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SNAI1 Gene Summary Expression Other Species Expression JBrowse Gene Official Symbol SNAI1 Official Full Name snail family transcriptional repressor 1 CGNC ID 6068 also known as zinc finger protein SNAI1|snail homolog 1|snail like protein, snail gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Entrez Gene Ensembl Gene Genetic Phenotypes MOD Fruit Fly 34906 FBgn0001983 Human Mouse Xenopus Zebrafish
Gene Ontology Molecular Function Biological Process Cellular Component
Links to other databases
Entry 1 GEISHA Id SNAI1.UAPCR Data Source GEISHA ISH Analysis Forward cDNA Template Primer TTATAAAAGCTTGCGGCCGCAGAATATGCCAGCAAGAAGCCCAACTAC Reverse cDNA Template Primer GCTCTAGAAATTAACCCTCACTAAAGGCGACCCAAAGATGTCCAGATGG cDNA Template Length 832 Complete cDNA Template Probe show GCCAGCAAGAAGCCCAACTACAGCGAGCTAGAGAGCCAGACCGTGCTGGCTGCCCCGCTGCTGTATGAGACGTGTGCAC
Entry 2 GEISHA Id Snail.Graham.2007 Data Source Publication Complete cDNA Template Probe show GTGGCGCTTGGCAGTACGATGCCGCGCTCGTTCCTGGTGAAGAAGCACTTCTCGGCCAGCAAGAAGCCCAACTACAGCG
Citation Graham A, Blentic A, Duque S, Begbie J.
Delamination of cells from neurogenic placodes does not involve an epithelial-to-mesenchymal transition.
Development. 2007 Dec;134(23):4141-5. Epub 2007 Oct 24. Copyright Published by The Company of Biologists 2007 Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_205142).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-18 stage 18
stage 18
stage 18
Head Mesenchyme Somites
Entry 3 GEISHA Id Snail.Garcia-Castro.2000 Data Source Publication Complete cDNA Template Probe show GTGGCGCTTGGCAGTACGATGCCGCGCTCGTTCCTGGTGAAGAAGCACTTCTCGGCCAGCAAGAAGCCCAACTACAGCG
Citation García-Castro MI, Vielmetter E, Bronner-Fraser M. N-Cadherin, a cell adhesion molecule involved in establishment of embryonic left-right asymmetry. Science. 2000 May 12;288(5468):1047-51. Copyright Copyright © 2000, The American Association for the Advancement of Science Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_205142).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-9 stage 9
stage 9
Lateral Plate Mesoderm Somites
Entry 4 GEISHA Id SNAIL1.Delfini.2009 Data Source Publication Complete cDNA Template Probe show GTGGCGCTTGGCAGTACGATGCCGCGCTCGTTCCTGGTGAAGAAGCACTTCTCGGCCAGCAAGAAGCCCAACTACAGCG
Citation Delfini MC, De La Celle M, Gros J, Serralbo O, Marics I, Seux M, Scaal M, Marcelle C. The timing of emergence of muscle progenitors is controlled by an FGF/ERK/SNAIL1 pathway. Dev Biol. 2009 Sep 15;333(2):229-37. Epub 2009 May 13. Copyright Copyright © 2009 Published by Elsevier Inc. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_205142.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-20 stage 20
stage 20
stage 20
stage 20
Dermomyotome Myotome Trunk Mesenchyme
Entry 5 GEISHA Id SNAII.Darnell.2010 Data Source Publication Complete cDNA Template Probe show GTGGCGCTTGGCAGTACGATGCCGCGCTCGTTCCTGGTGAAGAAGCACTTCTCGGCCAGCAAGAAGCCCAACTACAGCG
Citation Darnell DK, Stanislaw S, Kaur S, Antin PB. Whole mount in situ hybridization detection of mRNAs using short LNA containing DNA oligonucleotide probes. RNA. 2010 March; 16(3): 632637. Copyright Copyright © 2010 RNA Society Comments Probes were multiple LNAs whose sequences can be found at http://rnajournal.cshlp.org/content/suppl/2010/01/08/rna.1775610.DC1/Supp_figs_S1_S3.pdf. NCBI (acc #NM_205142.1) is given for reference only.
Entry 6 GEISHA Id SNAIL-1.Dady.2012 Data Source Publication Complete cDNA Template Probe show GTGGCGCTTGGCAGTACGATGCCGCGCTCGTTCCTGGTGAAGAAGCACTTCTCGGCCAGCAAGAAGCCCAACTACAGCG
Citation Dady A, Blavet C, Duband JL Timing and kinetics of E- to N-cadherin switch during neurulation in the avian embryo DEVELOPMENTAL DYNAMICS. Volume 241, Issue 8, August 2012, Pages: 13331349. Copyright Copyright © 2012 Wiley-Liss, Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_205142.1).
Entry 7 GEISHA Id SNAI1.Trevers.2023 Data Source GEISHA ISH Analysis Complete cDNA Template Probe show GCAGCGGGCGGTGGCGCTGGGCGAGTACGATGCCGCGCTCGTTCCTGGTGAAGAAGCACTTCTCGGCCAGCAAGAAGCC
Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_205142 ).
Mouse Frog Fruit Fly Zebra Finch Zebrafish
