GEISHA - A Chicken Embryo Gene Expression Database
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SPON1
spondin 1

Gene
Official SymbolSPON1
Official Full Namespondin 1
CGNC ID9117
also known asspondin-1, spondin-1|F-spondin|spondin 1, extracellular matrix protein, Spondin-1 precursor , F-spondin
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204851
PolypeptideNP_990182
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.3330
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly36333FBgn0033710
Human10418ENSG00000262655MIM:604989
Mouse233744ENSMUSG00000038156All phenotypic alleles (2):Targeted, other(2) MGI:2385287
Xenopus100036727, 378682991005
Zebrafish58027ENSDARG00000010029ZDB-GENE-000427-9ZFIN:ZDB-GENE-000427-9
Gene Ontology
Molecular Function
Biological Processcell adhesion
Cellular Componentproteinaceous extracellular matrix
Links to other databases
Entrez Gene395657
Ensembl Gene
KEGGgga:395657

Entry 1

GEISHA IdSPON1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCAGGTATGGAAAAGAGGCGTTG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGTGTGACTGTGTTATGGGCTGACATCcDNA Template Length897
Forward cDNA Template Probeshow
TATTGAGCTGCCNGATTATTTAAGTAAGTTGCTATTTGAGAAACAAAGATGGATTTTGCATGGAACGCAGCATCCATGT
GAACAAAAGTATGTAGGGTAATTATTTCAACTATCGCTTAACCCAATATTGTAAAAAGATAAACATGCACCTTTAATAT
TATTGAACCAGCATTACTGAAATTTCTCCTTGGCATAGTTGTATAATCACATAGGCACTGCTTTGGATTTTTAAAATCA
AATCAAGAGAGAAATCCTCCCACATATGAAACATGTCACTTCAAATTAGTTATGTTAATATGCATGCATCCCATGTCTT
TACAAGTAGTATTTCTATATGGCTATTCCATGTCCACAGATATGTCTGTACTTCAGTTAAATGACTCACAATGACCTAC
TATTTTTATGCAGTAAGGGCTAGCTGGAGCATCAAAGATTTACTCTCAGCATTAATCTGTGAGGAAATATTTATAAAAT
ATATTTCTTGCACCAGCAAGACTAAAAAGCAAACCACACTGCAAAAATGAAAACTAATATACACTTTATACTTTTGTTT
GTTTTAAAAACCAAACCAAGGTTGACTTTCCTTTTATAGCTCAGAGTGCATCACTTGGAAGCCTTGTGTTTTCCTAACA
AGGATGAACGTTACATGCTCTTAGCTCCTTTTTGTCTTTGCAGCTAGTAAACTGAGTGCTTTTGGACCTCTTCTTTACC
ATCATGTAGCGCTCCTGAATTCCACCTCCACAGAGTGTAGAACATTCTGTCCAAGCAGTCCATGGTTTCAGCCTACAAA
CTGGATATTGCTCATTATCAATATTTTTTTTTGCTTGGTTCACTTCTTCTTTTCTCCCGGGCCTCCTTCCAACGCCTCT
TTT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
stage 6
Early Endoderm
Ectoderm
Epiblast
Headfold
Neural Plate/Tube
Primitive Streak
 
7-12
stage 7
stage 8
stage 9
stage 9
stage 10
stage 12
Ectoderm
Forebrain
Head Process
Hindbrain
Midbrain
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Somites
 
13-18
stage 13
stage 14
stage 17
stage 17
stage 17
stage 17
stage 17
Diencephalon
Ear/Otic Placode
Eye
Forebrain
Foregut
Heart
Hindbrain
Mesencephalon
Midbrain
Notochord
Oral Pharynx
Pharyngeal Arches and Clefts
Proepicardium
Sclerotome
Somites
Spinal Cord
 
19-24
stage 21
stage 21
stage 21
stage 21
stage 24
stage 24
Allantois
Cranial PNS
Eye
Heart
Hindbrain
Lens
Mesonephros
Midbrain
Notochord
Pharyngeal Arches and Clefts
Proepicardium
Sclerotome
Spinal Cord
Spinal Ganglia and Nerves
Tail
Wing Mesenchyme
 
25-27
stage 27
stage 27
stage 27
stage 27
stage 27
Cardinal Veins
Cranial PNS
Eye
Foregut
Heart
Leg Mesenchyme
Lung
Mesonephros
Proepicardium
Sclerotome
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme
 

Entry 2

GEISHA IdO46Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
TTCTCTCACCAAAAGAATCTGTGAACAAGATTCAGCCTCTGAAGGTGTGACTGACAAACCAATATTAGATTGCTGTGCC
TGTGGAACTGCCAAATACAGGCTAACGTTTTATGGAAATTGGTCGGAAAAAACACATCCCAAAGACTTTCCTCGGCGCA
CCAACCATTGGTCTGCGATCATTGGTAGCTCTCACTCAAAGAACTACATCCTTTGGGAGTATGGAGGGTATGCTAGTGA
AGGTGTCAAGCAGGTTGCAGAGCTGGGATCCCCAGTCAAGATGGAAGAAGAAATTCGACAACAAAGTGATGAGGTTTTA
ACAGTCATCAAGGCAAAAGCACAGTGGCCTGCCTGGCAGCCTCTGAATGTGAGAGCTGCTCCCTCTGCTGAGTTTTCTG
TTGATCGCCACCGGCACCTGATGTCCTTCCTCACCATGCTGGGGCCCAG
Commentsother stages not yet available
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Heart
 
7-9
stage 9
stage 9
Somites
 

Entry 3

GEISHA IdSPON1.Peterziel.2011Data SourcePublication
Complete cDNA Template Probeshow
GTGTCCCTCCCTCCTCCCTCCCTCCCTCTCTCCCTCCCTCCCCGCCTGCCCCCTCCCCGCCTCTCCCCTCCCCTCTCCC
GCGCCGCAGCCTCCCCCGGGCCGCCCGGCGCTGCCCGAGCTGTGCGGGCGCCGAGGATGGCAGCGCGGCTGCGGCCCCT
GGCCCTGCGGCTGCTGGCGCGCACCTTCCCCTTGGTGGCGAGGGGCTTCTCCGACGAGACCCTGGAGAAAGCCGCCAAA
TCCGAGGGCTACTGCAGCCGGATCCTGCGAGCCCAAGGCACCAGGAGGGAAGGGTACAATGAATTTAGCCTGAGGGTGG
AGGGCGATCCGGAATTCTACAAGCCTGGGAACAGTTACCGCGTGACGCTTTCTGCTGCCACTCCTGCGTACTTTCGAGG
ATTCACATTGATTGCTCTGAAGGAAGGAAAAGAAGGTGATAAAGAGGAAGACCATGCGGGAACTTTTCAGATCATAGAT
GAAGAAGAGACGCAGTTCATGAGCAATTGTCCCGTCGCGGTTACTGAGAGCACACCTAGAAGGAGGACACGCATCCAGG
TCTTCTGGACAGCTCCTCCTACTGGTACGGGCTGTGTCATTCTGAAAGCCAGTATTGTGCAGAAGCGCATTATTTATTT
TCAGGACGAGGGTTCTCTCACCAAAAGAATCTGTGAACAAGATTCAGCCTCTGAAGGTGTGACTGACAAACCAACATTA
GATTGCTGTGCCTGTGGAACTGCCAAATACAGGCTAACGTTTTATGGAAATTGGTCGGAAAAAACACATCCCAAAGACT
TTCCTCGGCGCACCAACCATTGGTCTGCGATCATTGGTAGCTCTCACTCAAAGAACTACATCCTTTGGGAGTATGGAGG
GTATGCTAGTGAAGGTGTCAAGCAGGTTGCAGAGCTGGGATCCCCAGTCAAGATGGAAGAAGAAATTCGACAACAAAGT
GATGAGGTTTTAACAGTCATCAAGGCAAAAGCACAGTGGCCTGCCTGGCAGCCTCTGAATGTGAGAGCTGCTCCCTCTG
CTGAGTTTTCTGTTGATCGCCACCGGCACCTGATGTCCTTCCTCACCATGCTGGGGCCCAGTCCCGACTGGAATGTGGG
CCTGTCTGCTGAGGACCTCTGCACCAAGGACTGTGGCTGGGTTCAGAAAGTCGTGCAGGATTTAATCCCCTGGGATGCC
GGCACAGACAGTGGCGTCACCTATGAGTCACCCAACAAACCTACAGTTCCTCAAGAGAAGATTAGACCACTTACAAGCT
TAGATCACCCTCAGAGTCCATTTTATGATCCAGAAGGAGGATCTATCAAGCTTGTAGCCAGAGTCGTGCTTGAAAGAAT
TGCACGCAAGGGGGAGCAGTGCAACTTCGTACCTGATAACATAGATGATATTGTGGCAGACCTAGCACCAGAAGAAAAA
GAAGAAGATGATACCCCTGAGACCTGCATATATTCAAACTGGTCCCCCTGGTCAGCCTGCAGCTCCTCTACCTGTGAGA
AGGGCAAGAGGATGAGGCAGAGAATGCTTAAAGCTCAGCTGGACCTCAGTGTGCCCTGTCCTGATACCCAAGATTTTCA
GCCATGCATGGGTCCAGGCTGCAGTGATGAAGATGGTTCAACTTGCATGATGTCTGACTGGATTACATGGTCCCCCTGT
AGTGTTTCCTGTGGAATGGGAACGCGATCTAGAGAGAGATATGTAAAGCAATTCCCCGAAGATGGCTCTATGTGCAAAG
TGCCTACTGAAGAAACTGAGAAATGTATTGTAAATGAGGAATGCTCCCCTAGCAGCTGCCTTGTCACCGAATGGGGAGA
GTGGGATGAATGCAGTGCTAGCTGTGGCACAGGAATGAAAAGGCGACACAGAATGATCAAGATGACTCCTGCTGATGGA
TCTATGTGCAAGGCAGAAACTACAGAGGCAGAGAAATGCATGATGCCCGAATGCCATACTATTCCCTGCCTTCTATCCC
CATGGTCTGAATGGAGCGACTGCAGCGTGACATGTGGGAAGGGAATGCGAACCCGGCAAAGGATGCTGAAATCTGCAGC
TGAGCTTGGAGACTGCAATGAGGAACTGGAGCAAGCAGAGAAATGCATGCTACCTGAATGCCCCATTGACTGTGAGCTA
ACGGAGTGGTCCCAGTGGTCCGAGTGCAATACCTCCTGTGGGAAGGGCCACATGATCAGAACAAGAATGATCAAAATAG
AACCACAGTTTGGAGGAACAGCATGCCCAGAAACTGTCCAACGTACTAAATGTCGAGTAAGGAAATGCCTGAGAGGCCC
AGGTATGGAAAAGAGGCGTTGGAAGGAGGCCCGGGAGAAAAGAAGAAGTGAACAAGCAAAAAAAAATATTGATAATGAG
CAATATCCAGTTTGTAGGCTGAAACCATGGACTGCTTGGACAGAATGTTCTACACTCTGTGGAGGTGGAATTCAGGAGC
GCTACATGATGGTAAAGAAGAGGTCCAAAAGCACTCAGTTTACTAGCTGCAAAGACAAAAAGGAGCTAAGAGCATGTAA
CGTTCATCCTTGTTAGGAAAACACAAGGCTTCCAAGTGATGCACTCTGAGCTATAAGGAAAGTCAACCTTGGTTTGGTT
TTTAAAACAAACAAAAGTATAAAGTGTATATTAGTTTTCATTTTTGCAGTGTGGTTTGCTTTTAGTCTTGCTGGTGCAA
GAAATATATTTTATAAATATTTCCTCCGATTAATCTAGGTAAACTTTGATGCTCCAGCTAGCCCTTACTGCATAAAAAT
AGTAGGTCATTGTGAGTCATTTAACTGAAGTACAGACATATCTGTGGACATGGAATAGCCATATAGAAATACTACTTGT
AAAGACATGGGATGCATGCATATTAACATAACTAATTTGAAGTGACATGTTTCATATGTGGGAGGATTTCTCTCTTGAT
TTGATTTAAAAATCCAAAGCAGTGCCTATGTGATTATACAACTATGCCAAGGAGAAATTTCAGTAATGCTGGTTCAATA
ATATTAAAGGTGCATGTTTATCTTTTTACAATATTGGGTTAAGCGATAGTTGAAATAATTACCCTACATACTTTTGTTC
ACATGGATGCTGCGTTCCATGCAAAATCATCTTTGTTTCTCAAATAGCAACTTACTTAAATAATCTGTGCAGCTCAATA
GTGATGTCAGCCCATAACACAGTCACAACACACAAAGACATGTGGCTATCACAGTACCTGTCACTG
CitationPeterziel H, Sackmann T, Strelau J, Kuhn PH, Lichtenthaler SF, Marom K, Klar A, Unsicker K. F-spondin regulates neuronal survival through activation of disabled-1 in the chicken ciliary ganglion. Mol Cell Neurosci. 2011 Feb;46(2):483-97. Epub 2010 Dec 9.
Copyright© 2010 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204851.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-34
stage 34
stage 34
stage 34
stage 34
stage 34
stage 34
Cranial Ganglia
Cranial Nerve
Eye
Paraffin Sections: F-spondin ISH + IHC
Paraffin Sections: F-spondin ISH + IHC
dissociated E8 CG cells
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.3330

Mouse

EmageMGI:2385287
EurexpressMGI:2385287
MGI GXDMGI:2385287

Frog

Xenbase991005

Fruit Fly

BDGPFBgn0033710

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-000427-9
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