GEISHA - A Chicken Embryo Gene Expression Database
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SETD2
SET domain containing 2

Gene
Official SymbolSETD2
Official Full NameSET domain containing 2
CGNC ID4103
also known ashistone-lysine N-methyltransferase SETD2
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_418510
PolypeptideXP_418510
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.49139
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human29072ENSG00000181555MIM:612778
Mouse235626ENSMUSG00000044791All phenotypic alleles (1):Targeted, knock-out(1) MGI:1918177
Xenopus100492810995487
Zebrafish794199ENSDARG00000062244ZDB-GENE-030131-2140ZFIN:ZDB-GENE-030131-2140
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene420404
Ensembl Gene
KEGGgga:420404
GEISHA IdSETD2.Trevers.2023Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GCGGCTCGAGCTGAGAAGAAAGGTTGGGGGCTCAGAGCTGCCAAAGATCTCCCATCAAACACTTTTGTGTTGGAGTACT
GCGGAGAGGTGCTGGACCACAAAGAGTTCAAGGCACGTGTGAAGGAATATGCCCGCAACAAGAACATCCACTACTACTT
CATGGCTTTGAAGAATGACGAGATAATAGATGCTACCCAGAAAGGAAACTGTTCTCGTTTTATGAACCACAGCTGCGAA
CCAAACTGTGAGACACAAAAGTGGACTGTGAATGGGCAGCTCAGAGTTGGGTTCTTCACCACCAAGCTGGTCCCGTCGG
GCTCCGAGCTGACCTTTGATTACCAGTTCCAGAGATACGGCAAAGAAGCTCAGAAATGTTTCTGTGGCTCAGCCAACTG
CAGAGGCTACCTGGGAGGAGAGAACAGGGTCAGCATCCGGGCTGCAGGGGGGAACGATGAAGAAGGAACGCTCCCGTAA
GAAGGATTCGGTGGACGGGGAGCTGGAGGCACTGCTGGAGAATGGGGAGGGCCTCTCAGACAAGAACCAAGTTCTCAGC
TTGTCCCGGCTGATGGTGCGCATCGAGACCCTGGAGCAGAAGCTCACCTGCCTCAAGCTCATCCAGAACACGCACTCAC
AGTCCTGCCTGAAGTCCTTCCTGGAGTGCCACGGCTTTGTCACTGCTGTGGATCTGGATGACAGAGCTGGGTGACAGCA
GGGGAAGCACCGCAACAACTCAAGCTGCAGCTGGAGATTATGAAGACACTGGAGCTGCTGCCGATACCACCAAGAACAT
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XIII
Area Pellucida
Epiblast
area pellucida epiblast
4-6
stage 4
stage 6
Epiblast
Neural Plate/Tube
almost all epiblast except midline of primitive streak
neural plate except floor plate
7-9
stage 9
Neural Plate/Tube
neural plate except floor plate
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.49139

Mouse

EmageMGI:1918177
EurexpressMGI:1918177
MGI GXDMGI:1918177

Frog

Xenbase995487

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-2140
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