GEISHA - A Chicken Embryo Gene Expression Database
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SLIT3
slit guidance ligand 3

Gene
Official SymbolSLIT3
Official Full Nameslit guidance ligand 3
CGNC ID49070
also known asslit homolog 3 protein, Slit3 protein
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001197042
PolypeptideNP_001183971
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.2000
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human6586ENSG00000184347MIM:603745
Mouse20564ENSMUSG00000056427All phenotypic alleles (4):Targeted, other(3) Gene trapped(1) MGI:1315202
Xenopus780195991049
Zebrafish80354ENSDARG00000034268ZDB-GENE-010306-4ZFIN:ZDB-GENE-010306-4
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene374173
Ensembl GeneENSGALG00000001916
KEGGgga:374173

Entry 1

GEISHA IdSlit3.Holmes.2001Data SourcePublication
Complete cDNA Template Probeshow
CCAAACTCTACATTTAGCTCAGAATCCATTTGTGTGCGACTGCCATTTGAAGTGGCTGGCTGATTACCTGCAGGATAAT
CCGATAGAAACCAGCGGCGCTCGATGCAGCAATCCGCGTCGCCTTGCCAACAAACGAATCAGCCAGATCAAGAGCAAGA
AGTTCCGCTGCTCAGGGTCAGAGGATTACAGAAGTAAATTCACTGGGAAGTGTTTCATGGATCTTGTCTGTCCTGAGAA
GTGTCGCTGTGAGGGAACAGTTGTGGACTGCTCCAACCAAAAGCTAACCCGATTACCCAGCCACCTTCCTGAATATACC
ACTGATCTGCGTTTGAATGACAATGACATTTCTGTTTTGGAAGCTATTGGACTCTTCAAGAAATTGCCCAACCTCAGAA
AAATAAATCTGAGCAATAATAAGATCAAGGAGATTCGAGAAGGCACATTTGATGGAGCTTCGGGAGTGCAGGAGCTGAT
TCTGACAGAGAATCAACTGGAATCAGTGCACGGACGAATGTTTAGAGGCCTCACGGGGCTGAAGACACTAATGCTGAGG
AGCAACTCTATCAGCTGCATAAACAATGACACCTTCGCTGGACTGAGCTCAGTGAGGCTTCTTTCTCTGTACGACAATC
ACATCAGCACCATCACACCTGGAGCCTTCAGCACATTAGTCTCTTTGTCTACAATCAATTTGCTGGCTAACTCCTTTAA
TTGTAACTGTCATTTGGCCTGGCTGGGAAAGTGGTTGAGGAAGAAGAGAATTGTCAGTGGAAATCCACGCTGCTTGAAA
CCCTTTTTCTTGAAGGATATTCCAATCCAAGATGTAGATGCCCAGGATTTCACCTGTGAGGGTAATGATGAAAGCAGCT
GCTTGCTTTCTCCTCCCTGTCCTTCCCAGTGTACCTGTGTGGACTCGGTGGTACGTTGCAGCAACAAAGGGCTGCGAGT
AATGCCCAAAGGAATTCCCAAAGATGTGACTGAGCTATACCTGGAAGGGAACCACCTGACTGCTGTGCCGAAGGGACTC
TCTGCCTTCAGGCACCTGACACTGATTGATTTGAGCAACAACAGCATAAGTGTATTGGCCAATTATACCTTCAGCAACA
TGACCCAGTTATCAACACTCATCTTGAGCTACAACAGACTTCGGTGCATTCCAGTCCACGCGTTCAATGGGCTCAGGTC
TCTTAGAGTGCTGACGCTCCACGGGAATGATATTTCCAGTGTTCCCGAAGGTTCATTCAACGACCTGGTGTCCCTGTCC
CATCTGGCTCTAGGTACCAACCCTTTACACTGTGACTGCAACCTCCGCTGGCTTTCCGAGTGGGTGAAGGCAGGGTACA
AAGAGCCAGGAATAGCCCGCTGCAGCGGGCCGGAAGCCATGGTGGACAGGCTGCTGCTCACAACACCAACCCACCACTT
CCAGTGCAAAGAGCCGGTAGATATCAGCGTTGTGTCCAAGTGTAACCCCTGCCTCTCCAATCCATGTAAGAACAATGGG
ACATGCAGCAATGATCCAGTGGAGTTTTATCAGTGCACCTGCCCTTTTGGCTTCAAGGGTCGGGACTGCAGTGTGCCCA
TTAATTCTTGCATTCAAAATCCATGTCAGAATGGAGGGACCTGCCACCTCACCGAGGCAAATAAAGATGGATTCAGCTG
TTCTTGCCCCCTTGGCTATGAGGGGGAGAGGTGTGAAATAAACCCAGATGACTGCGAAGATAATGACTGTGAGAATAAC
TCTACGTGTGTGGATGGGATCAACAACTATGTCTGTCTCTGTCCTCCTAATTACACAGGTGAACTGTGTGATGAGGTGA
TTAACCACTGCATTCCTGAGCTAAATCCATGCCAACATGAGTCCAAATGTGTTCCACTTGACAAAGGATCCAGATGCGA
GTGCTTGCCTGGTTACAGTGGCAAACACTGTGAAATAGATGACGATGACTGTGTGGGCCATAAGTGTCGCCATGGAGCT
GTCTGCGTAGATGCAGTCAATGGCTACACCTGCGTCTGTCCTCAGGGCTTCAGTGGACTTTTCTGTGAAACTCCTCCAC
CGATGGTTCTGCTCCAGACGAGCCCATGTGATAACTACGAGTGTCAGAACGGGGCCCAGTGCATCGTCGCACACCAGGA
GCCCGTCTGCCGCTGTCTTGCTGGCTTTGCTGGGCAGAAGTGTGAGAAGCTCATCACGGTGAACTTTGTTGGGAAGGAT
TCCTATGTGGAGTTGCCATCGGCCAAAATTCGCCCTCAGGCAAACATTTCCCTTCAGGTAGCAACAGACAAGGACAATG
GCATCTTGTTGTACAAAGGAGACAACGATCCTTTGGCTCTGGAGTTGTACCAAGGACATGTGAGGCTCATCTATGACAC
ACTGAATTCTCCACCTACCACAGTATATAGTGTGGAAACAGTAAATGATGGGCAATTTCATAGTGTGGAACTTGTGATG
CTGAATCAAACTCTGAACCTGGTGGTGGACAAGGGGACTCCCAAGAGTCTGGGAAAACTCCAGAAACAGTCTTCTGTCA
GCCTCAACACACCGCTCTACATTGGAGGGATCCCGACCTCTACTGGATTGTCTTCGCTGCGCCAGGGTGCAGATAAGAC
ACCAAATGGCTTTCATGGATGTATTCACGATGTTCGCATCAATAACGAGCTACAGGATTTCAAGGATTTACCACAGCAG
TCGATAGGAGTCCTTCCTGGCTGTAAATCCTGTAACATCTGCAAGCACGGCATTTGCCGATCCCTGGAAAAAACGAGTG
TGGTTTGTGAGTGTCACCCCGGCTGGACGGGCCCCCTGTGTGACCAGGAAATTGGAGACCCATGTCTTAACCACAAGTG
TCTGCATGGGAAGTGCATGGCAGCCAACGTTGCTTACACCTGTAAGTGCATGGAAGGCTACACAGGCACGTACTGTGAC
AAGAAGAACAATTCCTCGAACCCCTGCAGGATTTTGAAATGCAACCATGGGCAGTGTAAGATTTCTGAGCATGGGGAAC
CCTACTGTGAATGTGATCCCAACTATAGCGGAGACCACTGTGACAGAGAGAATCTCTGCCAAGGGGAGATCATTCGAGA
AGTGGTCCGTAAGCAGCAGGGCTACACGACGTGCGTCACCGCCTCCAAAGTGCCCCGCATGGAATGCCACGGCAGCTGC
GGCAGCGGGCAGTGCTGCGTCCCACTGCGGAGCAAAAGGAGGAAATACTTCTTCCAGTGCGTGGATGGCTCCACCTTCA
CAGAGGAACTGGAGAGACACGTGGAGTGCGGCTGCTCAAAATGCTCATAAGCCATCCTCCAGCCCCTCGCCACTTTAAT
CGACTCAGAAGTGCTATCAAAATGGGACCTATTTACTTTCAGAGTGAAGAAGAAAAGAATTATTAAGTATATTGTAAAA
TAAACAAAAAATAGAACTTATTTTTATTATGGAAAGTGACTATTTTCATCTTTTATTATATAAAGTATCACACCACTTT
GGGTATATGTATCATATAGTGAGTTATTTTTACCATGAAGCTTTTTTAACAGTTGT
CitationHolmes G, Niswander L. Expression of slit-2 and slit-3 during chick development. Dev Dyn. 2001 Oct;222(2):301-7.
CopyrightCopyright © 2001 Wiley-Liss, Inc. 2001
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 19
stage 19
stage 19
stage 22
stage 22
stage 22
Cranial Ganglia
Ear/Otic Placcode
Forebrain
Hindbrain
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Surface Ectoderm
Wing Mesenchyme
anterior dorsal midline
branchial arches and clefts,
ectoderm overlying the somite
epibranchial placodes of ganglia VII/VIII and IX,
lateral to the midline in the ventral cephalic fold
motor neurons
otic vesicle
proximal limb mesoderm
ventral cephalic fold
ventral part of the floor plate in the caudal hindbrain
25-30
stage 25
stage 29
stage 30
stage 30
Retina
Wing Mesenchyme
inner periosteal cells
inner periosteal cells of metatarsals
interdigital zones of the hindlimb
intra-metatarsal mesenchyme
mesenchyme radial to the flattened outer perisosteum
pigment layer of retina
proliferating chondrocytes of the metatarsals
subepidermally
tarsals
31-32
stage 32
stage 32
Wing Mesenchyme
inner periosteal cells
interdigitally
interdigitally,
intervening mesenchyme,
mesenchyme radial to the periosteum
periosteal cells along the metatarsals
proliferating chondrocytes of the metatarsals
proliferating chondrocytes of the phalanges
subepidermally
within the phalange of digit 2

Entry 2

GEISHA IdSlit3.Riley.2010Data SourcePublication
Complete cDNA Template Probeshow
ATGTCTGGTGGAAGAAGTGAGTTTCTGTGCCTTGGAATGATCTTGGGCTTTTGGAGCTCCGTGAGTTGGATGCCTGTTG
GAGGCTGCCCGCATAAATGTACGTGCATTGCTTCCAACGTGGATTGTCATGGACTAGGACTCAAAACTGTACCGAGGGA
TATTCCCAGGAATGCTGAGAGACTAAATAACATGAGAAATAATGTTGTGGAAATACCAACATATGAATATGTTGGAAAA
GAAACAATCTTAGTGCTACACTTGGAAGAAAATCAGATCAGTGTGATAGAACGTGGAGCGTTTCAGGATCTAAAGCAAC
TTGAACGACTGCGTCTGAACAAGAACAAATTGCAAGTTCTTCCAGAGCTCCTTTTTCAGAACACGCAGAAGTTAACCAG
ATTAGACCTCAGTGAAAACCAGATAAAAGGAATCCCTAGAAAGGCCTTTCGAGGAATCATTGACGTGAAGAACTTGCAG
CTGGACAACAACCAGATCAGCTGCATCGAGGATGGAGCTTTCCGCGCCCTGCGCGACCTGGAGATCCTTACTCTCAACA
ACAACAACATCACCCGCATTCCTGTTACCAGTTTCAATCACATGCCAAAGATCAGGACTCTGCGGCTGCACTCCAACTT
CCTGCACTGCGACTGCCACCTGGCCTGGCTGTCCGACTGGCTGCGGCAGCGACGCACCATCGGGCAGTTCACCTTCTGC
CTGGCGCCGGTCAGCCTGCGGGGCTTCCTGGTGGCCGAGGTGCAGAAAAAGGACTTCGTCTGCTCTGGTTCCCAATCCG
AACCACCATCATGCAGTGCCAGTTCCATCACTTGCCCTTCTGCCTGCACCTGCAGCAACAATGTAGTGGATTGTCGAGG
AAGGGGCTTAACAGAAATTCCAGCTAACCTACCGGAGGACATTTGGGAAATCCGTTTGGAACAAAACCTCATCAAAGTC
ATTCCCCCTGGAGCTTTTACCCAGTACAAGAAACTTAAGAGAATAGACATCAGCAAGAATCAGATATCTGAAATTGCAC
CGGATGCATTCAAAGGCTTGAAATCTCTCATTTCATTAGTGCTCTATGGAAACAAGATCACAGAGATTCCCCAGGGCCT
TTTTGATGATCTTGTGTCTCTGCAGCTGCTGCTTCTCAATGCCAATAAGATCAACTGTCTGAGGGTAAACACGTTCCAA
GGTCTGCATAATCTCAAACTGCTATCTCTTTATGACAACAAATTGCAGACCATCAGCAAGGGGCTCTTTGCACCTCTCC
GATCGATCCAAACTCTACATTTAGCTCAGAATCCATTTGTGTGCGACTGCCATTTGAAGTGGCTGGCTGATTACCTGCA
GGATAATCCGATAGAAACCAGCGGCGCTCGATGCAGCAATCCGCGTCGCCTTGCCAACAAACGAATCAGCCAGATCAAG
AGCAAGAAGTTCCGCTGCTCAGGGTCAGAGGATTACAGAAGTAAATTCACTGGGAAGTGTTTCATGGATCTTGTCTGTC
CTGAGAAGTGTCGCTGTGAGGGAACAGTTGTGGACTGCTCCAACCAAAAGCTAACCCGATTACCCAGCCACCTTCCTGA
ATATACCACTGATCTGCGTTTGAATGACAATGACATTTCTGTTTTGGAAGCTATTGGACTCTTCAAGAAATTGCCCAAC
CTCAGAAAAATAAATCTGAGCAATAATAAGATCAAGGAGATTCGAGAAGGCACGTTTGATGGAGCTTCGGGAGTGCAGG
AGCTGATTCTGACAGAGAATCAACTGGAATCAGTGCACGGACGAATGTTTAGAGGCCTCACGGGGCTGAAGACACTAAT
GCTGAGGAGCAACTCTATCAGCTGCATAAACAATGACACCTTCGCTGGACTGAGCTCAGTGAGGCTTCTTTCTCTGTAC
GACAATCACATCAGCACCATCACACCTGGAGCCTTCAGCACATTAGTCTCTTTGTCTACAATCAATTTGCTGGCTAACT
CCTTTAATTGTAACTGTCATTTGGCCTGGCTGGGAAAGTGGTTGAGGAAGAAGAGAATTGTCAGTGGAAATCCACGCTG
CTTGAAACCCTTTTTCTTGAAGGATATTCCAATCCAAGATGTAGATGCCCAGGATTTCACCTGTGAGGGTAATGATGAA
AGCAGCTGCTTGCTTTCTCCTCCCTGTCCTTCCCAGTGTACCTGTGTGGACTCGGTGGTACGTTGCAGTAACAAAGGGC
TGCGAGTAATGCCCAAAGGAATTCCCAAAGATGTGACTGAGCTATACCTGGAAGGGAACCACCTGACTGCTGTGCCGAA
GGGACTCTCTGCCTTCAGGCACCTGACACTGATTGATTTGAGCAACAACAGCATAAGTGTATTGGCCAATTATACCTTC
AGCAACATGACCCAGTTATCAACACTCATCTTGAGCTACAACAGACTTCGGTGCATTCCAGTCCACGCGTTCAATGGGC
TCAGGTCTCTTAGAGTGCTGACGCTCCACGGGAATGATATTTCCAGTGTTCCCGAAGGTTCATTCAACGACCTGGTGTC
CCTGTCCCATCTGGCTCTAGGTACCAACCCTTTACACTGTGACTGCAACCTCCGCTGGCTTTCCGAGTGGGTGAAGGCA
GGGTACAAAGAGCCAGGAATAGCCCGCTGCAGCGGGCCGGAAGCCATGGTGGACAGGCTGCTGCTCACAACACCAACCC
ACCACTTCCAGTGCAAAGAGCCGGTAGATATCAGCGTTGTGTCCAAGTGTAACCCCTGCCTCTCCAATCCATGTAAGAA
CAATGGGACATGCAGCAATGATCCAGTGGAGTTTTATCAGTGCACCTGCCCTTTTGGCTTCAAGGGTCGGGACTGCAGT
GTGCCCATTAATTCTTGCATTCAAAATCCATGTCAGAATGGAGGGACCTGCCACCTCACCGAGGCAAATAAAGATGGAT
TCAGCTGTTCTTGCCCCCTTGGCTATGAGGGGGAGAGGTGTGAAATAAACCCAGATGACTGCGAAGATAATGACTGTGA
GAATAACTCTACGTGTGTGGATGGGATCAACAACTATGTCTGTCTCTGTCCTCCTAATTACACAGGTGAACTGTGTGAT
GAGGTGATTAACCACTGCATTCCTGAGCTAAATCCATGCCAACATGAGTCCAAATGTGTTCCACTTGACAAAGGATCCA
GATGCGAGTGCTTGCCTGGTTACAGTGGCAAACACTGTGAAATAGATGACGATGACTGTGTGGGCCATAAGTGTCGCCA
TGGAGCTGTCTGCGTAGATGCAGTCAATGGCTACACCTGCGTCTGTCCTCAGGGCTTCAGTGGACTTTTCTGTGAAACT
CCTCCACCGATGGTTCTGCTCCAGACGAGCCCATGTGATAACTACGAGTGTCAGAACGGGGCCCAGTGCATCGTCGCAC
ACCAGGAGCCCGTCTGCCGCTGTCTTGCTGGCTTTGCTGGGCAAAAGTGTGAGAAGCTCATCACGGTGAACTTTGTTGG
GAAGGATTCCTATGTGGAGTTGCCATCGGCCAAAATTCGCCCTCAGGCAAACATTTCCCTTCAGGTAGCAACAGACAAG
GACAATGGCATCTTGTTGTACAAAGGAGACAACGATCCTTTGGCTCTGGAGTTGTACCAAGGACATGTGAGGCTCATCT
ATGACACACTGAATTCTCCACCTACCACAGTATATAGTGTGGAAACAGTAAATGATGGGCAATTTCATAGTGTGGAACT
TGTGATGCTGAATCAAACTCTGAACCTGGTGGTGGATAAGGGGACTCCCAAGAGTCTGGGAAAACTCCAGAAACAGTCT
TCTGTCAGCCTCAACACACCGCTCTACATTGGAGGGATCCCGACCTCTACTGGATTATCTTCGCTGCGCCAGGGTGCAG
ATAAGACACCAAATGGCTTTCATGGATGTATTCACGATGTTCGCATCAATAACGAGCTACAGGATTTCAAGGATTTACC
ACAGCAGTCGATAGGAGTCCTTCCTGGCTGTAAATCCTGTAACATCTGCAAGCACGGCATTTGCCGATCCCTGGAAAAA
ACGAGTGTGGTTTGTGAGTGTCACCCCGGCTGGACGGGCCCCCTGTGTGACCAGGAAATTGGAGACCCATGTCTTAACC
ACAAGTGTCTGCATGGGAAGTGCATGGCAGCCAACGTTGCTTACACCTGTAAGTGCATGGAAGGCTACACAGGCACGTA
CTGTGACAAGAAGAACAATTCCTCGAACCCCTGCAGGATTTTGAAATGCAACCATGGGCAGTGTAAGATTTCTGAGCAT
GGGGAACCCTACTGTGAATGTGATCCCAACTATAGCGGAGACCACTGTGACAGAGAGAATCTCTGCCAAGGGGAGATCA
TTCGAGAAGTGGTCCGTAAGCAGCAGGGCTACACGACGTGCGTCACCGCCTCCAAAGTGCCCCGCATGGAATGCCACGG
CAGCTGCGGCAGCGGGCAGTGCTGCGTCCCACTGCGGAGCAAAAGGAGGAAATACTTCTTCCAGTGCGTGGATGGCTCC
ACCTTCACAGAGGAACTGGAGAGACACGTGGAGTGCGGCTGCTCAAAATGCTCATAAGCCATCCTCCAGCCCCTCGCCA
CTTTAATCGACTCAGAAGTGCTATCAAAATGGGACCTATTTACTTTCAGAGTGAAGAAGAAAAGAATTATTAAGTATAT
TGTAAAATAAACAAAAAATAGAACTTATTTTTATTATGGAAAGTGACTATTTTCATCTTTTATTATATAAAGTATCACA
CCACTTTGGGTATATGTATCATATAGTGAGTTATTTTTACCATGAAGCTTTTTTAACAGTTGTAA
CitationRiley KL, Gledhill S, Schubert FR. Early expression of axon guidance molecules in the embryonic chick mesencephalon and pretectum. Int J Dev Biol. 2010;54(4):743-53.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc. #NM_001197042.1)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 14
stage 14
stage 18
Midbrain
Unlabeled
 
19-21
stage 21
Midbrain
oculomotor nucleus

Entry 3

GEISHA IdSLIT3.Hasan.2010Data SourcePublication
Complete cDNA Template Probeshow
ATGTCTGGTGGAAGAAGTGAGTTTCTGTGCCTTGGAATGATCTTGGGCTTTTGGAGCTCCGTGAGTTGGATGCCTGTTG
GAGGCTGCCCGCATAAATGTACGTGCATTGCTTCCAACGTGGATTGTCATGGACTAGGACTCAAAACTGTACCGAGGGA
TATTCCCAGGAATGCTGAGAGACTAAATAACATGAGAAATAATGTTGTGGAAATACCAACATATGAATATGTTGGAAAA
GAAACAATCTTAGTGCTACACTTGGAAGAAAATCAGATCAGTGTGATAGAACGTGGAGCGTTTCAGGATCTAAAGCAAC
TTGAACGACTGCGTCTGAACAAGAACAAATTGCAAGTTCTTCCAGAGCTCCTTTTTCAGAACACGCAGAAGTTAACCAG
ATTAGACCTCAGTGAAAACCAGATAAAAGGAATCCCTAGAAAGGCCTTTCGAGGAATCATTGACGTGAAGAACTTGCAG
CTGGACAACAACCAGATCAGCTGCATCGAGGATGGAGCTTTCCGCGCCCTGCGCGACCTGGAGATCCTTACTCTCAACA
ACAACAACATCACCCGCATTCCTGTTACCAGTTTCAATCACATGCCAAAGATCAGGACTCTGCGGCTGCACTCCAACTT
CCTGCACTGCGACTGCCACCTGGCCTGGCTGTCCGACTGGCTGCGGCAGCGACGCACCATCGGGCAGTTCACCTTCTGC
CTGGCGCCGGTCAGCCTGCGGGGCTTCCTGGTGGCCGAGGTGCAGAAAAAGGACTTCGTCTGCTCTGGTTCCCAATCCG
AACCACCATCATGCAGTGCCAGTTCCATCACTTGCCCTTCTGCCTGCACCTGCAGCAACAATGTAGTGGATTGTCGAGG
AAGGGGCTTAACAGAAATTCCAGCTAACCTACCGGAGGACATTTGGGAAATCCGTTTGGAACAAAACCTCATCAAAGTC
ATTCCCCCTGGAGCTTTTACCCAGTACAAGAAACTTAAGAGAATAGACATCAGCAAGAATCAGATATCTGAAATTGCAC
CGGATGCATTCAAAGGCTTGAAATCTCTCATTTCATTAGTGCTCTATGGAAACAAGATCACAGAGATTCCCCAGGGCCT
TTTTGATGATCTTGTGTCTCTGCAGCTGCTGCTTCTCAATGCCAATAAGATCAACTGTCTGAGGGTAAACACGTTCCAA
GGTCTGCATAATCTCAAACTGCTATCTCTTTATGACAACAAATTGCAGACCATCAGCAAGGGGCTCTTTGCACCTCTCC
GATCGATCCAAACTCTACATTTAGCTCAGAATCCATTTGTGTGCGACTGCCATTTGAAGTGGCTGGCTGATTACCTGCA
GGATAATCCGATAGAAACCAGCGGCGCTCGATGCAGCAATCCGCGTCGCCTTGCCAACAAACGAATCAGCCAGATCAAG
AGCAAGAAGTTCCGCTGCTCAGGGTCAGAGGATTACAGAAGTAAATTCACTGGGAAGTGTTTCATGGATCTTGTCTGTC
CTGAGAAGTGTCGCTGTGAGGGAACAGTTGTGGACTGCTCCAACCAAAAGCTAACCCGATTACCCAGCCACCTTCCTGA
ATATACCACTGATCTGCGTTTGAATGACAATGACATTTCTGTTTTGGAAGCTATTGGACTCTTCAAGAAATTGCCCAAC
CTCAGAAAAATAAATCTGAGCAATAATAAGATCAAGGAGATTCGAGAAGGCACGTTTGATGGAGCTTCGGGAGTGCAGG
AGCTGATTCTGACAGAGAATCAACTGGAATCAGTGCACGGACGAATGTTTAGAGGCCTCACGGGGCTGAAGACACTAAT
GCTGAGGAGCAACTCTATCAGCTGCATAAACAATGACACCTTCGCTGGACTGAGCTCAGTGAGGCTTCTTTCTCTGTAC
GACAATCACATCAGCACCATCACACCTGGAGCCTTCAGCACATTAGTCTCTTTGTCTACAATCAATTTGCTGGCTAACT
CCTTTAATTGTAACTGTCATTTGGCCTGGCTGGGAAAGTGGTTGAGGAAGAAGAGAATTGTCAGTGGAAATCCACGCTG
CTTGAAACCCTTTTTCTTGAAGGATATTCCAATCCAAGATGTAGATGCCCAGGATTTCACCTGTGAGGGTAATGATGAA
AGCAGCTGCTTGCTTTCTCCTCCCTGTCCTTCCCAGTGTACCTGTGTGGACTCGGTGGTACGTTGCAGTAACAAAGGGC
TGCGAGTAATGCCCAAAGGAATTCCCAAAGATGTGACTGAGCTATACCTGGAAGGGAACCACCTGACTGCTGTGCCGAA
GGGACTCTCTGCCTTCAGGCACCTGACACTGATTGATTTGAGCAACAACAGCATAAGTGTATTGGCCAATTATACCTTC
AGCAACATGACCCAGTTATCAACACTCATCTTGAGCTACAACAGACTTCGGTGCATTCCAGTCCACGCGTTCAATGGGC
TCAGGTCTCTTAGAGTGCTGACGCTCCACGGGAATGATATTTCCAGTGTTCCCGAAGGTTCATTCAACGACCTGGTGTC
CCTGTCCCATCTGGCTCTAGGTACCAACCCTTTACACTGTGACTGCAACCTCCGCTGGCTTTCCGAGTGGGTGAAGGCA
GGGTACAAAGAGCCAGGAATAGCCCGCTGCAGCGGGCCGGAAGCCATGGTGGACAGGCTGCTGCTCACAACACCAACCC
ACCACTTCCAGTGCAAAGAGCCGGTAGATATCAGCGTTGTGTCCAAGTGTAACCCCTGCCTCTCCAATCCATGTAAGAA
CAATGGGACATGCAGCAATGATCCAGTGGAGTTTTATCAGTGCACCTGCCCTTTTGGCTTCAAGGGTCGGGACTGCAGT
GTGCCCATTAATTCTTGCATTCAAAATCCATGTCAGAATGGAGGGACCTGCCACCTCACCGAGGCAAATAAAGATGGAT
TCAGCTGTTCTTGCCCCCTTGGCTATGAGGGGGAGAGGTGTGAAATAAACCCAGATGACTGCGAAGATAATGACTGTGA
GAATAACTCTACGTGTGTGGATGGGATCAACAACTATGTCTGTCTCTGTCCTCCTAATTACACAGGTGAACTGTGTGAT
GAGGTGATTAACCACTGCATTCCTGAGCTAAATCCATGCCAACATGAGTCCAAATGTGTTCCACTTGACAAAGGATCCA
GATGCGAGTGCTTGCCTGGTTACAGTGGCAAACACTGTGAAATAGATGACGATGACTGTGTGGGCCATAAGTGTCGCCA
TGGAGCTGTCTGCGTAGATGCAGTCAATGGCTACACCTGCGTCTGTCCTCAGGGCTTCAGTGGACTTTTCTGTGAAACT
CCTCCACCGATGGTTCTGCTCCAGACGAGCCCATGTGATAACTACGAGTGTCAGAACGGGGCCCAGTGCATCGTCGCAC
ACCAGGAGCCCGTCTGCCGCTGTCTTGCTGGCTTTGCTGGGCAAAAGTGTGAGAAGCTCATCACGGTGAACTTTGTTGG
GAAGGATTCCTATGTGGAGTTGCCATCGGCCAAAATTCGCCCTCAGGCAAACATTTCCCTTCAGGTAGCAACAGACAAG
GACAATGGCATCTTGTTGTACAAAGGAGACAACGATCCTTTGGCTCTGGAGTTGTACCAAGGACATGTGAGGCTCATCT
ATGACACACTGAATTCTCCACCTACCACAGTATATAGTGTGGAAACAGTAAATGATGGGCAATTTCATAGTGTGGAACT
TGTGATGCTGAATCAAACTCTGAACCTGGTGGTGGATAAGGGGACTCCCAAGAGTCTGGGAAAACTCCAGAAACAGTCT
TCTGTCAGCCTCAACACACCGCTCTACATTGGAGGGATCCCGACCTCTACTGGATTATCTTCGCTGCGCCAGGGTGCAG
ATAAGACACCAAATGGCTTTCATGGATGTATTCACGATGTTCGCATCAATAACGAGCTACAGGATTTCAAGGATTTACC
ACAGCAGTCGATAGGAGTCCTTCCTGGCTGTAAATCCTGTAACATCTGCAAGCACGGCATTTGCCGATCCCTGGAAAAA
ACGAGTGTGGTTTGTGAGTGTCACCCCGGCTGGACGGGCCCCCTGTGTGACCAGGAAATTGGAGACCCATGTCTTAACC
ACAAGTGTCTGCATGGGAAGTGCATGGCAGCCAACGTTGCTTACACCTGTAAGTGCATGGAAGGCTACACAGGCACGTA
CTGTGACAAGAAGAACAATTCCTCGAACCCCTGCAGGATTTTGAAATGCAACCATGGGCAGTGTAAGATTTCTGAGCAT
GGGGAACCCTACTGTGAATGTGATCCCAACTATAGCGGAGACCACTGTGACAGAGAGAATCTCTGCCAAGGGGAGATCA
TTCGAGAAGTGGTCCGTAAGCAGCAGGGCTACACGACGTGCGTCACCGCCTCCAAAGTGCCCCGCATGGAATGCCACGG
CAGCTGCGGCAGCGGGCAGTGCTGCGTCCCACTGCGGAGCAAAAGGAGGAAATACTTCTTCCAGTGCGTGGATGGCTCC
ACCTTCACAGAGGAACTGGAGAGACACGTGGAGTGCGGCTGCTCAAAATGCTCATAAGCCATCCTCCAGCCCCTCGCCA
CTTTAATCGACTCAGAAGTGCTATCAAAATGGGACCTATTTACTTTCAGAGTGAAGAAGAAAAGAATTATTAAGTATAT
TGTAAAATAAACAAAAAATAGAACTTATTTTTATTATGGAAAGTGACTATTTTCATCTTTTATTATATAAAGTATCACA
CCACTTTGGGTATATGTATCATATAGTGAGTTATTTTTACCATGAAGCTTTTTTAACAGTTGTAA
CitationHasan KB, Agarwala S, Ragsdale CW. PHOX2A regulation of oculomotor complex nucleogenesis. Development. 2010 Apr;137(7):1205-13.
CopyrightPublished by The Company of Biologists 2007. This material is protected by a copyright retained by the authors. Permission granted by Dr. Ragsdale.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_001197042.1). Normal expression is shown on the left of the photo.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-5
stage 5
stage 5
Midbrain
 

Entry 4

GEISHA IdSLIT3.Battisti.2008Data SourcePublication
Complete cDNA Template Probeshow
ATGTCTGGTGGAAGAAGTGAGTTTCTGTGCCTTGGAATGATCTTGGGCTTTTGGAGCTCCGTGAGTTGGATGCCTGTTG
GAGGCTGCCCGCATAAATGTACGTGCATTGCTTCCAACGTGGATTGTCATGGACTAGGACTCAAAACTGTACCGAGGGA
TATTCCCAGGAATGCTGAGAGACTAAATAACATGAGAAATAATGTTGTGGAAATACCAACATATGAATATGTTGGAAAA
GAAACAATCTTAGTGCTACACTTGGAAGAAAATCAGATCAGTGTGATAGAACGTGGAGCGTTTCAGGATCTAAAGCAAC
TTGAACGACTGCGTCTGAACAAGAACAAATTGCAAGTTCTTCCAGAGCTCCTTTTTCAGAACACGCAGAAGTTAACCAG
ATTAGACCTCAGTGAAAACCAGATAAAAGGAATCCCTAGAAAGGCCTTTCGAGGAATCATTGACGTGAAGAACTTGCAG
CTGGACAACAACCAGATCAGCTGCATCGAGGATGGAGCTTTCCGCGCCCTGCGCGACCTGGAGATCCTTACTCTCAACA
ACAACAACATCACCCGCATTCCTGTTACCAGTTTCAATCACATGCCAAAGATCAGGACTCTGCGGCTGCACTCCAACTT
CCTGCACTGCGACTGCCACCTGGCCTGGCTGTCCGACTGGCTGCGGCAGCGACGCACCATCGGGCAGTTCACCTTCTGC
CTGGCGCCGGTCAGCCTGCGGGGCTTCCTGGTGGCCGAGGTGCAGAAAAAGGACTTCGTCTGCTCTGGTTCCCAATCCG
AACCACCATCATGCAGTGCCAGTTCCATCACTTGCCCTTCTGCCTGCACCTGCAGCAACAATGTAGTGGATTGTCGAGG
AAGGGGCTTAACAGAAATTCCAGCTAACCTACCGGAGGACATTTGGGAAATCCGTTTGGAACAAAACCTCATCAAAGTC
ATTCCCCCTGGAGCTTTTACCCAGTACAAGAAACTTAAGAGAATAGACATCAGCAAGAATCAGATATCTGAAATTGCAC
CGGATGCATTCAAAGGCTTGAAATCTCTCATTTCATTAGTGCTCTATGGAAACAAGATCACAGAGATTCCCCAGGGCCT
TTTTGATGATCTTGTGTCTCTGCAGCTGCTGCTTCTCAATGCCAATAAGATCAACTGTCTGAGGGTAAACACGTTCCAA
GGTCTGCATAATCTCAAACTGCTATCTCTTTATGACAACAAATTGCAGACCATCAGCAAGGGGCTCTTTGCACCTCTCC
GATCGATCCAAACTCTACATTTAGCTCAGAATCCATTTGTGTGCGACTGCCATTTGAAGTGGCTGGCTGATTACCTGCA
GGATAATCCGATAGAAACCAGCGGCGCTCGATGCAGCAATCCGCGTCGCCTTGCCAACAAACGAATCAGCCAGATCAAG
AGCAAGAAGTTCCGCTGCTCAGGGTCAGAGGATTACAGAAGTAAATTCACTGGGAAGTGTTTCATGGATCTTGTCTGTC
CTGAGAAGTGTCGCTGTGAGGGAACAGTTGTGGACTGCTCCAACCAAAAGCTAACCCGATTACCCAGCCACCTTCCTGA
ATATACCACTGATCTGCGTTTGAATGACAATGACATTTCTGTTTTGGAAGCTATTGGACTCTTCAAGAAATTGCCCAAC
CTCAGAAAAATAAATCTGAGCAATAATAAGATCAAGGAGATTCGAGAAGGCACGTTTGATGGAGCTTCGGGAGTGCAGG
AGCTGATTCTGACAGAGAATCAACTGGAATCAGTGCACGGACGAATGTTTAGAGGCCTCACGGGGCTGAAGACACTAAT
GCTGAGGAGCAACTCTATCAGCTGCATAAACAATGACACCTTCGCTGGACTGAGCTCAGTGAGGCTTCTTTCTCTGTAC
GACAATCACATCAGCACCATCACACCTGGAGCCTTCAGCACATTAGTCTCTTTGTCTACAATCAATTTGCTGGCTAACT
CCTTTAATTGTAACTGTCATTTGGCCTGGCTGGGAAAGTGGTTGAGGAAGAAGAGAATTGTCAGTGGAAATCCACGCTG
CTTGAAACCCTTTTTCTTGAAGGATATTCCAATCCAAGATGTAGATGCCCAGGATTTCACCTGTGAGGGTAATGATGAA
AGCAGCTGCTTGCTTTCTCCTCCCTGTCCTTCCCAGTGTACCTGTGTGGACTCGGTGGTACGTTGCAGTAACAAAGGGC
TGCGAGTAATGCCCAAAGGAATTCCCAAAGATGTGACTGAGCTATACCTGGAAGGGAACCACCTGACTGCTGTGCCGAA
GGGACTCTCTGCCTTCAGGCACCTGACACTGATTGATTTGAGCAACAACAGCATAAGTGTATTGGCCAATTATACCTTC
AGCAACATGACCCAGTTATCAACACTCATCTTGAGCTACAACAGACTTCGGTGCATTCCAGTCCACGCGTTCAATGGGC
TCAGGTCTCTTAGAGTGCTGACGCTCCACGGGAATGATATTTCCAGTGTTCCCGAAGGTTCATTCAACGACCTGGTGTC
CCTGTCCCATCTGGCTCTAGGTACCAACCCTTTACACTGTGACTGCAACCTCCGCTGGCTTTCCGAGTGGGTGAAGGCA
GGGTACAAAGAGCCAGGAATAGCCCGCTGCAGCGGGCCGGAAGCCATGGTGGACAGGCTGCTGCTCACAACACCAACCC
ACCACTTCCAGTGCAAAGAGCCGGTAGATATCAGCGTTGTGTCCAAGTGTAACCCCTGCCTCTCCAATCCATGTAAGAA
CAATGGGACATGCAGCAATGATCCAGTGGAGTTTTATCAGTGCACCTGCCCTTTTGGCTTCAAGGGTCGGGACTGCAGT
GTGCCCATTAATTCTTGCATTCAAAATCCATGTCAGAATGGAGGGACCTGCCACCTCACCGAGGCAAATAAAGATGGAT
TCAGCTGTTCTTGCCCCCTTGGCTATGAGGGGGAGAGGTGTGAAATAAACCCAGATGACTGCGAAGATAATGACTGTGA
GAATAACTCTACGTGTGTGGATGGGATCAACAACTATGTCTGTCTCTGTCCTCCTAATTACACAGGTGAACTGTGTGAT
GAGGTGATTAACCACTGCATTCCTGAGCTAAATCCATGCCAACATGAGTCCAAATGTGTTCCACTTGACAAAGGATCCA
GATGCGAGTGCTTGCCTGGTTACAGTGGCAAACACTGTGAAATAGATGACGATGACTGTGTGGGCCATAAGTGTCGCCA
TGGAGCTGTCTGCGTAGATGCAGTCAATGGCTACACCTGCGTCTGTCCTCAGGGCTTCAGTGGACTTTTCTGTGAAACT
CCTCCACCGATGGTTCTGCTCCAGACGAGCCCATGTGATAACTACGAGTGTCAGAACGGGGCCCAGTGCATCGTCGCAC
ACCAGGAGCCCGTCTGCCGCTGTCTTGCTGGCTTTGCTGGGCAAAAGTGTGAGAAGCTCATCACGGTGAACTTTGTTGG
GAAGGATTCCTATGTGGAGTTGCCATCGGCCAAAATTCGCCCTCAGGCAAACATTTCCCTTCAGGTAGCAACAGACAAG
GACAATGGCATCTTGTTGTACAAAGGAGACAACGATCCTTTGGCTCTGGAGTTGTACCAAGGACATGTGAGGCTCATCT
ATGACACACTGAATTCTCCACCTACCACAGTATATAGTGTGGAAACAGTAAATGATGGGCAATTTCATAGTGTGGAACT
TGTGATGCTGAATCAAACTCTGAACCTGGTGGTGGATAAGGGGACTCCCAAGAGTCTGGGAAAACTCCAGAAACAGTCT
TCTGTCAGCCTCAACACACCGCTCTACATTGGAGGGATCCCGACCTCTACTGGATTATCTTCGCTGCGCCAGGGTGCAG
ATAAGACACCAAATGGCTTTCATGGATGTATTCACGATGTTCGCATCAATAACGAGCTACAGGATTTCAAGGATTTACC
ACAGCAGTCGATAGGAGTCCTTCCTGGCTGTAAATCCTGTAACATCTGCAAGCACGGCATTTGCCGATCCCTGGAAAAA
ACGAGTGTGGTTTGTGAGTGTCACCCCGGCTGGACGGGCCCCCTGTGTGACCAGGAAATTGGAGACCCATGTCTTAACC
ACAAGTGTCTGCATGGGAAGTGCATGGCAGCCAACGTTGCTTACACCTGTAAGTGCATGGAAGGCTACACAGGCACGTA
CTGTGACAAGAAGAACAATTCCTCGAACCCCTGCAGGATTTTGAAATGCAACCATGGGCAGTGTAAGATTTCTGAGCAT
GGGGAACCCTACTGTGAATGTGATCCCAACTATAGCGGAGACCACTGTGACAGAGAGAATCTCTGCCAAGGGGAGATCA
TTCGAGAAGTGGTCCGTAAGCAGCAGGGCTACACGACGTGCGTCACCGCCTCCAAAGTGCCCCGCATGGAATGCCACGG
CAGCTGCGGCAGCGGGCAGTGCTGCGTCCCACTGCGGAGCAAAAGGAGGAAATACTTCTTCCAGTGCGTGGATGGCTCC
ACCTTCACAGAGGAACTGGAGAGACACGTGGAGTGCGGCTGCTCAAAATGCTCATAAGCCATCCTCCAGCCCCTCGCCA
CTTTAATCGACTCAGAAGTGCTATCAAAATGGGACCTATTTACTTTCAGAGTGAAGAAGAAAAGAATTATTAAGTATAT
TGTAAAATAAACAAAAAATAGAACTTATTTTTATTATGGAAAGTGACTATTTTCATCTTTTATTATATAAAGTATCACA
CCACTTTGGGTATATGTATCATATAGTGAGTTATTTTTACCATGAAGCTTTTTTAACAGTTGTAA
CitationBattisti AC, Fekete DM. Slits and Robos in the developing chicken inner ear. Dev Dyn. 2008 Feb;237(2):476-84.
CopyrightCopyright © 2008 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_001197042.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 14
stage 14
stage 17
Ear/Otic Placode
 
19-24
stage 23
Ear/Otic Placode
 
25-30
stage 27
Ear/Otic Placode
 
31-32
stage 32
Ear/Otic Placode
 

Entry 5

GEISHA IdSLIT3.Schwend.2012Data SourcePublication
Complete cDNA Template Probeshow
CTCTGAACCTGGTGGTGGATAAGGGGACTCCCAAGAGTCTGGGAAAACTCCAGAAACAGTCTTCTGTCAGCCTCAACAC
ACCGCTCTACATTGGAGGGATCCCGACCTCTACTGGATTATCTTCGCTGCGCCAGGGTGCAGATAAGACACCAAATGGC
TTTCATGGATGTATTCACGATGTTCGCATCAAT
CitationSchwend T, Lwigale PY, Conrad GW. Nerve repulsion by the lens and cornea during cornea innervation is dependent on Robo-Slit signaling and diminishes with neuron age. Dev Biol. 2012 Mar 1;363(1):115-27.
CopyrightCopyright © 2011 Elsevier Inc. All rights reserved.
CommentsThe cDNA template used to generate the probe was obtained by PCR as described in the paper.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 27
stage 27
stage 27
Eye
Lens
 
31-36
stage 36
stage 36
Eye
 

Entry 6

GEISHA IdSLIT3.Giovannone.2012Data SourcePublication
Complete cDNA Template Probeshow
ATGTCTGGTGGAAGAAGTGAGTTTCTGTGCCTTGGAATGATCTTGGGCTTTTGGAGCTCCGTGAGTTGGATGCCTGTTG
GAGGCTGCCCGCATAAATGTACGTGCATTGCTTCCAACGTGGATTGTCATGGACTAGGACTCAAAACTGTACCGAGGGA
TATTCCCAGGAATGCTGAGAGACTAAATAACATGAGAAATAATGTTGTGGAAATACCAACATATGAATATGTTGGAAAA
GAAACAATCTTAGTGCTACACTTGGAAGAAAATCAGATCAGTGTGATAGAACGTGGAGCGTTTCAGGATCTAAAGCAAC
TTGAACGACTGCGTCTGAACAAGAACAAATTGCAAGTTCTTCCAGAGCTCCTTTTTCAGAACACGCAGAAGTTAACCAG
ATTAGACCTCAGTGAAAACCAGATAAAAGGAATCCCTAGAAAGGCCTTTCGAGGAATCATTGACGTGAAGAACTTGCAG
CTGGACAACAACCAGATCAGCTGCATCGAGGATGGAGCTTTCCGCGCCCTGCGCGACCTGGAGATCCTTACTCTCAACA
ACAACAACATCACCCGCATTCCTGTTACCAGTTTCAATCACATGCCAAAGATCAGGACTCTGCGGCTGCACTCCAACTT
CCTGCACTGCGACTGCCACCTGGCCTGGCTGTCCGACTGGCTGCGGCAGCGACGCACCATCGGGCAGTTCACCTTCTGC
CTGGCGCCGGTCAGCCTGCGGGGCTTCCTGGTGGCCGAGGTGCAGAAAAAGGACTTCGTCTGCTCTGGTTCCCAATCCG
AACCACCATCATGCAGTGCCAGTTCCATCACTTGCCCTTCTGCCTGCACCTGCAGCAACAATGTAGTGGATTGTCGAGG
AAGGGGCTTAACAGAAATTCCAGCTAACCTACCGGAGGACATTTGGGAAATCCGTTTGGAACAAAACCTCATCAAAGTC
ATTCCCCCTGGAGCTTTTACCCAGTACAAGAAACTTAAGAGAATAGACATCAGCAAGAATCAGATATCTGAAATTGCAC
CGGATGCATTCAAAGGCTTGAAATCTCTCATTTCATTAGTGCTCTATGGAAACAAGATCACAGAGATTCCCCAGGGCCT
TTTTGATGATCTTGTGTCTCTGCAGCTGCTGCTTCTCAATGCCAATAAGATCAACTGTCTGAGGGTAAACACGTTCCAA
GGTCTGCATAATCTCAAACTGCTATCTCTTTATGACAACAAATTGCAGACCATCAGCAAGGGGCTCTTTGCACCTCTCC
GATCGATCCAAACTCTACATTTAGCTCAGAATCCATTTGTGTGCGACTGCCATTTGAAGTGGCTGGCTGATTACCTGCA
GGATAATCCGATAGAAACCAGCGGCGCTCGATGCAGCAATCCGCGTCGCCTTGCCAACAAACGAATCAGCCAGATCAAG
AGCAAGAAGTTCCGCTGCTCAGGGTCAGAGGATTACAGAAGTAAATTCACTGGGAAGTGTTTCATGGATCTTGTCTGTC
CTGAGAAGTGTCGCTGTGAGGGAACAGTTGTGGACTGCTCCAACCAAAAGCTAACCCGATTACCCAGCCACCTTCCTGA
ATATACCACTGATCTGCGTTTGAATGACAATGACATTTCTGTTTTGGAAGCTATTGGACTCTTCAAGAAATTGCCCAAC
CTCAGAAAAATAAATCTGAGCAATAATAAGATCAAGGAGATTCGAGAAGGCACGTTTGATGGAGCTTCGGGAGTGCAGG
AGCTGATTCTGACAGAGAATCAACTGGAATCAGTGCACGGACGAATGTTTAGAGGCCTCACGGGGCTGAAGACACTAAT
GCTGAGGAGCAACTCTATCAGCTGCATAAACAATGACACCTTCGCTGGACTGAGCTCAGTGAGGCTTCTTTCTCTGTAC
GACAATCACATCAGCACCATCACACCTGGAGCCTTCAGCACATTAGTCTCTTTGTCTACAATCAATTTGCTGGCTAACT
CCTTTAATTGTAACTGTCATTTGGCCTGGCTGGGAAAGTGGTTGAGGAAGAAGAGAATTGTCAGTGGAAATCCACGCTG
CTTGAAACCCTTTTTCTTGAAGGATATTCCAATCCAAGATGTAGATGCCCAGGATTTCACCTGTGAGGGTAATGATGAA
AGCAGCTGCTTGCTTTCTCCTCCCTGTCCTTCCCAGTGTACCTGTGTGGACTCGGTGGTACGTTGCAGTAACAAAGGGC
TGCGAGTAATGCCCAAAGGAATTCCCAAAGATGTGACTGAGCTATACCTGGAAGGGAACCACCTGACTGCTGTGCCGAA
GGGACTCTCTGCCTTCAGGCACCTGACACTGATTGATTTGAGCAACAACAGCATAAGTGTATTGGCCAATTATACCTTC
AGCAACATGACCCAGTTATCAACACTCATCTTGAGCTACAACAGACTTCGGTGCATTCCAGTCCACGCGTTCAATGGGC
TCAGGTCTCTTAGAGTGCTGACGCTCCACGGGAATGATATTTCCAGTGTTCCCGAAGGTTCATTCAACGACCTGGTGTC
CCTGTCCCATCTGGCTCTAGGTACCAACCCTTTACACTGTGACTGCAACCTCCGCTGGCTTTCCGAGTGGGTGAAGGCA
GGGTACAAAGAGCCAGGAATAGCCCGCTGCAGCGGGCCGGAAGCCATGGTGGACAGGCTGCTGCTCACAACACCAACCC
ACCACTTCCAGTGCAAAGAGCCGGTAGATATCAGCGTTGTGTCCAAGTGTAACCCCTGCCTCTCCAATCCATGTAAGAA
CAATGGGACATGCAGCAATGATCCAGTGGAGTTTTATCAGTGCACCTGCCCTTTTGGCTTCAAGGGTCGGGACTGCAGT
GTGCCCATTAATTCTTGCATTCAAAATCCATGTCAGAATGGAGGGACCTGCCACCTCACCGAGGCAAATAAAGATGGAT
TCAGCTGTTCTTGCCCCCTTGGCTATGAGGGGGAGAGGTGTGAAATAAACCCAGATGACTGCGAAGATAATGACTGTGA
GAATAACTCTACGTGTGTGGATGGGATCAACAACTATGTCTGTCTCTGTCCTCCTAATTACACAGGTGAACTGTGTGAT
GAGGTGATTAACCACTGCATTCCTGAGCTAAATCCATGCCAACATGAGTCCAAATGTGTTCCACTTGACAAAGGATCCA
GATGCGAGTGCTTGCCTGGTTACAGTGGCAAACACTGTGAAATAGATGACGATGACTGTGTGGGCCATAAGTGTCGCCA
TGGAGCTGTCTGCGTAGATGCAGTCAATGGCTACACCTGCGTCTGTCCTCAGGGCTTCAGTGGACTTTTCTGTGAAACT
CCTCCACCGATGGTTCTGCTCCAGACGAGCCCATGTGATAACTACGAGTGTCAGAACGGGGCCCAGTGCATCGTCGCAC
ACCAGGAGCCCGTCTGCCGCTGTCTTGCTGGCTTTGCTGGGCAAAAGTGTGAGAAGCTCATCACGGTGAACTTTGTTGG
GAAGGATTCCTATGTGGAGTTGCCATCGGCCAAAATTCGCCCTCAGGCAAACATTTCCCTTCAGGTAGCAACAGACAAG
GACAATGGCATCTTGTTGTACAAAGGAGACAACGATCCTTTGGCTCTGGAGTTGTACCAAGGACATGTGAGGCTCATCT
ATGACACACTGAATTCTCCACCTACCACAGTATATAGTGTGGAAACAGTAAATGATGGGCAATTTCATAGTGTGGAACT
TGTGATGCTGAATCAAACTCTGAACCTGGTGGTGGATAAGGGGACTCCCAAGAGTCTGGGAAAACTCCAGAAACAGTCT
TCTGTCAGCCTCAACACACCGCTCTACATTGGAGGGATCCCGACCTCTACTGGATTATCTTCGCTGCGCCAGGGTGCAG
ATAAGACACCAAATGGCTTTCATGGATGTATTCACGATGTTCGCATCAATAACGAGCTACAGGATTTCAAGGATTTACC
ACAGCAGTCGATAGGAGTCCTTCCTGGCTGTAAATCCTGTAACATCTGCAAGCACGGCATTTGCCGATCCCTGGAAAAA
ACGAGTGTGGTTTGTGAGTGTCACCCCGGCTGGACGGGCCCCCTGTGTGACCAGGAAATTGGAGACCCATGTCTTAACC
ACAAGTGTCTGCATGGGAAGTGCATGGCAGCCAACGTTGCTTACACCTGTAAGTGCATGGAAGGCTACACAGGCACGTA
CTGTGACAAGAAGAACAATTCCTCGAACCCCTGCAGGATTTTGAAATGCAACCATGGGCAGTGTAAGATTTCTGAGCAT
GGGGAACCCTACTGTGAATGTGATCCCAACTATAGCGGAGACCACTGTGACAGAGAGAATCTCTGCCAAGGGGAGATCA
TTCGAGAAGTGGTCCGTAAGCAGCAGGGCTACACGACGTGCGTCACCGCCTCCAAAGTGCCCCGCATGGAATGCCACGG
CAGCTGCGGCAGCGGGCAGTGCTGCGTCCCACTGCGGAGCAAAAGGAGGAAATACTTCTTCCAGTGCGTGGATGGCTCC
ACCTTCACAGAGGAACTGGAGAGACACGTGGAGTGCGGCTGCTCAAAATGCTCATAAGCCATCCTCCAGCCCCTCGCCA
CTTTAATCGACTCAGAAGTGCTATCAAAATGGGACCTATTTACTTTCAGAGTGAAGAAGAAAAGAATTATTAAGTATAT
TGTAAAATAAACAAAAAATAGAACTTATTTTTATTATGGAAAGTGACTATTTTCATCTTTTATTATATAAAGTATCACA
CCACTTTGGGTATATGTATCATATAGTGAGTTATTTTTACCATGAAGCTTTTTTAACAGTTGTAA
CitationGiovannone D, Reyes M, Reyes R, Correa L, Martinez D, Ra H, Gomez G, Kaiser J, Ma L, Stein MP, de Bellard ME. Slits affect the timely migration of neural crest cells via Robo receptor. Dev Dyn. 2012 Aug;241(8):1274-88.
CopyrightCopyright © 2012 Wiley Periodicals, Inc.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_001197042.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
stage 12
Neural Plate/Tube
HH12-13 embryo

Entry 7

GEISHA IdSlit3.Vargesson.2001Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
TGGACTCGGTGGTACGTTGCAGCAACAAAGGGCTGCGAGTAATGCCCAAAGGAATTCCCAAAGATGTGACTGAGCTATA
CCTGGAAGGGAACCACCTGACTGCTGTGCCGAAGGGACTCTCTGCCTTCAGGCACCTGACACTGATTGATTTGAGCAAC
AACAGCATAAGTGTATTGGCCAATTATACCTTCAGCAACATGACCCAGTTATCAACACTCATCTTGAGCTACAACAGAC
TTCGGTGCATTCCAGTCCACGCGTTCAATGGGCTCAGGTCTCTTAGAGTGCTGACGCTCCACGGGAATGATATTTCCAG
TGTTCCCGAAGGTTCATTCAACGACCTGGTGTCCCTGTCCCATCTGGCTCTAGGTACCAACCCTTTACACTGTGACTGC
AACCTCCGCTGGCTTTCCGAGTGGGTGAAGGCAGGGTACAAAGAGCCAGGAATAGCCCGCTGCAGCGGGCCGGAAGCCA
TGGTGGACAGGCTGCTGCTCACAACACCAACCCACCACTTCCAGTGCAAAGAGCCGGTAGATATCAGCGTTGTGTCCAA
GTGTAACCCCTGCCTCTCCAATCCATGTAAGAACAATGGGACATGCAGCAATGATCCAGTGGAGTTTTATCAGTGCACC
TGCCCTTTTGGCTTCAAGGGTCGGGACTGCAGTGTGCCCATTAATTCTTGCATTCAAAATCCATGTCAGAATGGAGGGA
CCTGCCACCTCACCGAGGCAAATAAAGATGGATTCAGCTGTTCTTGCCCCCTTGGCTATGAGGGGGAGAGGTGTGAAAT
AAACCCAGATGACTGCGAAGATAATGACTGTGAGAATAACTCTACGTGTGTGGATGGGATCAACAACTATGTCTGTCTC
TGTCCTCCTAATTACACAGGTGAACTGTGTGATGAGGTGATTAACCACTGCATTCCTGAGCTAAATCCATGCCAACATG
AGTCCAAATGTGTTCCACTTGACAAAGGATCCAGATGCGAGTGCTTGCCTGGTTACAGTGGCAAACACTGTGAAATAGA
TGACGATGACTGTGTGGGCCATAAGTGTCGCCATGGAGCTGTCTGCGTAGATGCAGTCAATGGCTACACCTGCGTCTGT
CCTCAGGGCTTCAGTGGACTTTTCTGTGAAACTCCTCCACCGATGGTTCTGCTCCAGACGAGCCCATGTGATAACTACG
AGTGTCAGAACGGGGCCCAGTGCATCGTCGCACACCAGGAGCCCGTCTGCCGCTGTCTTGCTGGCTTTGCTGGGCAGAA
GTGTGAGAAGCTCATCACGGTGAACTTTGTTGGGAAGGATTCCTATGTGGAGTTGCCATCGGCCAAAATTCGCCCTCAG
GCAAACATTTCCCTTCAGGTAGCAACAGACAAGGACAATGGCATCTTGTTGTACAAAGGAGACAACGATCCTTTGGCTC
TGGAGTTGTACCAAGGACATGTGAGGCTCATCTATGACACACTGAATTCTCCACCTACCACAGTATATAGTGTGGAAAC
AGTAAATGATGGGCAATTTCATAGTGTGGAACTTGTGATGCTGAATCAAACTCTGAACCTGGTGGTGGACAAGGGGACT
CCCAAGAGTCTGGGAAAACTCCAGAAACAGTCTTCTGTCAGCCTCAACACACCGCTCTACATTGGAGGGATCCCGACCT
CTACTGGATTGTCTTCGCTGCGCCAGGGTGCAGATAAGACACCAAATGGCTTTCATGGATGTATTCACGATGTTCGCAT
CAATAACGAGCTACAGGATTTCAAGGATTTACCACAGCAGTCGATAGGAGTCCTTCCTGGCTGTAAATCCTGTAACATC
TGCAAGCACGGCATTTGCCGATCCCTGGAAAAAACGAGTGTGGTTTGTGAGTGTCACCCCGGCTGGACGGGCCCCCTGT
GTGACCAGGAAATTGGAGACCCATGTCTTAACCACAAGTGTCTGCATGGGAAGTGCATGGCAGCCAACGTTGCTTACAC
CTGTAAGTGCATGGAAGGCTACACAGGCACGTACTGTGACAAGAAGAACAATTCCTCGAACCCCTGCAGGATTTTGAAA
TGCAACCATGGGCAGTGTAAGATTTCTGAGCATGGGGAACCCTACTGTGAATGTGATCCCAACTATAGCGGAGACCACT
GTGACAGAGAGAATCTCTGCCAAGGGGAGATCATTCGAGAAGTGGTCCGTAAGCAGCAGGGCTACACGACGTGCGTCAC
CGCCTCCAAAGTGCCCCGCATGGAATGCCACGGCAGCTGCGGCAGCGGGCAGTGCTGCGTCCCACTGCGGAGCAAAAGG
AGGAAATACTTCTTCCAGTGCGTGGATGGCTCCACCTTCACAGAGGAACTGGAGAGACACGTGGAGTGCGGCTGCTCAA
AATGCTCATAAGCCATCCTCCAG
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Vargesson et al. 2001.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 20
stage 24
Leg AER
Limb Buds
Paraxial Mesoderm
 
25-30
stage 26
stage 26
stage 28
Limb Buds
Dual-labeling: Red= anti-neurofilament (NF); Blue= cSlit3 In situ hybridization
31-44
stage 32
stage 44
stage 44
stage 44
Limb Buds
peridigitally
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.2000

Mouse

EmageMGI:1315202
EurexpressMGI:1315202
MGI GXDMGI:1315202

Frog

Xenbase991049

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-010306-4
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