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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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STOX1
storkhead box 1

Gene

Official Symbol	STOX1
Official Full Name	storkhead box 1
CGNC ID	66126
also known as	storkhead-box protein 1
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_003641470
Polypeptide	XP_003641518
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	100858074
Ensembl Gene
KEGG	gga:100858074

Entry 1

GEISHA Id	STOX1.Kee.2007	Data Source	Publication
Complete cDNA Template Probe	show ATGAATGCAGATCAAATGATGGTCACGCAGAAAACGTTAGTGGAGCAGTTAGTGAAAAGGTATCCAGGCATTGCAGTTC CCTCCCAGAAAATCTTATACAATATCCTTGGCACTCTAATTAAAGAAAGGAAGATCTATCATACAGGAGAGGGATATTT TATTGTTACCCCCAACACCTACTTTGTCACAAATGATGCCGCAGAATACAATAAAAGGGTCTGGCAGAAGGACAGTGAG GACGCATACCAGGCAAACTGTGGGAGCTGTGCAGACCCAGTGAAAGAAAACATTGCTACAGTATCCCGTTGTCTCCCTG ATCAGAATATGCTCTGTGAGCAAAGACTTGGGCAGCTAATGAACCAGGAGCCTAAGGGAGGAGGCAAGCAAGGCTGCAG TGAAGGGAAGCCTTTGATTCAAACTCAGGTCATCTCCTCATCTGCTGAAAACCGTGCTTGGGACACCATGAAATCCCTG ACATCAGTGAAAGAGAAACTGAAATGTAGAAGATTTGGCCTTGGCCTTTTCTGGAGAAGTACTTCTAAAAAAGAAAAAC ATAAGGAGTACTCTACGTTTTCAGCCCAGTTTCCCCCCAGGGAGTGGCCAGTCAGAGATGAAGATGACTTAGATAATAT TCCACGTGATGTTGAACATGAAATCATCTGGTGTATTAACCCTACTCTTACTGTTGATAATTTGATTAAACACACAAGA TTAATGCAAACGTTAGAGGAGAGGAAAAAATATACCACTAAGAGTACCTCGGCTGAAGTGTCAACACTAAGGCAAAAGT ACCTTTCAAAGGAGTGTGTTCAAAATACACAAATTAGAACAGCAAAACACAGAAGGAAAACGAAGTCAAACAAAGAGAA GCAAAGCAGCAGAAACATCAGGAAATCTCATGTGCCTGAGGCAACATCCCAAAGTGAGAAGAAGCTAGAAGAGAATGTT TCACTGCTTGTCACAAACCAACAGCCACCGGATGCAGCAGTGGAATCCCAGGTCATATATAAAAAGCAAATTAAGAACC CTTTTCAGGGTCTCTCATGGAGACACAACTTTTATGCAAAAGCATACAAGGGTCGTATTAACAGTCAGTGGAAGTCCAG GAGACGAAAGCAGGAAAGGGATTTACAGAGGTTTACAAAGTCCTTGGACTCCCCCAGAGCCTTTGAATATGAAGCTGAA CAACCACTTGCTGAAATGCAGGCTGACAACACTAAGCAAAACAAATTACCCCAAACTCATAGGTTTCCCTTCCAATTAA AGAAAAACAGTTTAAGTGACAATGTTAGTTACCCACACAGCAGTACTTTGCGAATAGATGATAAACATAAATACTTTCT GGAGAGTAATGTTTCTGAAGACATCTATAGAGGAACTGTGAAGAGAAATCCTGGGGATATTCAAAAATCCCCACACTCC TACACTGAAGATAAAAGTGTGCATAAAGAGAAAGCTAAATATTTACTCAATCCAAAAGGTGAATGTTGCACCTACAAGG CTCACACTGTATGTGAGTTGTTGGACCAAGCAGCAAATGAATTTCAAAATGTCCATCTCTCAAATTATACAACCAGTGT TACAAGGGAAAGAGAATTTGGTGTGATATACAGACAAAAGTCTGATAAAAAGAATGAACTTGTATTTAAATACGACTGT GCCAACTGTCCTGGATCAACAAAGCCAGAAAGTGACAGAATTACCAACAAATGCCATCTTCAGAACCAGAAAGCGCGTG ATGATAGTGACAAGTGTAGTTTGTTGCATCTGGATGACAATTTTGAATGCAGTGAACCACATCAGCTGCTTTCTTGCCG TGCATTTTCAGGTACAAGAGACTGGAGTAAAGCTTTGCAAAAATTGGGGACTGCTCTAAAAATCTCTAAGGTTAATATT TATCCAAACCACTGTAATATAACTGTAAATAGACATGACTCTGGAGGGTATGCATATAAGGGAAGTGCTGATGTTGCAG AATCAATTTGCGGCTCAGAAAAGCATCACAAGCCAGACCACACAGAAGACAGTTGTTTGTGCAGCCAGGTTCTTCCAGT GGTTACCAGAAAGGAAGAACAAACCAGCTTTACTGAAAACATGAAGGATTCATCTATAGATTTCTGTGACACTAAGGAG GCTGATGCTTTGCAGAACCGCACCTGTGAGATGGCAGAAGTAGTGGCATGCCACGCTCTGGGCCCACAAGCCAAAGAAA CAAGAACCCCCCCAGGAAAAATAGGTCTTGTTTTAAAGAATGAATATACTGTGATATCAGGAGAGAATCACACAGAAGG GGCAGAAAACCACAGCATTACAGGAGACAGTGGAATTGACTCTCCAAGATGGACTGAAAAGAAGATGAAGCTTCCTGCC AAATTCTGA
Citation	Yun Kee, Byung Joon Hwang, Paul W. Sternberg, Marianne Bronner-Fraser. Evolutionary conservation of cell migration genes: from nematode neurons to vertebrate neural crest. Genes Dev. 2007 February 15; 21(4): 391396.
Copyright	Copyright © 2007, Cold Spring Harbor Laboratory Press
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #XM_003641470.1).

Stage

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7-9

stage 9

Lateral Plate Mesoderm
Midbrain
Neural Crest

Entry 2

GEISHA Id	STOX1.Trevers.2023	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show AGTACCTCGGCTGAAGTGTCAACACTAAGGCAAAAGTACCTTTCAAAGGAGTGTGTTCAAAATACACAAATTAGAACAG CAAAACACAGAAGGAAAACGAAGTCAAACAAAGAGAAGCAAAGCAGCAGAAACATCAGGAAATCTCATGTGCCTGAGGC AACATCCCAAAGTGAGAAGAAGCTGGAAGAGAATGTTTCACTGCTTGTCACAAACCAACAGCCACCGGATGCAGCAGTG GAATCCCAGGTCATATATAAAAAGCAAATTAAGAACCCTTTTCAGGGTCTCTCATGGAGACACAACTTTTATGCAAAAG CATACAAGGGTCGTATTAACAGTCAGTGGAAGTCCAGGAGACGAAAGCAGGAAAGGGATTTACAGAGGTTTACAAAGTC CTTGGACTCCCCCAGAGCCTTTGAATATGAAGCTGAACAACCACTTGCTGAAATGCAGGCTGACAACACTAAGCAAAAC AAATTACCCCAAACTCATAGGTTTCCCTTCCAATTAAAGAAAAACAGTTTAAGTGATAATGTTAGTTACCCACACAGCA GTACTTTGCGAATAGATGATAAACATAAATACTTTCTGGAGAGTAATGTTTCTGAAGACATCTATAGAGGAACTGTGAA GAGAAATCCTGGGGATATTCAAAAATCCCCAGACTCCTACACTGAAGATAAAAGTGTGCATAAAGAGAAAGCTAAATAT TTACTCAATCCAAAAGGTGAATGTTGCACCTACAAGGCTCACACTGTATGTGAGTTGTTGGACCAAGCAGCAAACGAAT TTCAAAATGTCCATCTCTCAAATTATACAACCAGTGTTACAAGGGAAAGAGAATTTGGTGTGATATACAGACAAAAGTC TGATAAAAAGAATGAACTTGTATTTAAATACGACTGTGCCAACTGTCCTGGATCAACAAAGCCAGAAAGTGACAGAATT ACCAACAAATGCCATCTTCAGAACCAGAAAGCGCATGATGATAGTGACAA
Comments	The complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023.