GEISHA - A Chicken Embryo Gene Expression Database
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TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor

Gene
Official SymbolTAL1
Official Full NameTAL bHLH transcription factor 1, erythroid differentiation factor
CGNC ID16227
also known asSCL, T-cell acute lymphocytic leukemia protein 1 homolog|Avian SCL|T-cell acute lymphocytic leukemia 1|TAL-1|stem cell protein
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205352
PolypeptideNP_990683
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.752
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human6886ENSG00000162367MIM:187040MIM:187040
Mouse21349ENSMUSG00000028717All phenotypic alleles (9):Targeted, knock-out(2) Targeted, other(7) MGI:98480
Xenopus100196924, 398028479826
Zebrafish30766ENSDARG00000019930ZDB-GENE-980526-501ZFIN:ZDB-GENE-980526-501
Gene Ontology
Molecular Functionchromatin binding, E-box binding, histone deacetylase binding, protein dimerization activity, more...RNA polymerase II transcription factor binding, sequence-specific DNA binding transcription factor activity
Biological Processbasophil differentiation, erythrocyte differentiation, megakaryocyte differentiation, more...positive regulation of cell division, positive regulation of chromatin assembly or disassembly, positive regulation of erythrocyte differentiation, positive regulation of mitotic cell cycle, positive regulation of protein complex assembly, positive regulation of transcription from RNA polymerase II promoter, transcription, DNA-templated
Cellular Componenthistone deacetylase complex, Lsd1/2 complex, nuclear chromatin, nucleus, transcription factor complex
Links to other databases
Entrez Gene396298
Ensembl Gene
KEGGgga:396298

Entry 1

GEISHA Idpgp2n.pk003.k22Data SourceGEISHA ISH Analysis
Reverse cDNA Template Probeshow
GACAGTCTCAATCCTTTTAATAGTTCTTTTGCTGAGGGCATTTTCACCTCATTAAAAAGATACAGTCAGAAGGTCTTGG
TCAACGGGAGCATGGCTCGGACCAGTTGCTTGTGCTCCACAGCCCTATGTTTCATTCCTCATGTCCCAGCCGTGCGACT
GCTTGAGAAGTGACCCTCAGGTGGCCCCAAAAACCCTCAGAATGCCGGAGGGGTGCTGGCCACATTCCCCTCCTGTCCT
TAGAATCAGTATGTACAACGAAGACGACTTCAATGCTTTTCTTCTTCGTACGATCCCGTACCTAAACACCGAGCGTCCA
TCCCATTCGGTTGGCCAACGTGCCAACCTGGGCCGAGAGGACGGGGAGCCAAGGGCCGGGTCCCAAATCCCACCCGCCT
GGGTCTCGCCACCCTCTGAGCGCTCGGGGAGCGATTTGGGGTCATCACCGCTGTGCGCTGCCTTCGACGGGGAGGATGG
TGTGGTGCAGGTTCCGTGCGTGCTTGGAGTCGAGCGTGTCGTGCTCCTCCGTGAAGCTGTCCGGGCTCGCCGCTCCATC
CAAAGAGCTTCCACAGCTGGAGTTCGGAGACAGCATGTCCTGCAGGAGGTCTTCCTGGACTATCCCCGAGTCTTTGTTC
ACTTTGCCCCTTTGGTTTCCTTCCTCCTCCTGGTCGTTGAGCAGCTTGGCCAGGAAGTTGATGTATTTCATAGCCAGGC
GCAAGATC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Blood Islands
Blood Vessels
 
7-12
stage 7
stage 8
stage 9
stage 10
Blood Islands
Blood Vessels
 
19-24
stage 22
stage 22
stage 22
stage 23
stage 23
stage 23
stage 23
Amnion
Aorta
Head Mesenchyme
Heart
Outflow Tract
Spinal Cord
 
25
stage 25
stage 25
Allantois
Blood Vessels
Endocardium
Head Mesenchyme
Hindbrain
Midbrain
Surface Ectoderm
 

Entry 2

GEISHA IdScl.Minko.2003Data SourcePublication
Complete cDNA Template Probeshow
CAACCCCGACCCCATCCGGAATCTCCTTCCCGGGGATTCAAATCCAAAAAAAAACCCACCTGATTCAGCCCCAAAATAT
GCTTTAGCAGTTTTATCCCGATGCGGGTGTCCTTCCTCTCTGTAAAGTCGTAAGTACCTCGAGGTGGGAGGAGTAAATT
CAGCCTGACACTGAGAGCGCTTTTGTTGAAACGGGAGAGACTCGCGGTGTCCCTACTTAAATATGACACATGACGATGG
ACAGGCCGCCCGCCCCGCCGCCCCCCAGCAGTGACCCCCGCGATGCCCGCCGCCACGACCCCGAAGCGGACGCCACGAG
CGAGCCCGACAGCAGCCGCGGGGGCATGGAGCCGCCGGCCGAGCCCCAGCTGCTGCTCAACGGGGCGGCCAAAGAGGCG
GGCCGACCCTCCCCCGGGCCCCCCGCCGCCGCCGTGCCCGTCATCGAGCTGGTGCGCCGGGGGGGCTCCTTGGACATAA
AAAGCCGAGAGGCGGCGGGGGAGGCGATGCAGAGAGCGCCGGGCGCCGAGCCGTGCCGCGCCGCCGAAGCCGCCTGCGA
AGCCCGCATGGTGCAGCTGAGCCCCCCCGCGCTGCCGCTGCAGCCCCCCGGCAGGGCCATGCTCTACAACCTGGGGCAA
CCGCTGGGCACCATCGGCAGCGGGTTCTTCGGCGAGCCGGACTCCTTCTCCATGTACGGCAGCAACCGGGTGAAGAGGA
GACCGTCGCCCTACGAGATGGAGATCACCGACGGTCCTCACACGAAGGTGGTCCGCCGCATTTTCACCAACAGCCGGGA
GAGGTGGAGGCAACAGAACGTGAACGGAGCCTTCGCAGAGCTCCGCAAGCTCATCCCCACGCACCCGCCCGACAAAAAG
CTCAGCAAGAACGAGATCTTGCGCCTGGCTATGAAATACATCAACTTCCTGGCCAAGCTGCTCAACGACCAGGAGGAGG
AAGGAAACCAAAGGGGCAAAGTGAACAAAGACTCGGGGATAGTCCAGGAAGACCTCCTGCAGGACATGCTGTCTCCGAA
CTCCAGCTGTGGAAGCTCTTTGGATGGAGCGGCGAGCCCGGACAGCTTCACGGAGGAGCACGACACGCTCGACTCCAAG
CACGCACGGAACCTGCACCACGCCATCCTCCCCGTCGAAGGCAGCGCACAGCGGTGATGACCCCAAATCGCTCCCCGAG
CGCTCAGAGGGTGGCGAGACCCAGGCGGGTGGGATTTGGGACCCGGCCCTTGGCTCCCCGTCCTCTCGGCCCAGGTTGG
CACGTTGGCCAACCGAATGGGATGGACGCTCGGTGTTTAGGTACGGGATCGTACGAAGAAGAAAAGCATTGAAGTCGTC
TTCGTTGTACATACTGATTCTGAGGACAGGAGGGGAATGTGGCCAGCACCCCTCTGGCATTCTGAGGGTTTTTGGGGCC
ACCTGAGGGTCACTTCTCAAGCAGTCGCACGGCTGGGACATGAGGAATGAAACATAGGGCTGTGGAGCACAAGCAACTG
GTCCGAGCCATGCTCCCGTTGACCAAGACCTTCTGACTGTATCTTTTTAATGAGGTGAAAATGCCCTCAGCAAAAGAAC
TATTAAAAGGATTGAGACTGTCTTTTTTCTCTATCTCTACTTTTTTTTTTTTTTTTAATTGTTTTTGTCCCCTTTCCTT
TCCCTTCTACCTAACGTTGGATTGTTTGGGGTGTTGTATTTATGACGTGAGATTCCTTCTGTTCAATGCCGTCATGCAG
TGTCCACTGAACATAAAGGTACATAGGGTGTTCTGTGCTCCCCACCGCCCCCTGAGCCCCCAACCCCAAGCTGTAACAC
AGTGGGTGAGGTCCTGCAGTGGTCTCCTCAAGTTTCCCCAGAGGTTTCTGTAGGGCTGAGCTTCTCTCAAGGAAGATGA
AACTCAGAATAGGTTAAGGAGAGAAAAGTTGACTAGCGATGCCTCCCCTTGAACCAGGGACTTCTTTGAATGAAAAAAA
AAAAAAACCGGAATTC
CitationMinko K, Bollerot K, Drevon C, Hallais MF, Jaffredo T. From mesoderm to blood islands: patterns of key molecules during yolk sac erythropoiesis. Gene Expr Patterns. 2003 Jun;3(3):261-72.
CopyrightReprinted from Gene Expression Patterns, Volume 3, Issue 3, K. Minko, K. Bollerot, C. Drevon, M.F. Hallais, and T. Jaffredo, From mesoderm to blood islands: patterns of key molecules during yolk sac erythropoiesis, Pages 261-272, Copyright 2003, with permission from Elsevier. Copyright © 2003 Elsevier B.V. All rights reserved.
CommentsThe authors said: SCL was provided from Dr. Green, University of Cambridge, UK (Goodwin et al., 1992). Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc #NM_205352).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
stage 4
stage 5
stage 5
stage 6
Area Opaca
Blood Islands
Early Mesoderm
Extraembryonic
Anatomy
7-12
stage 8
stage 8
stage 8
stage 8
stage 8
stage 9
stage 9
stage 9
stage 9
stage 9
Area Opaca
Blood Islands
Early Mesoderm
Anatomy.
13-15
stage 13
stage 13
stage 13
stage 15
stage 15
stage 15
Blood Islands
Blood Vessels
 

Entry 3

GEISHA IdTAL1.Anderson.2019Data SourcePublication
Complete cDNA Template Probeshow
CCGCGGCTCGAGCTACGCCGCTCTGCCTCTGTTTGCAGCGGGTTCTTCGGCGAGCCGGACTCCTTCTCCATGTACGGCA
GCAACCGGGTGAAGAGGAGACCGTCGCCCTACGAGATGGAGATCACCGACGGTCCTCACACGAAGGTGGTCCGCCGCAT
TTTCACCAACAGCCGGGAGAGGTGGAGGCAACAGAACGTGAACGGAGCCTTCGCAGAGCTCCGCAAGCTCATCCCCACG
CACCCGCCCGACAAAAAGCTCAGCAAGAATGAGATCTTGCGCCTGGCTATGAAATACATCAACTTCCTGGCCAAGCTGC
TCAACGACCAGGAGGAGGAAGGAAACCAAAGGGGCAAAGTGAAACAAAGACTCGGGGATAGTCCAGGAAGACCTCCTGC
AGGACATGCTGTCTCCGAACTCCAGCTGTGGAAGCTCTTTGGATGGAGCGGCGAGCCCGGACAGCTTCACGGAGGAGCA
CGACACGCTCGACTCCAAGCACGCACGGAACCTGCACCACGCCATCCTCCCCGTCGAAGGCAGCGCACAGCGGTGATGA
CCCCAAATCGCTCCCCGAGCGCTCAGAGGGTGGCGAGACCCAGGCGGGTGGGATTTGGGACCCGGCCCTTGGCTCCCCG
TCCTCTCGGCCCAGGTTGGCACGTTGGCCAACCGAATGGGATGGACGCTCGGTGTTTAGGTACGGGATCGTACGAAGAA
GAAAAGCATTGAAGTCGTCTTCGTTGTACATACTGATTCTGAGGACAGGAGGGGAATGTGGCCAGCACCCC
CitationAnderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
CopyrightCopyright © 2019 Elsevier Inc. All rights reserved.
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Anderson et al. 2019.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
stage 12
Endocardium
Heart
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.752

Mouse

EmageMGI:98480
EurexpressMGI:98480
MGI GXDMGI:98480

Frog

Xenbase479826

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-980526-501
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