GEISHA - A Chicken Embryo Gene Expression Database
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SEMA3E
semaphorin 3E

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolSEMA3E
Official Full Namesemaphorin 3E
CGNC ID6454
also known assemaphorin-3E, semaphorin-3E|COLL-5|collapsin-5|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204242
PolypeptideNP_989573
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.136
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human9723ENSG00000170381MIM:214800MIM:608166
Mouse20349ENSMUSG00000063531All phenotypic alleles (5):Targeted, knock-out(1) Targeted, other(3) Gene trapped(1) MGI:1340034
Xenopus100494277922951
Zebrafish565658ENSDARG00000036571ZDB-GENE-030131-7864ZFIN:ZDB-GENE-030131-7864
Gene Ontology
Molecular Functionreceptor activity
Biological Processangiogenesis, cell differentiation, nervous system development
Cellular Componentextracellular region, membrane
Links to other databases
Entrez Gene374089
Ensembl Gene
KEGGgga:374089
GEISHA IdSema3E.Riley.2010Data SourcePublication
Complete cDNA Template Probeshow
GTGAAGAGAGCAAGATTTTTCATGTTGGGCAGGATGGCATCTGCCCAGGACCTTTTAATTCTGGCACTATGTGGCTTGT
TACTAGAGTTACCGGCTGGATATCACGCAACAGATACGAGACAGCCAAGGTTACGTCTGTCACATAAAGAGCTCTGGGA
TTTAAACAGGACGTCAGTCTTTCATAGCCCATTTGGGTATCTTGGTCTTCATATAATGCTCCTGGATGAATATCAAGAG
CGACTGTTCGTGGGAGGAAGAGACCTCTTGTACTCCCTCAGTTTGGATCGAATCAGCAACAACTATCGAGAGATCCATT
GGCCTAGTACACCTCTTCAAGCAGAAGAATGCATAATTAAAGGAAGAGATGCTGATGAATGTGCTAATTATGTCCGTGT
CCTTCACCGATACAATAGAACGCATCTTCTGGCTTGTGGAACAGGAGCTTTTGATCCAGTTTGTACGTTTATAAGAGTT
GGACATCCATCAGAGGATCATCTGTTTCAACTGGAATCGCACAAATTTGAGAGAGGACGAGGCAGGTGCCCTTTTGACC
CTACTTCTTCCTTCACTTCCATCTTAATTGGTGGTGAACTTTTTACTGGTCTCTACAGTGACTACTGGGGAAGAGATGC
TGCTGTCTTTCGCACCATGAATCGTATGGCACATCTCCGAACTGAACCTGATAGTGAGCACCTGCTGAAAGAACCGAAG
TTTGTTGGTTCATACATGATTCCTGACAATGAAGACCATGACGATAACAAAGTGTATCTCTTTTTTACTGAAAAAGCAT
TAGAGGCTGAGACAAGCACTCATGCCATTTACACCAGAGTGGGACGCGTGTGTGTGAATGATATGGGAGGACAGCGGAT
CGTTGTGAATAAATGGAGCACTTTCCTCAAAACCAGACTAGTTTGTTCTGTGCCTGGGAGAAATGGAATTGATACGCAT
TTTGATGAATTAGAGGATGTGTTTTTGCTGCAAACTCGTGATAACAAAAATCCAGTGATATTTGGCCTCTTCAGCACTA
CAAGCAATATATTTAGAGGATATGCTATATGTGTTTACCATATGGCAATCGTCCGAGCAGCTTTCAATGGACCATATGC
TCATAAAGAAGGACCAGAATACTACTGGGCTCTGTACGAAGGGAAAGTACCTTATCCTAGGCCTGGTTCATGTGCCAGC
AAAGTGAATGGCGGTCTGTACACTACCACCAAAGACTACCCTGATGAAGCTGTCCATTTTGCCAGGAGTCATCCACTAA
TGTATCAGCCCATCAAGCCTGTTCATAAAAGACCAATTCTAGTAAAAACAGATGGGAAGTACAACCTTAAGCAAATAGC
TGTGGACAGAGTGGAAGCTGAAGACGGGCAATATGATGTGTTGTTCATTGGCACAGATAATGGAATTGTGCTGAAAGTC
ATTACAATTTACAATCAAGAGACAGAATCAATGGAAGAAGTGATTCTTGAAGAGCTGCAAGTATTCAAGGTGCCAATTC
CTATTCTTTCCATGGAAATCTCTTCAAAAAGGCAACAGCTCTACATTGGAACTGAGTCAGTCATAGCACAAGTGAAGTT
TCACCAGTGTGACATGTATGGCACAGCCTGTGCTGACTGCTGCCTGGCTCGAGATCCCTACTGTGCTTGGGATGGCATC
TCCTGCTCCCGGTACTACCCCACAGGAATGCAGGCAAAGAGACGCTTCCGCAGACAAGATGTACGACATGGAAATGCAG
CTCAGCAGTGCTTTGGCCAGCAGTTCATTGGAGAAGTCCTGGAGAAGACTGAGGAGCGATTGGTTTATGGAATAGAGTA
CAATAGCACCCTTCTGGAGTACACCCCTCGGACCTTACAGGCAAAAGTAAACTGGTTTGTACAGCGAGCCCATGAAACT
AAGAAGGAAGAGGTGAAGACAGATGAAAGAATAATCAAAATGGACCTCGGCCTCTTATTTCTGAAGCTGCATCGGCTGG
ATGCAGGGACTTATTTTTGTCAGACAGTGGAACACAGCATAGTTCACACTGTTAGAAAAATCACCCTGGAAATAGTTGA
GGAAGAACGTGTAGATGAAATGTTCAGTAAAGACTATGAGGAGGAGATATCTCACAAAATGCCATGCCCAATGCAGAGC
AACATACCTCAGGTATCAAAACCATGGTACAAAGAATTTCTTCAACTGATAGGTTACAGCAACTTCCAGAGAGTGGAGG
AGTACTGTGAAAAAGTCTGGTGTACAGATAAGAAGAGAAAAAAGCTGAAAATGTCTCCATCCAAGTGGAAATATGCCAA
TCCTCAGGAGAAGAGGCAGGATCAGGAGAAGAAGGCAAGGATCAGGCCAGAGCACTACCGGTTGCCGAGGAACATAGCT
GACTCTTGATGGACAAAATCCATCTGCTGTTTCTGGGCAAAATTTTACTTGGACTTCAGTAAGAGGGAAAAATCAGATT
GGTTTTGGTAAATGAAACAGGTTTATATGTATAACATTTCAGGACTGAAAACAAATACCCTATGGTAAGTTATCTGTAC
ACTCATGACTGTTTAGAAGCATTTTACACAAAATCCTACCTGTTTCTAAGTAGGTCAATACATCAGAGTTTGCTTTGGG
AGGACATG
CitationRiley KL, Gledhill S, Schubert FR. Early expression of axon guidance molecules in the embryonic chick mesencephalon and pretectum. Int J Dev Biol. 2010;54(4):743-53.
CommentsNot expressed in the midbrain, in contrast to other semaphorins.
no images
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.136

Mouse

EmageMGI:1340034
EurexpressMGI:1340034
MGI GXDMGI:1340034

Frog

Xenbase922951

Fruit Fly

BDGP

Zebra Finch

ZEBrASEMA3E

Zebrafish

ZFINZDB-GENE-030131-7864
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