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SIM2 SIM bHLH transcription factor 2 Gene Summary Expression Other Species Expression JBrowse Gene Official Symbol SIM2 Official Full Name SIM bHLH transcription factor 2 CGNC ID 11985 also known as single-minded homolog 2|single-minded family bHLH transcription factor 2 gene type protein-coding
Genomic Map Sequence Information Gene Expression In Situ Hybridization GEISHA EST Profile
Orthology Gene Ontology Molecular Function Biological Process Cellular Component
Links to other databases
Entry 1 GEISHA Id SIM2.UApcr Data Source GEISHA ISH Analysis Forward cDNA Template Primer CGGCGAAGACAAGGCGGG Reverse cDNA Template Primer AATTAACCCTCACTAAAGGTGATTTTGGCAGCAAGGAGTTAGC cDNA Template Length 1814 Forward cDNA Template Probe show NCCGTTTACTGTGCACGTTCATGCAGGNCTGGNATCGCCAGNTTTCCCACCTGGGCTGCATTCCAGTTTGTCTGTTTGG AATGAGCTGTATTGCTGTTGTGGGTAAGGCGTTGTTCTGAGTTTTGCTTTCATCTTATTACTTTTGGGTTTTACTATTT TCCTTGTTTCCTGCGAGGTAGATACTGAGTTTCTGCATGAAAACTGTGACTTAGAAATGGTAACCTGGTCCAGTGACAG CTGAAGTTCCTTATACTCAATATCTGTAAGGACATAATTGACACTCACTATGCAGTGAGGCCGTGATGAACGGCTGTTA TGCACAATGGTAGCGTAGCTCTGTACCCAAACCCAGCCTCCTTGTTTGGACAGTAGTCGATAGTACTTGGTTGTTACTT GGCCTTTCACCAACAACAGATGATGAGCATATCGTAAATGGAACACATCACAGCCATGAACATGGTGATAGAGCGTTTT TTCTATCAGATCTTGGGGTTCATATCCAGTTAATTCAGTCACTCTGGAATCTAGGAATATTAACTTCAAGTCCAAACTT GCTCTGAACATAAACATGTTACTATGAAGTTTGATCTCAGTGATTGCACTAGGGGGTAAAGATTGACCTACAGCCACCA GTCCAACAATTTGGTAACAGGAATCATACAAAGACATATCGAGCATATACTGCCGTATCTTCAAATAGCCACTGCAGTG GATCACCTTGTAGCCACTGCATGTCAATCCTGCATTCCTCTTGGCTAGGACACACTTCATTCTCAGGAAAAATGATCTC TCAATTTCATATTCTTGTAAGAGGTGAGGATGAAGAGGCTGGTGAGCAGTAAGAACAGCCGTCATCTCATCGTGGTCGG AAGGGTGTATATACTCATAAATGCTATTACCAGTAAGCTCCACCTGAATAAACCCAAGAAAA
Entry 2 GEISHA Id SIM2.Caqueret.2005 Data Source Publication Complete cDNA Template Probe show ATGAAGGAAAAATCCAAGAACGCGGCGAAGACAAGGCGGGAAAAGGAAAATGGAGAGTTCTACGAACTGGCCAAGCTCC TGCCGCTGCCCTCGGCCATCACCTCGCAGCTGGACAAGGCGTCCATCATCCGCCTCACCACCAGCTATCTGAAGATGCG AGCCGTCTTCCCCGAAGGTCTGGGCGACGCCTGGGGACAGCCGAGCAGGATAGGGCCCTTGGATAACGTGGCCAAGGAG CTCGGATCCCACTTGCTTCAGACTTTGGATGGCTTTGTTTTTGTGGTAGCATCAGATGGCAAAATAATGTACATCTCAG AAACAGCGTCTGTACATCTTGGCTTATCTCAGGTGGAGCTTACTGGTAATAGCATTTATGAGTATATACACCCTTCCGA CCACGATGAGATGACGGCTGTTCTTACTGCTCACCAGCCTCTTCATCCTCACCTCTTACAAGAATATGAAATTGAGAGA TCATTTTTCCTGAGAATGAAGTGTGTCCTAGCCAAGAGGAATGCAGGATTGACGTGCAGTGGCTACAAGGTGATCCACT GCAGTGGCTATTTGAAGATACGGCAGTATATGCTCGATATGTCTTTGTATGATTCCTGTTACCAAATTGTTGGACTGGT GGCTGTAGGTCAATCTTTACCCCCTAGTGCAATCACTGAGATCAAACTTCATAGTAACATGTTTATGTTCAGAGCAAGT TTGGACTTGAAGTTAATATTCCTAGATTCCAGAGTGACTGAATTAACTGGATATGAACCCCAAGATCTGATAGAAAAAA CGCTCTATCACCATGTTCATGGCTGTGATGTGTTCCATTTACGATATGCTCATCATCTGTTGTTGGTGAAAGGCCAAGT AACAACCAAGTACTATCGACTACTGTCCAAACAAGGAGGCTGGGTTTGGGTACAGAGCTACGCTACCATTGTGCATAAC AGCCGTTCATCACGGCCTCACTGCATAGTGAGTGTCAATTATGTCCTTACAGATATTGAGTATAAGGAACTTCAGCTGT CACTGGACCAGGTTACCATTTCTAAGTCACAGTTTTCATGCAGAAACTCAGTATCTACCTCGCAGGAAACAAGGAAAAT AGTAAAACCCAAAAGTAATAAGATGAAAGCAAAACTCAGAACAACGCCTTACCCACAACAGCAATACAGCTCATTCCAA ACAGACAAACTGGAATGCAGCCAGGTGGGAAACTGGCGATCCAGCCCTGCAGTGAACGCTGCCACCATTCAAGAACAAA ACTTTCATTCAGAAAACAGTGAACTTTTATATGCCCCGTCATATAGCTTGCCTTTCTCTTACCATTATGGACACTTCCC TGTAGACTCTCATGTCTTCAGCAGCAAAAAGCAAATGCTGCCTCCTAAGTTTGGGCAGTCTCAAGGAGCACCTTGTGAA GTGGCTCGATTTTTCTTGAGTACGCTGCAGACAAATGGAGAATGCCAGTGGCATTACGCCAACTCCTTGGTACCCAACA GCCAGTCACCATCCAAAAATCTTCCTGAGCAGCCAGTGAACATCATCCGACATAATCTTGGACAGAGTTATGAAGCAGA CAAGCGATTTACCACTGATGCTCTCTCCGACAACTTTACAAGTTGCACAGCACCCATGCCAGGCAGCAGATACAAAGAA GAGATTTATGATTCCAGCATCATGAAAACCAACAAAATGGAAAACAGGATTCAGCCACCTCACCATCTCATTAAAGAAG AAAACAAGCTAGCTTTTAACAGAGACCTACAAGAAAAAATGAGCATTAATGAGAGTTCTTTTTCAAACTCAGTTGCTAA CTCCTTGCTGCCAAAATCAGAATGTTTCCAGTCTAAAGCTTTAGGACAATTAAGCCATCTCCTACCCGTGCCCACAGTG TATGAACAAACAAGACGGATTTGTATGAAGGAACCCAAATATGGGCATATTAGTCACCACGCTACAAGCCTAAATGAAC TGGACAGTGATGAGAGGATGACTGTAAAGCTTGATCACGACTCTGAGAGTGAGCGCGTGATGGATGTAAGACCCTCTGG ACAAGTTCCATTTGTGCTTCTAAATTATCATCATGTTTTAGCCAAACATGGCACATTTCAAACTTCATCATGTACAGCA ACGGGACACGTAGGAGAAAATTATGGATACAATTCTGAGGAAGTAAATACGTTTATGTACAAAAACCAAAGCCCCTCAT CAGCCTCTTCTCCAGAAACCCACAAGGAAACGACACTACCCCATTATATTGGAACTTCTGTAATAATAGCCAATGGAAG GTGA
Citation Caqueret A, Coumailleau P, Michaud JL. Regionalization of the anterior hypothalamus in the chick embryo. Dev Dyn. 2005 Jun;233(2):652-8. Copyright Copyright © 2005 Wiley-Liss, Inc.
Entry 3 GEISHA Id SIM2.Havis.2012 Data Source Publication Complete cDNA Template Probe show ATGAAGGAAAAATCCAAGAACGCGGCGAAGACAAGGCGGGAAAAGGAAAATGGAGAGTTCTACGAACTGGCCAAGCTCC TGCCGCTGCCCTCGGCCATCACCTCGCAGCTGGACAAGGCGTCCATCATCCGCCTCACCACCAGCTATCTGAAGATGCG AGCCGTCTTCCCCGAAGGTCTGGGCGACGCCTGGGGACAGCCGAGCAGGATAGGGCCCTTGGATAACGTGGCCAAGGAG CTCGGATCCCACTTGCTTCAGACTTTGGATGGCTTTGTTTTTGTGGTAGCATCAGATGGCAAAATAATGTACATCTCAG AAACAGCGTCTGTACATCTTGGCTTATCTCAGGTGGAGCTTACTGGTAATAGCATTTATGAGTATATACACCCTTCCGA CCACGATGAGATGACGGCTGTTCTTACTGCTCACCAGCCTCTTCATCCTCACCTCTTACAAGAATATGAAATTGAGAGA TCATTTTTCCTGAGAATGAAGTGTGTCCTAGCCAAGAGGAATGCAGGATTGACGTGCAGTGGCTACAAGGTGATCCACT GCAGTGGCTATTTGAAGATACGGCAGTATATGCTCGATATGTCTTTGTATGATTCCTGTTACCAAATTGTTGGACTGGT GGCTGTAGGTCAATCTTTACCCCCTAGTGCAATCACTGAGATCAAACTTCATAGTAACATGTTTATGTTCAGAGCAAGT TTGGACTTGAAGTTAATATTCCTAGATTCCAGAGTGACTGAATTAACTGGATATGAACCCCAAGATCTGATAGAAAAAA CGCTCTATCACCATGTTCATGGCTGTGATGTGTTCCATTTACGATATGCTCATCATCTGTTGTTGGTGAAAGGCCAAGT AACAACCAAGTACTATCGACTACTGTCCAAACAAGGAGGCTGGGTTTGGGTACAGAGCTACGCTACCATTGTGCATAAC AGCCGTTCATCACGGCCTCACTGCATAGTGAGTGTCAATTATGTCCTTACAGATATTGAGTATAAGGAACTTCAGCTGT CACTGGACCAGGTTACCATTTCTAAGTCACAGTTTTCATGCAGAAACTCAGTATCTACCTCGCAGGAAACAAGGAAAAT AGTAAAACCCAAAAGTAATAAGATGAAAGCAAAACTCAGAACAACGCCTTACCCACAACAGCAATACAGCTCATTCCAA ACAGACAAACTGGAATGCAGCCAGGTGGGAAACTGGCGATCCAGCCCTGCAGTGAACGCTGCCACCATTCAAGAACAAA ACTTTCATTCAGAAAACAGTGAACTTTTATATGCCCCGTCATATAGCTTGCCTTTCTCTTACCATTATGGACACTTCCC TGTAGACTCTCATGTCTTCAGCAGCAAAAAGCAAATGCTGCCTCCTAAGTTTGGGCAGTCTCAAGGAGCACCTTGTGAA GTGGCTCGATTTTTCTTGAGTACGCTGCAGACAAATGGAGAATGCCAGTGGCATTACGCCAACTCCTTGGTACCCAACA GCCAGTCACCATCCAAAAATCTTCCTGAGCAGCCAGTGAACATCATCCGACATAATCTTGGACAGAGTTATGAAGCAGA CAAGCGATTTACCACTGATGCTCTCTCCGACAACTTTACAAGTTGCACAGCACCCATGCCAGGCAGCAGATACAAAGAA GAGATTTATGATTCCAGCATCATGAAAACCAACAAAATGGAAAACAGGATTCAGCCACCTCACCATCTCATTAAAGAAG AAAACAAGCTAGCTTTTAACAGAGACCTACAAGAAAAAATGAGCATTAATGAGAGTTCTTTTTCAAACTCAGTTGCTAA CTCCTTGCTGCCAAAATCAGAATGTTTCCAGTCTAAAGCTTTAGGACAATTAAGCCATCTCCTACCCGTGCCCACAGTG TATGAACAAACAAGACGGATTTGTATGAAGGAACCCAAATATGGGCATATTAGTCACCACGCTACAAGCCTAAATGAAC TGGACAGTGATGAGAGGATGACTGTAAAGCTTGATCACGACTCTGAGAGTGAGCGCGTGATGGATGTAAGACCCTCTGG ACAAGTTCCATTTGTGCTTCTAAATTATCATCATGTTTTAGCCAAACATGGCACATTTCAAACTTCATCATGTACAGCA ACGGGACACGTAGGAGAAAATTATGGATACAATTCTGAGGAAGTAAATACGTTTATGTACAAAAACCAAAGCCCCTCAT CAGCCTCTTCTCCAGAAACCCACAAGGAAACGACACTACCCCATTATATTGGAACTTCTGTAATAATAGCCAATGGAAG GTGA
Citation Havis E, Coumailleau P, Bonnet A, Bismuth K, Bonnin MA, Johnson R, Fan CM, Relaix F, Shi DL, Duprez D. Sim2 prevents entry into the myogenic program by repressing MyoD transcription during limb embryonic myogenesis. Development. 2012 Jun;139(11):1910-20. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # XM_416724.3).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24 stage 22
stage 22
stage 22
stage 22
stage 22
stage 22
stage 22
stage 22
Limb Buds Wing 25-30 stage 26
stage 26
stage 29
stage 29
Limb Buds Wing 31-36 stage 36
stage 36
Wing
Mouse Frog Fruit Fly Zebra Finch Zebrafish