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SEMA3A semaphorin 3A Gene Summary Expression Other Species Expression JBrowse Gene Official Symbol SEMA3A Official Full Name semaphorin 3A CGNC ID 4946 also known as COLL-1, semaphorin-3A, semaphorin-3A|collapsin|collapsin-1|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Links to other databases
Entry 1 GEISHA Id Sema3A.Lwigale.2007 Data Source Publication Complete cDNA Template Probe show CGTGAAAATGCGATTGATGGAGAGCACACTGGAAAAGCCACTCATGCCAGAATAGGGCAGATCTGTAAGAATGACTTTG GTGGACACAGGAGCCTTGTTAACAAATGGACAACTTTCCTCAAAGCACGTCTGATTTGTTCTGTGCCAGGACCCAATGG TATTGACACACACTTTGATGAATTACAGGACGTGTTCCTAATGAACTCTAAGGACCCTAAAAATCCAATAGTGTATGGA GTGTTTACAACTTCCAGTAATATCTTCAAGGGATCAGCAGTATGTATGTACAGCATGACTGATGTGAGGAGGGTATTTC TTGGCCCCTATGCCCACCGAGATGGCCCAAACTACCAGTGGGTTCCCTACCAAGGGCGAGTTCCATATCCACGGCCAGG AACTTGCCCCAGTAAAACATTTGGCGGCTTTGACTCCACCAAGGACCTTCCTGATGAAGTTATAACATTTGCAAGAAGT CATCCTGCCATGTATAACCCAGTATTCCCCATCAACAGCCGTCCAAT
Citation Lwigale PY, Bronner-Fraser M. Lens-derived Semaphorin3A regulates sensory innervation of the cornea. Dev Biol. 2007 Jun 15;306(2):750-9. Epub 2007 Apr 18. Copyright Reprinted with permission from Elsevier.
Copyright © 2007 Elsevier B.V. All rights reserved. Comments Authors said: Sema3A; forward 5′-cgtgaaaatgcgattgatggagag-3′, reverse 5′-attggacggctgttgatggg-3′) used as template for sense and antisense probe synthesis. From this, probe was determined from NM_204977.1.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-30
stage 26
Eye Lens Retina 31-36 stage 34
stage 36
Eye Lens Retina
Entry 2 GEISHA Id Sema3A.Masuda.2003 Data Source Publication Complete cDNA Template Probe show GCTGATGGAAGACTTTGTTACTTGTTTCTAGCTGGGAGCGACCCAAAGAGGATTATGTTATGGGCAGAAGATGTTATTT ATGTTGCCTGAAGTTCCCCGGCGGCGCCCGGCAGGACGGGGAGCGCCGCGGCTCCGGCTCGCAGGGACCCTACAGTGGC TGCTGCAGCATGGGCTGGCTCAGGGGGATTGCCTTGCTTTCCTTGGGAGTATTACTAGCAGGAAGAGTGAACTGCCAGC ATGTGAAGAATAACGTGCCAAGACTCAAATTATCCTATAAAGAAATGTTGGAATCCAATAATATAGTCAATTTCAATGG ACTAGCTAATAGTTCCAGTTACCATACTTTCCTCTTGGATGAAGAACGAAGTCGGCTGTATGTTGGAGCAAAAGACCAC ATATTTTCTTTCAACCTGGTTAACATCAAGGAATATCAAAAGATTGTTTGGCCTGTATCTCATTCCCGAAGGGATGAGT GTAAGTGGGCTGGAAAAGATATTCTGAGAGAATGTGCTAATTTCATCAAGGTGCTTAAGACTTATAACCAAACACACTT GTACGCTTGTGGAACGGGGGCTTTTCATCCCATGTGCACTTATATTGAAGTTGGAAGCCATCCTGAGGACAACATTTTT AGGATGGAAGATTCACATTTTGAAAACGGCCGAGGGAAAAGCCCTTACGATCCTAAATTGCTGACAGCTTCTCTTTTAG TAGATGGAGAATTGTACTCTGGCACAGCAGCAGACTTCATGGGCAGAGACTTTGCCATTTTCCGAACTCTGGGGCATCA CCATCCAATCAGAACAGAGCAGCATGACTCCCGGTGGCTAAACGATCCCAGATTTATTAGTGCTCACCTGATACCTGAA AGTGATAATCCAGAAGATGACAAAATCTATTTCTTCTTTCGTGAAAATGCGATTGATGGAGAGCACACTGGAAAAGCCA CTCATGCCAGAATAGGGCAGATCTGTAAGAATGACTTTGGTGGACACAGGAGCCTTGTTAACAAATGGACAACTTTCCT CAAAGCACGTCTGATTTGTTCTGTGCCAGGACCCAATGGTATTGACACACACTTTGATGAATTACAGGACGTGTTCCTA ATGAACTCTAAGGACCCTAAAAATCCAATAGTGTATGGAGTGTTTACAACTTCCAGTAATATCTTCAAGGGATCAGCAG TATGTATGTACAGCATGACTGATGTGAGGAGGGTATTTCTTGGCCCCTATGCCCACCGAGATGGCCCAAACTACCAGTG GGTTCCCTACCAAGGGCGAGTTCCATATCCACGGCCAGGAACTTGCCCCAGTAAAACATTTGGCGGCTTTGACTCCACC AAGGACCTTCCTGATGAAGTTATAACATTTGCAAGAAGTCATCCTGCCATGTATAACCCAGTATTCCCCATCAACAGCC GTCCAATCATGATCAAAACGGATGTAGATTACCAGTTCACACAGATAGTAGTAGATCGAGTAGATGCAGAAGATGGTCA ATACGATGTTATGTTCATTGGCACAGATATTGGAACAGTTCTTAAAGTGGTTTCCATTCCTAAGGAGACTTGGCATGAA TTAGAAGAAGTCTTGCTGGAAGAAATGACCGTCTTTCGGGAACCCACTGTTATTTCAGCAATGAAGATTTCCACAAAAC AGCAACAGCTCTACATTGGCTCAGCCACCGGAGTTTCACAGCTTCCTTTACACCGCTGTGATGTCTATGGAAAAGCATG TGCTGAGTGTTGTCTTGCAAGAGACCCCTACTGCGCCTGGGATGGTTCATCTTGCTCACGTTACTTTCCCACTGCTAAG AGACGTACTAGGCGACAAGACATCCGAAATGGAGATCCCCTCACTCACTGCTCAGACCTGCAGCATCATGATAACCCAA GTGGTCAGACCCTGGAGGAAAAGATTATTTATGGAGTAGAGAATAGCAGCACTTTTCTTGAGTGCAGTCCAAAATCTCA ACGTGCCATAGTCTACTGGCAATTCCAGAAGCAAAATGATGACCACAAAGTTGAGATAAAAGTGGATGATCGAATGATC CGGACAGAACAGGGCCTATTGCTACGAAGTCTTCAACGGAGAGACTCTGGTATTTATTTTTGTCATGCTGTGGAGCATG GCTTCATTCAAACTTTGCTCAAAGTGACACTGGAAGTAATTGATACTGACCACTTGGAAGAGCTGCTCCATAAGGAAGA AGACGCCGATGCCTCCAAGACCAAGGATGCTACCAATAGCATGACTCCTAGTCAAAAGATCTGGTATAGAGACTTCATG CAGTTAATCAATCACCCCAATCTCAACACAATGGATGAATTCTGTGAGCAGGTTTGGAAAAGAGACCGCAAGCAGCGCC GGCAAAGGCCTGCCAATGCGCAGGTGAACACAAATAAGTGGAAGCACCTACAAGAGAATAAAAAAGGTAGGAATAGGAG GACCCATGAATTTGAGAGGGCACCACGGAGTGTCTGAGCTACATTACCTCTAGAAACCTCATCTAAGTAGAAACTTGTA TAGACAGATAACTGGAAAAAAAATGCAATATACATGAACTTTTTCATGGCATTAAGTGGATGTTTACAAGAGTTGAAAG CTCAAACAATTTCCACCGGGTTTAAATACAATATATTTCTAACTTTCCTAGTAAGTCCTTCGTCTCTGCTCTGATTCTA AGACCAGGTAGACCAGAGTTTCAAGGATGAACACTCAGCTGGACATAGCTTACTGCTCAAAAAGTTCTACAAGAGTTCA GCAGGCAGGTTTTGCTTTCTCTGTTGCCTGAGATATAAATGAAATGCTGTATTTCATGCTGTCGTCTTCAAGAAAAACA AAACCCACTTTTCATCATCAGCACCACCATTCCTAGACTATGTATAAAACTGCATGAACTCATTAAGCTGATGAATGTC TAAACACGTGATTGGACACAAGGATTTGTTCTTGTTTTGTCTACCAGTTCTCCTGTTTATGAGTACTAGAAGAGGAAAA ACAATGCTGAATGAGATTGCGGAAATCTTAACAACATAAGCCATTCATCATCTAGAAGAACAAAAAAATGTGGAGTACA CTGGCCTACTACTGATGACTTCTTTCAGCTTTGATCTAAAGATGTATTTTATTAAAACTATAATTTAAATATACCATGA AAAATATGCAGCAAACATTAGCTCTTTTCTAAAATAGATTAGCCTCTTTGTCTTAGAAATATTGTACTTCCTAATTATT GGTTTAGAGGGGAAAAAAAAAAAA
Citation Masuda T, Tsuji H, Taniguchi M, Yagi T, Tessier-Lavigne M, Fujisawa H, Okado N, Shiga T. Differential non-target-derived repulsive signals play a critical role in shaping initial axonal growth of dorsal root ganglion neurons. Dev Biol. 2003 Feb 15;254(2):289-302. Copyright Copyright © 2003 Elsevier Science (USA). All rights reserved. Comments Insufficient information provided in publication to verify the exact sequence used to synthesize probe. The sequence below was obtained from NCBI (NM_204977).
Entry 3 GEISHA Id Sema3A.Riley.2010 Data Source Publication Complete cDNA Template Probe show GCTGATGGAAGACTTTGTTACTTGTTTCTAGCTGGGAGCGACCCAAAGAGGATTATGTTATGGGCAGAAGATGTTATTT ATGTTGCCTGAAGTTCCCCGGCGGCGCCCGGCAGGACGGGGAGCGCCGCGGCTCCGGCTCGCAGGGACCCTACAGTGGC TGCTGCAGCATGGGCTGGCTCAGGGGGATTGCCTTGCTTTCCTTGGGAGTATTACTAGCAGGAAGAGTGAACTGCCAGC ATGTGAAGAATAACGTGCCAAGACTCAAATTATCCTATAAAGAAATGTTGGAATCCAATAATATAGTCAATTTCAATGG ACTAGCTAATAGTTCCAGTTACCATACTTTCCTCTTGGATGAAGAACGAAGTCGGCTGTATGTTGGAGCAAAAGACCAC ATATTTTCTTTCAACCTGGTTAACATCAAGGAATATCAAAAGATTGTTTGGCCTGTATCTCATTCCCGAAGGGATGAGT GTAAGTGGGCTGGAAAAGATATTCTGAGAGAATGTGCTAATTTCATCAAGGTGCTTAAGACTTATAACCAAACACACTT GTACGCTTGTGGAACGGGGGCTTTTCATCCCATGTGCACTTATATTGAAGTTGGAAGCCATCCTGAGGACAACATTTTT AGGATGGAAGATTCACATTTTGAAAACGGCCGAGGGAAAAGCCCTTACGATCCTAAATTGCTGACAGCTTCTCTTTTAG TAGATGGAGAATTGTACTCTGGCACAGCAGCAGACTTCATGGGCAGAGACTTTGCCATTTTCCGAACTCTGGGGCATCA CCATCCAATCAGAACAGAGCAGCATGACTCCCGGTGGCTAAACGATCCCAGATTTATTAGTGCTCACCTGATACCTGAA AGTGATAATCCAGAAGATGACAAAATCTATTTCTTCTTTCGTGAAAATGCGATTGATGGAGAGCACACTGGAAAAGCCA CTCATGCCAGAATAGGGCAGATCTGTAAGAATGACTTTGGTGGACACAGGAGCCTTGTTAACAAATGGACAACTTTCCT CAAAGCACGTCTGATTTGTTCTGTGCCAGGACCCAATGGTATTGACACACACTTTGATGAATTACAGGACGTGTTCCTA ATGAACTCTAAGGACCCTAAAAATCCAATAGTGTATGGAGTGTTTACAACTTCCAGTAATATCTTCAAGGGATCAGCAG TATGTATGTACAGCATGACTGATGTGAGGAGGGTATTTCTTGGCCCCTATGCCCACCGAGATGGCCCAAACTACCAGTG GGTTCCCTACCAAGGGCGAGTTCCATATCCACGGCCAGGAACTTGCCCCAGTAAAACATTTGGCGGCTTTGACTCCACC AAGGACCTTCCTGATGAAGTTATAACATTTGCAAGAAGTCATCCTGCCATGTATAACCCAGTATTCCCCATCAACAGCC GTCCAATCATGATCAAAACGGATGTAGATTACCAGTTCACACAGATAGTAGTAGATCGAGTAGATGCAGAAGATGGTCA ATACGATGTTATGTTCATTGGCACAGATATTGGAACAGTTCTTAAAGTGGTTTCCATTCCTAAGGAGACTTGGCATGAA TTAGAAGAAGTCTTGCTGGAAGAAATGACCGTCTTTCGGGAACCCACTGTTATTTCAGCAATGAAGATTTCCACAAAAC AGCAACAGCTCTACATTGGCTCAGCCACCGGAGTTTCACAGCTTCCTTTACACCGCTGTGATGTCTATGGAAAAGCATG TGCTGAGTGTTGTCTTGCAAGAGACCCCTACTGCGCCTGGGATGGTTCATCTTGCTCACGTTACTTTCCCACTGCTAAG AGACGTACTAGGCGACAAGACATCCGAAATGGAGATCCCCTCACTCACTGCTCAGACCTGCAGCATCATGATAACCCAA GTGGTCAGACCCTGGAGGAAAAGATTATTTATGGAGTAGAGAATAGCAGCACTTTTCTTGAGTGCAGTCCAAAATCTCA ACGTGCCATAGTCTACTGGCAATTCCAGAAGCAAAATGATGACCACAAAGTTGAGATAAAAGTGGATGATCGAATGATC CGGACAGAACAGGGCCTATTGCTACGAAGTCTTCAACGGAGAGACTCTGGTATTTATTTTTGTCATGCTGTGGAGCATG GCTTCATTCAAACTTTGCTCAAAGTGACACTGGAAGTAATTGATACTGACCACTTGGAAGAGCTGCTCCATAAGGAAGA AGACGCCGATGCCTCCAAGACCAAGGATGCTACCAATAGCATGACTCCTAGTCAAAAGATCTGGTATAGAGACTTCATG CAGTTAATCAATCACCCCAATCTCAACACAATGGATGAATTCTGTGAGCAGGTTTGGAAAAGAGACCGCAAGCAGCGCC GGCAAAGGCCTGCCAATGCGCAGGTGAACACAAATAAGTGGAAGCACCTACAAGAGAATAAAAAAGGTAGGAATAGGAG GACCCATGAATTTGAGAGGGCACCACGGAGTGTCTGAGCTACATTACCTCTAGAAACCTCATCTAAGTAGAAACTTGTA TAGACAGATAACTGGAAAAAAAATGCAATATACATGAACTTTTTCATGGCATTAAGTGGATGTTTACAAGAGTTGAAAG CTCAAACAATTTCCACCGGGTTTAAATACAATATATTTCTAACTTTCCTAGTAAGTCCTTCGTCTCTGCTCTGATTCTA AGACCAGGTAGACCAGAGTTTCAAGGATGAACACTCAGCTGGACATAGCTTACTGCTCAAAAAGTTCTACAAGAGTTCA GCAGGCAGGTTTTGCTTTCTCTGTTGCCTGAGATATAAATGAAATGCTGTATTTCATGCTGTCGTCTTCAAGAAAAACA AAACCCACTTTTCATCATCAGCACCACCATTCCTAGACTATGTATAAAACTGCATGAACTCATTAAGCTGATGAATGTC TAAACACGTGATTGGACACAAGGATTTGTTCTTGTTTTGTCTACCAGTTCTCCTGTTTATGAGTACTAGAAGAGGAAAA ACAATGCTGAATGAGATTGCGGAAATCTTAACAACATAAGCCATTCATCATCTAGAAGAACAAAAAAATGTGGAGTACA CTGGCCTACTACTGATGACTTCTTTCAGCTTTGATCTAAAGATGTATTTTATTAAAACTATAATTTAAATATACCATGA AAAATATGCAGCAAACATTAGCTCTTTTCTAAAATAGATTAGCCTCTTTGTCTTAGAAATATTGTACTTCCTAATTATT GGTTTAGAGGGGAAAAAAAAAAAA
Citation Riley KL, Gledhill S, Schubert FR. Early expression of axon guidance molecules in the embryonic chick mesencephalon and pretectum. Int J Dev Biol. 2010;54(4):743-53. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204977.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-18 stage 13
stage 17
Midbrain 19-20 stage 20
Midbrain
Entry 4 GEISHA Id SEMA3A.Kubilus.2010 Data Source Publication Complete cDNA Template Probe show TTCCATATCCACGGCCAGGAACTTGCCCCAGTAAAACATTTGGCGGCTTTGACTCCACCAAGGACCTTCCTGATGAAGT TATAACATTTGCAAGAAGTCATCCTGCCATGTATAACCCAGTATTCCCCATCAACAGCCGTCCAATCATGATCAAAACG GATGTAGATTACCAGTTCACACAGATAGTAGTAGATCGAGTAGATGCAGAAGATGGTCAATACGATGTTATGTTCATTG GCACAGATATTGGAACAGTTCTTAAAGTGGTTTCCATTCCTAAGGAGACTTGGCATGAATTAGAAGAAGTCTTGCTGGA AGAAATGACCGTCTTTCGGGAACCCACTGTTATTTCAGCAATGAAGATTTCCACAAAACAGCAACAGCTCTACATTGGC TCAGCCACCGGAGTTTCACAGCTTCCTTTACACCGCTGTGATGTCTATGGAAAAGCATGTGCTGAGTGTTGTCTTGCAA GAGACCCCTACTGCGCCTGGGATGGTTCATCTTGCTCACGTTACTTTCCCACTGCTAAGAGACGTACTAGGCGACAAGA CATCCGAAATGGAGATCCCCTCACTCACTGCTCAGACCTGCAGCATCATGATAACCCAAGTGGTCAGACCCTGGAGGAA AAGATTATTTATGGAGTAGAGAATAGCAGCACTTTTCTTGAGTGCAGTCCAAAATCTCAACGTGCCATAGTCTACTGGC AATTCCAGAAGCAAAATGATGACCACAAAGTTGAGATAAAAGTGGATGATCGAATGATCCGGACAGAACAGGGCCTATT GCTACGAAGTCTTCAACGGAGAGACTCTGGTATTTATTTTTGTCATGCTGTGGAGCATGGCTTCATTCAAACTTTGCTC AAAGTGACACTGGAAGTAATTGATACTGACCACTTGGAAGAGCTGCTCCATAAGGAAGAAGACGCCGATGCCT
Citation Kubilus JK, Linsenmayer TF. Developmental guidance of embryonic corneal innervation: roles of Semaphorin3A and Slit2. Dev Biol. 2010 Aug 1;344(1):172-84. Epub 2010 May 18. Copyright Copyright © 2011 Elsevier B.V. All rights reserved. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204977.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 1-3 stage 1
Eye 31-40 stage 31
stage 40
Eye Lens
Entry 5 GEISHA Id SEMA3A.McLennan.2010 Data Source Publication Complete cDNA Template Probe show GCTGATGGAAGACTTTGTTACTTGTTTCTAGCTGGGAGCGACCCAAAGAGGATTATGTTATGGGCAGAAGATGTTATTT ATGTTGCCTGAAGTTCCCCGGCGGCGCCCGGCAGGACGGGGAGCGCCGCGGCTCCGGCTCGCAGGGACCCTACAGTGGC TGCTGCAGCATGGGCTGGCTCAGGGGGATTGCCTTGCTTTCCTTGGGAGTATTACTAGCAGGAAGAGTGAACTGCCAGC ATGTGAAGAATAACGTGCCAAGACTCAAATTATCCTATAAAGAAATGTTGGAATCCAATAATATAGTCAATTTCAATGG ACTAGCTAATAGTTCCAGTTACCATACTTTCCTCTTGGATGAAGAACGAAGTCGGCTGTATGTTGGAGCAAAAGACCAC ATATTTTCTTTCAACCTGGTTAACATCAAGGAATATCAAAAGATTGTTTGGCCTGTATCTCATTCCCGAAGGGATGAGT GTAAGTGGGCTGGAAAAGATATTCTGAGAGAATGTGCTAATTTCATCAAGGTGCTTAAGACTTATAACCAAACACACTT GTACGCTTGTGGAACGGGGGCTTTTCATCCCATGTGCACTTATATTGAAGTTGGAAGCCATCCTGAGGACAACATTTTT AGGATGGAAGATTCACATTTTGAAAACGGCCGAGGGAAAAGCCCTTACGATCCTAAATTGCTGACAGCTTCTCTTTTAG TAGATGGAGAATTGTACTCTGGCACAGCAGCAGACTTCATGGGCAGAGACTTTGCCATTTTCCGAACTCTGGGGCATCA CCATCCAATCAGAACAGAGCAGCATGACTCCCGGTGGCTAAACGATCCCAGATTTATTAGTGCTCACCTGATACCTGAA AGTGATAATCCAGAAGATGACAAAATCTATTTCTTCTTTCGTGAAAATGCGATTGATGGAGAGCACACTGGAAAAGCCA CTCATGCCAGAATAGGGCAGATCTGTAAGAATGACTTTGGTGGACACAGGAGCCTTGTTAACAAATGGACAACTTTCCT CAAAGCACGTCTGATTTGTTCTGTGCCAGGACCCAATGGTATTGACACACACTTTGATGAATTACAGGACGTGTTCCTA ATGAACTCTAAGGACCCTAAAAATCCAATAGTGTATGGAGTGTTTACAACTTCCAGTAATATCTTCAAGGGATCAGCAG TATGTATGTACAGCATGACTGATGTGAGGAGGGTATTTCTTGGCCCCTATGCCCACCGAGATGGCCCAAACTACCAGTG GGTTCCCTACCAAGGGCGAGTTCCATATCCACGGCCAGGAACTTGCCCCAGTAAAACATTTGGCGGCTTTGACTCCACC AAGGACCTTCCTGATGAAGTTATAACATTTGCAAGAAGTCATCCTGCCATGTATAACCCAGTATTCCCCATCAACAGCC GTCCAATCATGATCAAAACGGATGTAGATTACCAGTTCACACAGATAGTAGTAGATCGAGTAGATGCAGAAGATGGTCA ATACGATGTTATGTTCATTGGCACAGATATTGGAACAGTTCTTAAAGTGGTTTCCATTCCTAAGGAGACTTGGCATGAA TTAGAAGAAGTCTTGCTGGAAGAAATGACCGTCTTTCGGGAACCCACTGTTATTTCAGCAATGAAGATTTCCACAAAAC AGCAACAGCTCTACATTGGCTCAGCCACCGGAGTTTCACAGCTTCCTTTACACCGCTGTGATGTCTATGGAAAAGCATG TGCTGAGTGTTGTCTTGCAAGAGACCCCTACTGCGCCTGGGATGGTTCATCTTGCTCACGTTACTTTCCCACTGCTAAG AGACGTACTAGGCGACAAGACATCCGAAATGGAGATCCCCTCACTCACTGCTCAGACCTGCAGCATCATGATAACCCAA GTGGTCAGACCCTGGAGGAAAAGATTATTTATGGAGTAGAGAATAGCAGCACTTTTCTTGAGTGCAGTCCAAAATCTCA ACGTGCCATAGTCTACTGGCAATTCCAGAAGCAAAATGATGACCACAAAGTTGAGATAAAAGTGGATGATCGAATGATC CGGACAGAACAGGGCCTATTGCTACGAAGTCTTCAACGGAGAGACTCTGGTATTTATTTTTGTCATGCTGTGGAGCATG GCTTCATTCAAACTTTGCTCAAAGTGACACTGGAAGTAATTGATACTGACCACTTGGAAGAGCTGCTCCATAAGGAAGA AGACGCCGATGCCTCCAAGACCAAGGATGCTACCAATAGCATGACTCCTAGTCAAAAGATCTGGTATAGAGACTTCATG CAGTTAATCAATCACCCCAATCTCAACACAATGGATGAATTCTGTGAGCAGGTTTGGAAAAGAGACCGCAAGCAGCGCC GGCAAAGGCCTGCCAATGCGCAGGTGAACACAAATAAGTGGAAGCACCTACAAGAGAATAAAAAAGGTAGGAATAGGAG GACCCATGAATTTGAGAGGGCACCACGGAGTGTCTGAGCTACATTACCTCTAGAAACCTCATCTAAGTAGAAACTTGTA TAGACAGATAACTGGAAAAAAAATGCAATATACATGAACTTTTTCATGGCATTAAGTGGATGTTTACAAGAGTTGAAAG CTCAAACAATTTCCACCGGGTTTAAATACAATATATTTCTAACTTTCCTAGTAAGTCCTTCGTCTCTGCTCTGATTCTA AGACCAGGTAGACCAGAGTTTCAAGGATGAACACTCAGCTGGACATAGCTTACTGCTCAAAAAGTTCTACAAGAGTTCA GCAGGCAGGTTTTGCTTTCTCTGTTGCCTGAGATATAAATGAAATGCTGTATTTCATGCTGTCGTCTTCAAGAAAAACA AAACCCACTTTTCATCATCAGCACCACCATTCCTAGACTATGTATAAAACTGCATGAACTCATTAAGCTGATGAATGTC TAAACACGTGATTGGACACAAGGATTTGTTCTTGTTTTGTCTACCAGTTCTCCTGTTTATGAGTACTAGAAGAGGAAAA ACAATGCTGAATGAGATTGCGGAAATCTTAACAACATAAGCCATTCATCATCTAGAAGAACAAAAAAATGTGGAGTACA CTGGCCTACTACTGATGACTTCTTTCAGCTTTGATCTAAAGATGTATTTTATTAAAACTATAATTTAAATATACCATGA AAAATATGCAGCAAACATTAGCTCTTTTCTAAAATAGATTAGCCTCTTTGTCTTAGAAATATTGTACTTCCTAATTATT GGTTTAGAGGGGAAAAAAAAAAAA
Citation McLennan R, Teddy JM, Kasemeier-Kulesa JC, Romine MH, Kulesa PM., Vascular endothelial growth factor (VEGF) regulates cranial neural crest migration in vivo. Dev Biol. 2010 Mar 1;339(1):114-25. Epub 2009 Dec 28. Copyright Copyright © 2009 Elsevier Inc. All rights reserved. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204977.1 ).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-12 stage 12
13-16 stage 14
stage 14
stage 16
stage 16
stage 16
Dermomyotome Notochord
Entry 6 GEISHA Id SEMA3A.Masuda.2012 Data Source Publication Complete cDNA Template Probe show GCTGATGGAAGACTTTGTTACTTGTTTCTAGCTGGGAGCGACCCAAAGAGGATTATGTTATGGGCAGAAGATGTTATTT ATGTTGCCTGAAGTTCCCCGGCGGCGCCCGGCAGGACGGGGAGCGCCGCGGCTCCGGCTCGCAGGGACCCTACAGTGGC TGCTGCAGCATGGGCTGGCTCAGGGGGATTGCCTTGCTTTCCTTGGGAGTATTACTAGCAGGAAGAGTGAACTGCCAGC ATGTGAAGAATAACGTGCCAAGACTCAAATTATCCTATAAAGAAATGTTGGAATCCAATAATATAGTCAATTTCAATGG ACTAGCTAATAGTTCCAGTTACCATACTTTCCTCTTGGATGAAGAACGAAGTCGGCTGTATGTTGGAGCAAAAGACCAC ATATTTTCTTTCAACCTGGTTAACATCAAGGAATATCAAAAGATTGTTTGGCCTGTATCTCATTCCCGAAGGGATGAGT GTAAGTGGGCTGGAAAAGATATTCTGAGAGAATGTGCTAATTTCATCAAGGTGCTTAAGACTTATAACCAAACACACTT GTACGCTTGTGGAACGGGGGCTTTTCATCCCATGTGCACTTATATTGAAGTTGGAAGCCATCCTGAGGACAACATTTTT AGGATGGAAGATTCACATTTTGAAAACGGCCGAGGGAAAAGCCCTTACGATCCTAAATTGCTGACAGCTTCTCTTTTAG TAGATGGAGAATTGTACTCTGGCACAGCAGCAGACTTCATGGGCAGAGACTTTGCCATTTTCCGAACTCTGGGGCATCA CCATCCAATCAGAACAGAGCAGCATGACTCCCGGTGGCTAAACGATCCCAGATTTATTAGTGCTCACCTGATACCTGAA AGTGATAATCCAGAAGATGACAAAATCTATTTCTTCTTTCGTGAAAATGCGATTGATGGAGAGCACACTGGAAAAGCCA CTCATGCCAGAATAGGGCAGATCTGTAAGAATGACTTTGGTGGACACAGGAGCCTTGTTAACAAATGGACAACTTTCCT CAAAGCACGTCTGATTTGTTCTGTGCCAGGACCCAATGGTATTGACACACACTTTGATGAATTACAGGACGTGTTCCTA ATGAACTCTAAGGACCCTAAAAATCCAATAGTGTATGGAGTGTTTACAACTTCCAGTAATATCTTCAAGGGATCAGCAG TATGTATGTACAGCATGACTGATGTGAGGAGGGTATTTCTTGGCCCCTATGCCCACCGAGATGGCCCAAACTACCAGTG GGTTCCCTACCAAGGGCGAGTTCCATATCCACGGCCAGGAACTTGCCCCAGTAAAACATTTGGCGGCTTTGACTCCACC AAGGACCTTCCTGATGAAGTTATAACATTTGCAAGAAGTCATCCTGCCATGTATAACCCAGTATTCCCCATCAACAGCC GTCCAATCATGATCAAAACGGATGTAGATTACCAGTTCACACAGATAGTAGTAGATCGAGTAGATGCAGAAGATGGTCA ATACGATGTTATGTTCATTGGCACAGATATTGGAACAGTTCTTAAAGTGGTTTCCATTCCTAAGGAGACTTGGCATGAA TTAGAAGAAGTCTTGCTGGAAGAAATGACCGTCTTTCGGGAACCCACTGTTATTTCAGCAATGAAGATTTCCACAAAAC AGCAACAGCTCTACATTGGCTCAGCCACCGGAGTTTCACAGCTTCCTTTACACCGCTGTGATGTCTATGGAAAAGCATG TGCTGAGTGTTGTCTTGCAAGAGACCCCTACTGCGCCTGGGATGGTTCATCTTGCTCACGTTACTTTCCCACTGCTAAG AGACGTACTAGGCGACAAGACATCCGAAATGGAGATCCCCTCACTCACTGCTCAGACCTGCAGCATCATGATAACCCAA GTGGTCAGACCCTGGAGGAAAAGATTATTTATGGAGTAGAGAATAGCAGCACTTTTCTTGAGTGCAGTCCAAAATCTCA ACGTGCCATAGTCTACTGGCAATTCCAGAAGCAAAATGATGACCACAAAGTTGAGATAAAAGTGGATGATCGAATGATC CGGACAGAACAGGGCCTATTGCTACGAAGTCTTCAACGGAGAGACTCTGGTATTTATTTTTGTCATGCTGTGGAGCATG GCTTCATTCAAACTTTGCTCAAAGTGACACTGGAAGTAATTGATACTGACCACTTGGAAGAGCTGCTCCATAAGGAAGA AGACGCCGATGCCTCCAAGACCAAGGATGCTACCAATAGCATGACTCCTAGTCAAAAGATCTGGTATAGAGACTTCATG CAGTTAATCAATCACCCCAATCTCAACACAATGGATGAATTCTGTGAGCAGGTTTGGAAAAGAGACCGCAAGCAGCGCC GGCAAAGGCCTGCCAATGCGCAGGTGAACACAAATAAGTGGAAGCACCTACAAGAGAATAAAAAAGGTAGGAATAGGAG GACCCATGAATTTGAGAGGGCACCACGGAGTGTCTGAGCTACATTACCTCTAGAAACCTCATCTAAGTAGAAACTTGTA TAGACAGATAACTGGAAAAAAAATGCAATATACATGAACTTTTTCATGGCATTAAGTGGATGTTTACAAGAGTTGAAAG CTCAAACAATTTCCACCGGGTTTAAATACAATATATTTCTAACTTTCCTAGTAAGTCCTTCGTCTCTGCTCTGATTCTA AGACCAGGTAGACCAGAGTTTCAAGGATGAACACTCAGCTGGACATAGCTTACTGCTCAAAAAGTTCTACAAGAGTTCA GCAGGCAGGTTTTGCTTTCTCTGTTGCCTGAGATATAAATGAAATGCTGTATTTCATGCTGTCGTCTTCAAGAAAAACA AAACCCACTTTTCATCATCAGCACCACCATTCCTAGACTATGTATAAAACTGCATGAACTCATTAAGCTGATGAATGTC TAAACACGTGATTGGACACAAGGATTTGTTCTTGTTTTGTCTACCAGTTCTCCTGTTTATGAGTACTAGAAGAGGAAAA ACAATGCTGAATGAGATTGCGGAAATCTTAACAACATAAGCCATTCATCATCTAGAAGAACAAAAAAATGTGGAGTACA CTGGCCTACTACTGATGACTTCTTTCAGCTTTGATCTAAAGATGTATTTTATTAAAACTATAATTTAAATATACCATGA AAAATATGCAGCAAACATTAGCTCTTTTCTAAAATAGATTAGCCTCTTTGTCTTAGAAATATTGTACTTCCTAATTATT GGTTTAGAGGGGAAAAAAAAAAAA
Citation Masuda T, Sakuma C, Taniguchi M, Kanemoto A, Yoshizawa M, Satomi K,
Development of the dorsal ramus of the spinal nerve in the chick embryo: a close relationship between development and expression of guidance cues. Brain Res. 2012 Oct 22;1480:30-40. .
Copyright Copyright © 2012 Elsevier B.V. All rights reserved Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204977.1).
Entry 7 GEISHA Id SEMA3A.Ferrario.2012 Data Source Publication Complete cDNA Template Probe show GCTGATGGAAGACTTTGTTACTTGTTTCTAGCTGGGAGCGACCCAAAGAGGATTATGTTATGGGCAGAAGATGTTATTT ATGTTGCCTGAAGTTCCCCGGCGGCGCCCGGCAGGACGGGGAGCGCCGCGGCTCCGGCTCGCAGGGACCCTACAGTGGC TGCTGCAGCATGGGCTGGCTCAGGGGGATTGCCTTGCTTTCCTTGGGAGTATTACTAGCAGGAAGAGTGAACTGCCAGC ATGTGAAGAATAACGTGCCAAGACTCAAATTATCCTATAAAGAAATGTTGGAATCCAATAATATAGTCAATTTCAATGG ACTAGCTAATAGTTCCAGTTACCATACTTTCCTCTTGGATGAAGAACGAAGTCGGCTGTATGTTGGAGCAAAAGACCAC ATATTTTCTTTCAACCTGGTTAACATCAAGGAATATCAAAAGATTGTTTGGCCTGTATCTCATTCCCGAAGGGATGAGT GTAAGTGGGCTGGAAAAGATATTCTGAGAGAATGTGCTAATTTCATCAAGGTGCTTAAGACTTATAACCAAACACACTT GTACGCTTGTGGAACGGGGGCTTTTCATCCCATGTGCACTTATATTGAAGTTGGAAGCCATCCTGAGGACAACATTTTT AGGATGGAAGATTCACATTTTGAAAACGGCCGAGGGAAAAGCCCTTACGATCCTAAATTGCTGACAGCTTCTCTTTTAG TAGATGGAGAATTGTACTCTGGCACAGCAGCAGACTTCATGGGCAGAGACTTTGCCATTTTCCGAACTCTGGGGCATCA CCATCCAATCAGAACAGAGCAGCATGACTCCCGGTGGCTAAACGATCCCAGATTTATTAGTGCTCACCTGATACCTGAA AGTGATAATCCAGAAGATGACAAAATCTATTTCTTCTTTCGTGAAAATGCGATTGATGGAGAGCACACTGGAAAAGCCA CTCATGCCAGAATAGGGCAGATCTGTAAGAATGACTTTGGTGGACACAGGAGCCTTGTTAACAAATGGACAACTTTCCT CAAAGCACGTCTGATTTGTTCTGTGCCAGGACCCAATGGTATTGACACACACTTTGATGAATTACAGGACGTGTTCCTA ATGAACTCTAAGGACCCTAAAAATCCAATAGTGTATGGAGTGTTTACAACTTCCAGTAATATCTTCAAGGGATCAGCAG TATGTATGTACAGCATGACTGATGTGAGGAGGGTATTTCTTGGCCCCTATGCCCACCGAGATGGCCCAAACTACCAGTG GGTTCCCTACCAAGGGCGAGTTCCATATCCACGGCCAGGAACTTGCCCCAGTAAAACATTTGGCGGCTTTGACTCCACC AAGGACCTTCCTGATGAAGTTATAACATTTGCAAGAAGTCATCCTGCCATGTATAACCCAGTATTCCCCATCAACAGCC GTCCAATCATGATCAAAACGGATGTAGATTACCAGTTCACACAGATAGTAGTAGATCGAGTAGATGCAGAAGATGGTCA ATACGATGTTATGTTCATTGGCACAGATATTGGAACAGTTCTTAAAGTGGTTTCCATTCCTAAGGAGACTTGGCATGAA TTAGAAGAAGTCTTGCTGGAAGAAATGACCGTCTTTCGGGAACCCACTGTTATTTCAGCAATGAAGATTTCCACAAAAC AGCAACAGCTCTACATTGGCTCAGCCACCGGAGTTTCACAGCTTCCTTTACACCGCTGTGATGTCTATGGAAAAGCATG TGCTGAGTGTTGTCTTGCAAGAGACCCCTACTGCGCCTGGGATGGTTCATCTTGCTCACGTTACTTTCCCACTGCTAAG AGACGTACTAGGCGACAAGACATCCGAAATGGAGATCCCCTCACTCACTGCTCAGACCTGCAGCATCATGATAACCCAA GTGGTCAGACCCTGGAGGAAAAGATTATTTATGGAGTAGAGAATAGCAGCACTTTTCTTGAGTGCAGTCCAAAATCTCA ACGTGCCATAGTCTACTGGCAATTCCAGAAGCAAAATGATGACCACAAAGTTGAGATAAAAGTGGATGATCGAATGATC CGGACAGAACAGGGCCTATTGCTACGAAGTCTTCAACGGAGAGACTCTGGTATTTATTTTTGTCATGCTGTGGAGCATG GCTTCATTCAAACTTTGCTCAAAGTGACACTGGAAGTAATTGATACTGACCACTTGGAAGAGCTGCTCCATAAGGAAGA AGACGCCGATGCCTCCAAGACCAAGGATGCTACCAATAGCATGACTCCTAGTCAAAAGATCTGGTATAGAGACTTCATG CAGTTAATCAATCACCCCAATCTCAACACAATGGATGAATTCTGTGAGCAGGTTTGGAAAAGAGACCGCAAGCAGCGCC GGCAAAGGCCTGCCAATGCGCAGGTGAACACAAATAAGTGGAAGCACCTACAAGAGAATAAAAAAGGTAGGAATAGGAG GACCCATGAATTTGAGAGGGCACCACGGAGTGTCTGAGCTACATTACCTCTAGAAACCTCATCTAAGTAGAAACTTGTA TAGACAGATAACTGGAAAAAAAATGCAATATACATGAACTTTTTCATGGCATTAAGTGGATGTTTACAAGAGTTGAAAG CTCAAACAATTTCCACCGGGTTTAAATACAATATATTTCTAACTTTCCTAGTAAGTCCTTCGTCTCTGCTCTGATTCTA AGACCAGGTAGACCAGAGTTTCAAGGATGAACACTCAGCTGGACATAGCTTACTGCTCAAAAAGTTCTACAAGAGTTCA GCAGGCAGGTTTTGCTTTCTCTGTTGCCTGAGATATAAATGAAATGCTGTATTTCATGCTGTCGTCTTCAAGAAAAACA AAACCCACTTTTCATCATCAGCACCACCATTCCTAGACTATGTATAAAACTGCATGAACTCATTAAGCTGATGAATGTC TAAACACGTGATTGGACACAAGGATTTGTTCTTGTTTTGTCTACCAGTTCTCCTGTTTATGAGTACTAGAAGAGGAAAA ACAATGCTGAATGAGATTGCGGAAATCTTAACAACATAAGCCATTCATCATCTAGAAGAACAAAAAAATGTGGAGTACA CTGGCCTACTACTGATGACTTCTTTCAGCTTTGATCTAAAGATGTATTTTATTAAAACTATAATTTAAATATACCATGA AAAATATGCAGCAAACATTAGCTCTTTTCTAAAATAGATTAGCCTCTTTGTCTTAGAAATATTGTACTTCCTAATTATT GGTTTAGAGGGGAAAAAAAAAAAA
Citation Ferrario JE, Baskaran P, Clark C, Hendry A, Lerner O, Hintze M, Allen J, Chilton JK, Guthrie S. Axon guidance in the developing ocular motor system and Duane retraction syndrome depends on Semaphorin signaling via alpha2-chimaerin.
Proc Natl Acad Sci U S A. 2012 Sep 4;109(36):14669-74.
Copyright Copyright © 2012 National Academy of Sciences. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204977.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24 stage 24
stage 24
stage 24
Head Mesenchyme Rhombomeres 25-29 stage 29
stage 29
stage 29
stage 29
Eye
Mouse Frog Fruit Fly Zebra Finch Zebrafish