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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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SIX2
SIX homeobox 2

Gene

Official Symbol	SIX2
Official Full Name	SIX homeobox 2
CGNC ID	54367
also known as	homeobox protein SIX2\|sine oculis homeobox homolog 2\|sine oculis-related homeobox 2
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001044695
Polypeptide	NP_001038160
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.23686

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	724086
Ensembl Gene
KEGG	gga:724086

Entry 1

GEISHA Id	SIX2.Smith.2000	Data Source	Publication
Complete cDNA Template Probe	show GGGGGCCGCTGCCCGCCGCCCCACCGAGCGGCCGTAGGGTGCGCGGCGGGGCAGGGCTCACCATGTCGATGCTCCCGAC TTTTGGCTTCACCCAAGAGCAAGTGGCTTGCGTCTGCGAGGTGCTCCAGCAAGGCGGCAACATCGAGCGGCTGGGGCGG TTCCTCTGGTCCCTCCCTGCGTGCGAGCACCTCCACAAAAACGAGAGCGTCCTGAAGGCCAAGGCCGTGGTGGCCTTCC ATCGGGGCAACTTCCGAGAGCTCTACAAGATCCTGGAGAGCCACCAGTTCTCGGCGCACAACCACCCCAAGCTGCAGCA GCTCTGGCTCAAGGCGCACTACATCGAGGCGGAGAAGCTGCGGGGGCGACCCCTAGGGGCGGTGGGCAAGTACCGGGTG CGCCGCAAGTTCCCGCTGCCCCGCTCCATCTGGGACGGCGAGGAGACCAGCTACTGCTTCAAGGAGAAGAGCCGCAGCG TCCTCCGCGAGTGGTACGCGCACAATCCCTACCCGTCCCCCCGTGAGAAGCGGGAGCTGGCCGAGGCCACCGGCCTCAC CACCACGCAGGTCAGCAACTGGTTCAAGAACCGCCGGCAGCGGGACCGAGCGGCCGAGGCCAAGGAAAGGGAAAACAAC GAGAATTCCAACTCCAACAGCCACAACCCGCTCTCGGCGTCAATGAACGGGAATAAGACAGTTCTGGGGAGCTCGGAGG ACGAGAAGACGCCGTCAGGGACCCCGGACCACACCTCCTCCAGCCCCGCTCTGCTGCTCGGCTCCAACCCGGGGCTGCA GCCCCTGCACGGCCTGGGCCACCCGCAGGGCCCCAGCGCCATCCCCGTGCCCAGCACCGACCCCATGCACCACCACAGC TTGCAGGACTCCATCCTCAATCCCATGTCATCCAACCTGGTCGATCTGGGCTCTTAAACCGCTTACACGCTC
Citation	Smith DM, Grasty RC, Theodosiou NA, Tabin CJ, Nascone-Yoder NM. Evolutionary relationships between the amphibian, avian, and mammalian stomachs. Evol Dev. 2000 Nov-Dec;2(6):348-59.
Copyright	Copyright © 2000-2011 by John Wiley & Sons, Inc., or related companies. All rights reserved.
Comments	As insufficient information is provided in publication to verify exact sequence used to syntesize probe, the sequence below was obtained from NCBI (acc. # NM_001044695) Provisional cDNA sequence

Stage

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19-24

stage 24

Gizzard
Splanchnic Mesoderm

gizzard mesoderm, E4.5

Entry 2

GEISHA Id	SIX2.Yamamoto-Shiraishi.2013	Data Source	Publication
Complete cDNA Template Probe	show `TTCCAACTCCAACAGCCACAACCCGCTCTCGGCGTCAATGAACGGGAATAAGACAGTTCTGGGGAGCTCGGAGGACGAG AAGACGCCGTCAGGGACCCCGGACCACACCTCCTCCAGCCCCGCTCTGCTGCTCGGCTCCAACCCGGGGCTGCAGCCCC TGCACGGCCTGGGCCACCCGCAGGGCCCCAGCGCCATCCCCGTGCCCAGCACCGACCCCATGCACCACCACAGCTTGCA GGACTCCATCCTCAATCCCATGTCATCCAACCTGGTCGATCTGGGCTCTTAAACCGCTTACACGCTC`
Citation	Yamamoto-Shiraishi Y, Kuroiwa A. Wnt and BMP signaling cooperate with Hox in the control of Six2 expression in limb tendon precursor. Dev Biol. 2013 May 15;377(2):363-74
Copyright	© Elsevier Inc. All rights reserved
Comments	The complete cDNA template sequence was obtained from the information provided in the publication as described in Yamamoto-Shiraishi et al. 2013.