulum-Golgi intermediate compartment, endoplasmic reticulum lumen, more...extracellular space

Links to other databases

Entrez Gene	396228
Ensembl Gene	ENSGALG00000011214
KEGG	gga:396228

GEISHA Id	SERPINH1.Roy.2013	Data Source	Publication
Complete cDNA Template Probe	show GGCCCCGATCCTGCACTGCTCCGGAGGTCCCCAGACAAGTTGGGTGCTGCCAAAACCATGCAGATTTTTCTGGTCCTCG CTCTCTGCGGCCTTGCAGCAGCCGTGCCCTCGGAGGACAGGAAGCTGAGCGACAAGGCAACAACGTTGGCCGACCGCAG CACGACGTTGGCCTTCAACCTCTACCATGCCATGGCCAAAGACAAGAACATGGAGAACATCCTGCTGTCTCCCGTGGTC GTGGCTTCTTCCCTGGGCCTCGTGTCCCTTGGGGGCAAGGCTACAACTGCCTCCCAAGCCAAGGCCGTGCTCAGCGCAG ACAAGCTGAATGATGACTATGTGCACAGCGGGCTGTCGGAGCTCCTCAACGAGGTGAGCAACAGCACAGCCCGTAATGT TACCTGGAAGATCGGCAACCGGTTGTATGGCCCTGCCTCCATCAACTTTGCCGATGACTTCGTGAAGAACAGCAAGAAA CACTACAACTATGAGCACTCCAAGATCAACTTTCGGGACAAGAGGAGCGCCCTGAAATCCATCAACGAGTGGGCAGCCC AGACCACAGATGGGAAACTCCCAGAAGTCACAAAGGATGTTGAGAAAACTGATGGAGCCCTTATTGTCAACGCCATGTT CTTCAAGCCTCACTGGGATGAGAAGTTCCATCATAAGATGGTGGATAACCGTGGCTTCATGGTGACCCGCTCCTACACG GTGGGCGTTCCAATGATGCATCGTACAGGTCTCTACAATTACTATGATGATGAGGCAGAGAAGCTTCAGGTGGTAGAGA TGCCACTGGCTCATAAGCTCTCCAGCATGATCTTTATCATGCCAAACCACGTGGAGCCTCTGGAGAGGGTTGAGAAACT GCTGAACAGGGAACAGCTAAAGACCTGGGCCAGCAAGATGAAGAAGAGATCTGTGGCCATCTCACTGCCTAAGGTCGTC CTGGAAGTCAGCCATGACCTTCAGAAACACTTGGCTGATCTGGGCCTGACAGAAGCCATTGACAAAACCAAGGCTGACC TGTCAAAGATCTCTGGCAAGAAAGATCTTTACTTATCCAACGTCTTCCATGCCGCTGCTCTTGAATGGGACACAGATGG GAACCCCTATGATGCTGACATCTACGGCCGAGAGGAGATGAGGAACCCCAAACTCTTCTACGCTGACCACCCCTTCATC TTCATGATCAAGGACAGCAAAACCAACTCCATTCTCTTCATTGGCAGGCTCGTCAGGCCCAAAGGAGACAAGATGCGTG ATGAGTTGTAGTTTTTTCCCAGAGCTTGTTTTGGTTTGCGTGTTTTTTAGGGGGGGATTTCAAAAAAGGGGAAACACTA TTTTGTATCCTTCTCGAACTATGGGTGCTATTCAGACCAGGGTGCATTGTGATGAGAAACCAGATACACTTTACCTCAC CCCCAGAATACTCCGTTGCACAAACCCACCTCCAGAGGACAGGGGAGCCTGGCACAGTAATCACACGAGTGGACAGGAA CTGGCATGCGTTGTCAGCGATACTTCAGTTGAGATGTTAACGCTGTCCTCCCTGCACCAGCTTAAGTACCTTGCTACTA CCATCAGCCCTGCAAAGCACGAGCCCTCCACCTTTCCATCTCTAATGCTTCTGCACATTTAGTTCTGCCTGCATTTTCC CTTGCTTTGGTGCTGTGGAGTACCACTGAAAGCTGCTCTGGTTCCTCTGCAGTTGTTTCTTGCTTGTGGAGAAGAAAAG TACACTTAACTCAAGTGGTACAAAACACAGGCTGATTCTGTGCTTCACCCAGGTGTACCACTGGGAGCAGAACAGGACT CTGACAACAAGCAGAAGCTGAAATCCTATGCTCTTGTGCCTTTCTGTCCTGCCTAACCCTGCTCTGGATGGCTGATAGA TGCTTCACCTCACCAAGTCTTCAGCTCCTTAGCTAGAATACTGCAAAGCCAGGTGCAGCCTTGGTTTGTATTCTGCAGA AAGGTAGGTGGCTTTTGGATGTCAGCAGAGGCCGAAGAGACAGGCTTCTAGAAAGAGACACCTGTGGAATTATTTAAGT GGCTCTCAGAATTATGAGGAGACTTTTGGGCCAACAACTCCAATTAAGCCAGGCAAATGGAGAAATTTCTGGTGCTCCT GCATCAGCACACAGGACTGTGAAAGAGTTTACACTGTGAAGGTTCCCCTAGTTACAAGCAGGGCTGGTACTCATCAGCT CCTGTACCAGACCAAAGGGACTCTGCTGGCCTCTAGCATGGAGGTGCACCAAGGCTCACTTCCACTTGCATCAGTACAA AGCTTTAGAGCTTCCCTTACCTGACTTCCTAATATCCCTTTTCTGCAGCTCCCTCTCCTCTTTAGCTCCCTGTTTGGCT GAACCTGGATAAAGGCACACTGAAAAACAAATGTATTTATAATTATATACGTATTTATGTCTGATAATTACCAAGTTTC ATAGCCTAAACTTGGAGGTTTTTCCCATCTTCCTCAGATTAAAGGACATTGTCAGGTTAATCCTACTTAAAAGAACTGA TGCAACCCAAGAGCATTGAAGCATGTGTCAGATAGCCTTGCTATGCACTGAGACGTACTGCAAAGCAAGACATGACAAG ACTATTGAAATAGGAATCTGGGTGTCATGTTAGCAGCAGTTACTTGGAACCAGCAGGGACAGTGTGACTGCATTGCTTT TCTTTGTATTTTCCTGCCAATGCATTTGCTGTCATACAAGCCCCATGCTGCATTTTTTTCAGAACATCCATGTGACTGT TTCCACTTATTTATTAACAGCTAAGTTGTTACCTCTTGCATCTTACCAGACATCTCATACAGCAAAAAAATTCAACTTC CAACTCTAGGTTTAACCTGACTGTGTCTTCTCCAGATTTGCAAGTTAGGCAGTCGCAGAAAAGCAGGTCTGCCCTAACT GCCATCCAGCCACACAGGGAGGGCTTACCCTCAGCTCCTTCCTAGTTTGTATTCCCGGGTGCTTTCCCTGAATGTTCCG AAGAGGACCCCACAAGGCTGTACCCAAATGCAGAGGAAGCCTCAAACCCAGCGTGTATGCTACACAACCTGATGAATCA GCGCACGTAAACCCACATGCTGTACCATGTTATGGAAGATGGGGTGGGGGGGGAGAGGGGGAAGAGAAGGGGAGGGCAA GGCAACAGATAGTGTAACTTGCATCATGTGGATGCAGTTGTCCTATGGCTTTTATTGTCCTTGTACCACACGTGTATAA TTTTGAAATAAAACTTTTTCAGTGAAAAAAAAAAAAAAAA
Citation	Roy P, Kumar B, Shende A, Singh A, Meena A, Ghosal R, Ranganathan M, Bandyopadhyay A. A Genome-Wide Screen Indicates Correlation between Differentiation and Expression of Metabolism Related Genes. PLoS One. 2013 May 22;8(5):e63670
Copyright	This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NC