GEISHA - A Chicken Embryo Gene Expression Database
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SLC8A3
solute carrier family 8 member A3

Gene
Official SymbolSLC8A3
Official Full Namesolute carrier family 8 member A3
CGNC ID7148
also known asNCX3, sodium/calcium exchanger 3|sodium-calcium exchanger|solute carrier family 8 (sodium/calcium exchanger), member 3
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_421178
PolypeptideXP_421178
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.452
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human6547ENSG00000100678MIM:607991
Mouse110893ENSMUSG00000079055All phenotypic alleles (2):Targeted, knock-out(2) MGI:107976
Xenopus100487508, 446366954536
Zebrafish560561ENSDARG00000004931ZDB-GENE-050810-1ZFIN:ZDB-GENE-050810-1
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395759
Ensembl GeneENSGALG00000009400
KEGGgga:395759

Entry 1

GEISHA IdSLC8A3.Anderson.2020Data SourceDirect Submission
Complete cDNA Template Probeshow
CCCAACCACTATGACTGCATAAAGTCTGGACACAGGTTAGATTACTTGTTCAGGATTTGTGTGTTGGAAGCTCACACAA
GGCTGTACTGGTCCTGATTCATATAATCCATCCACTGAGTTGTCCAAACAGTCTGTACTGGTCAGAACAGAGCAATGCT
TCAGCTCCTCTCATCCCTTGTTGTTCTTCTTGCCAGTCACCCAGCTGCCAGGCCAAATGTCCTTATCTGGCAGTGGCAA
GCATGTTCTGCTTTGCCTTGCATCAGTAGCAGCCTACCCAAGCTGGGGCAGAGGGTGTGTCACAGTTGTGCCTGGAAGC
AGGCCCTGAGTATCTCTCCTCATCCTACAAGTCCTCCTGGGCCTCTCCAGCTGTACTTTAAATGACAGCTGAAAACACT
CGTGACAGAGGAGAACCAGGGCTCTACAGTGCAAATCATCTGCTCTTCCTGCCTGAAGCAAAACCATATCCTTTTTTGC
TAACCCTCCAAGGACATGATGTCTTGGAGGGAGTTGCATTACGGTGGGATTCACTCCTATGAAGGCACTGCTTTCCATG
GCCTAAGTTTGTACTGAACTTATCCTGCCCCAGCACATTTCTGCCTATGGCATTGTTCTGTTAGACTGAAAGGCATCTG
TTTGATTCCAGTTCTGTACCTAACAATAGATAACTTTTGCTCCAAACAC
CommentsImages provided by Claire Anderson. Probe sequence is associated with GenBank: BU104016.1 (clone ChEST21m16).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XII
stage XIII
Epiblast
Unlabeled
 
1-3
stage 2
stage 3
Primitive Streak
stage 2+
stage 3+
4-6
stage 4
stage 4
stage 5
stage 6
Early Mesoderm
Epiblast
Primitive Streak
 
7-12
stage 7
stage 8
stage 8
stage 9
stage 10
stage 11
stage 12
stage 12
Epiblast
Forebrain
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Crest
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Pharynx
Primitive Streak
Somites
stage 12+
stage 8+
13-18
stage 13
stage 13
Forebrain
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Crest
Neural Plate/Tube
Notochord
Pharynx
Somites
stage 13+
19-24
stage 21
stage 24
Eye
Foregut
Hindbrain
Leg Mesenchyme
Liver
Lung
Myelencephalon
Nasal Placode/Nerve
Neural Plate/Tube
Pharyngeal Arches and Clefts
Rhombomeres
Somites
Spinal Ganglia and Nerves
Tail
Wing Mesenchyme
 

Entry 2

GEISHA IdSLC8A3.Anderson.2020bData SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GTGGACTGCAAGCTCCCAGCTTCTCAATGCATCTTCTCTTTTTAAAATGCCCAGCACTCACCTTTGTGTGTGGGATGAT
TGGTTTAGTGTATAGTTAGAAATGTTCCTATCTCTGTTATTCCTATGTAGGAGCAAAGAACAAACCGTATAAAAAAAAA
AAAAAAACCCTTTTCCTGGTCTTTATATGCTAGTCTTAGAAAGTAAAAGCTCTGGGCTGCTGGGGTGTATCATGGTAGG
TATGGTGTCTTTTTTCTTACATTTCTTTTGTTTTTAATGGCGATAGTTACATTCCAGCAAACCCAGACAGCGGGATCTC
AACAGGAGCTCTGTCCATCCAGCCACGGGGTCAGGCTGTGCCCCATAGAATGGCAGGGGTGTGCAAAGCGTGCTAGAAA
TGATGGCCATCTATGACATCTGGAAAGTTGCGGGAACATGTGAGTAACACCAGCCAGCCAGCGCAGAAGCCATGTCACA
TAAATATCCTTCTGAGCAGACCTTGTTCTCATCCTGGGATCCTATCGGGTCTAAAAAGGCCTGCACTCACAATGTAGTT
GGCAATTTAAAACCGAGTCCGTGGTCCAAGGGAAATCAAAACAAGGTAAGCTTGGGAATGGGGGGATATCCATGCTAGC
TAAAATAAAGGGGCTAGACTTAACGGGAATGGAAGGGGGCACAAAAGCAATAACTAATAGGGCTACCCCCACTTAACGT
ACCATGGGGAAAGAGAGTCCACACATCCCCATAAATCAACGACGTTGGAGATTGGCACACAGCGCCTCTTAGGCACGCT
ACATGGCCGACATAAAGGACCATTGGCAATGGATTGACCAC
CommentsImages provided by Claire Anderson. Probe sequence was obtained from NCBI GenBank: BU126919.1 (clone ChEST66m21).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XII
stage XIII
Epiblast
 
1-3
stage 2
stage 3
Primitive Streak
stage 2+
stage 3+
4-6
stage 4
stage 4
stage 4
stage 6
Early Mesoderm
Epiblast
Paraxial Mesoderm
Primitive Streak
stage 4+
stage 6+
7-12
stage 8
stage 8
stage 8
stage 9
stage 9
stage 10
stage 11
stage 12
stage 12
Forebrain
Hindbrain
Lateral Plate Mesoderm
Mesencephalon
Midbrain
Neural Crest
Neural Plate/Tube
Notochord
Primitive Streak
Rhombomeres
Somites
extraembryonic mesoderm
stage 11-
stage 12+
stage 8-
13-18
stage 13
stage 13
stage 14
Eye
Forebrain
Head Mesenchyme
Hindbrain
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Pharynx
Rhombomeres
Somites
stage 13+
stage 14-
19-23
stage 22
stage 23
Ear/Otic Placode
Eye
Forebrain
Hindbrain
Leg Mesenchyme
Midbrain
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Somites
Spinal Ganglia and Nerves
Tail
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.452

Mouse

EmageMGI:107976
EurexpressMGI:107976
MGI GXDMGI:107976

Frog

Xenbase954536

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-050810-1
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