GEISHA - A Chicken Embryo Gene Expression Database
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SOX13
SRY-box 13

Gene
Official SymbolSOX13
Official Full NameSRY-box 13
CGNC ID361
also known astranscription factor SOX-13|SRY (sex determining region Y)-box 13
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_003642722
PolypeptideXP_003642770
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.10261
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene419820
Ensembl Gene
KEGGgga:419820
GEISHA IdSOX13.Trevers.2023Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GGGGGGGCAGCGGGGCTGCTGGCACCAGGCGCTGGTGACCCCCGATGGGATGGGATGCGGTGCAGGCAAAGGCCCAGCA
GCTGCAGGGATAGATGAGATGGCGGTGGGCGATGGGGGGGTTTGGGTACGTAGCGGTGCTGCTGCTGCTGTAGGGAATG
GGGCTCTGCAGCTTGGCCGGGAGCTGATGGCTCAGGTACCCTGCAGCCCCCAGTAAGGACCTGAGGGGATTGGGACGTG
GGAAACCTTCCAGCCCTCTACTCCCTATCTATGCCACCCGCCACCCCCTGGCCATGGGGACACCCATAAGCTCTGCTCA
GCCCAAGCCTCCCCAGCCCACCGCGGTTCCCCCCTTACAGCCTGGCAGTGAATTCCCATGGAGCCTTTTTTTAGCTCTT
GCCTGACCCGAGTGTGAGCCAAGGGCACTGAGGAGCCCCTTTGTGCTCCCGACGCTCTGTCCACTTTGTAAATAAAGCG
GGTTGCTGTTCCCTGGCTGTGCCCCAGCCCTCGGGCAGCCCCAATGCACGGCACCGCTCTGGGTCCATGCATCCCCCGG
GTGCCTCCTTTTGCACCGCAGCTCTTGCGAGCGCAGGCTTCACCCCGTGCATAAGTGGAAACAGCGGGGTTGGGGAGGG
GGTGGGGGGAGAGGGAAGTGGGGGAAGAGGAAAACATTGACAGCAAAAAA
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XII
Area Pellucida
posterior area pellucida
1-3
stage 3
Epiblast
Neural Plate/Tube
prospective neural plate / epiblast surrounding anterior primitive streak
4-6
stage 4
Neural Plate/Tube
neural plate including midline
7
stage 7
Neural Plate/Tube
Primitive Streak
neural plate / primitive streak
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.10261

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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