GEISHA - A Chicken Embryo Gene Expression Database
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TGM2
transglutaminase 2

Gene
Official SymbolTGM2
Official Full Nametransglutaminase 2
CGNC ID49801
also known asTGL2, protein-glutamine gamma-glutamyltransferase 2|TG(C)|TGC|TGase C|TGase-2|tissue transglutaminase|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)|transglutaminase C
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_205448
PolypeptideNP_990779
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human7052MIM:190196
Mouse21817ENSMUSG00000037820All phenotypic alleles (6):Targeted, knock-out(3) Targeted, other(3) MGI:98731
Xenopus100170618, 386605, 4438365940893
Zebrafish100331863, 100331147, 100331652, 100331786, 323856, 447909ENSDARG00000074094, ENSDARG00000070157ZDB-GENE-030131-2576, ZDB-GENE-040912-78ZFIN:ZDB-GENE-030131-2576, ZFIN:ZDB-GENE-040912-78
Gene Ontology
Molecular Functionmetal ion binding, protein-glutamine gamma-glutamyltransferase activity
Biological Processpeptide cross-linking
Cellular Component
Links to other databases
Entrez Gene396432
Ensembl GeneENSGALG00000006775
KEGGgga:396432
GEISHA IdTGM2.Kimura.2011Data SourcePublication
Complete cDNA Template Probeshow
GACCGCTACCTGAGCGAGACGGGCATGGAGGAGCGGCGCTCCACGGACATGATCTGGAACTTCCACTGCTGGGTGGAGT
GCTGGATGACCCGGCCTGACCTGGCACCTGGATACGATGGGTGGCAAGCGCTGGACCCCACGCCCCAGGAGAAGAGCGA
AGGGGTTTACTGCTGCGGGCCGGCCCCTGTCAAGGCCATCAAGGAGGGCGACCTGCAGGTGCAGTACGACATCCCCTTC
GTCTTTGCGGAGGTCAATGCTGACGTGGTGTACTGGATCGTTCAGAGTGACGGTGAGAAGAAGAAGAGCACCCACTCCT
CAGTGGTGGGGAAGAACATCAGCACCAAGAGCGTCGGCAGGGACAGCCGCGAGGACATCACCCACACCTACAAGTATCC
GGAGGGGTCTGAGAAGGAGCGAGAGGTGTTCAGCAAGGCGGAGCACGAGAAGAGCTCGCTGGGTGAGCAGGAAGAGGGG
CTCCACATGCGGATCAAGCTGTCGGAGGGTGCCAACAACGGCTCCGACTTCGACGTCTTCGCTTTCATCAGCAACGACA
CGGACAAGGAGCGTGAGTGCAGGCTGAGGCTGTGCGCCCGCACCGCCAGCTACAACGGCGAGGTGGGCCCGCAGTGCGG
CTTCAAGGACCTGCTGAACCTCAGCCTCCAGCCCCACATGGAACAGAGCGTGCCCTTGCGCATCCTCTATGAGCAGTAC
GGGCCCAACCTGACCCAGGACAACATGATCAAGGTGGTGGCTCTGCTGACTGAGTATGAGACTGGTGACAGCGTGGTGG
CCATCAGGGATGTCTACATCCAGAACCCAGAGATCAAGATCAGGATTTTAGGGGAGCCAATGCAGGAGCGGAAGCTGGT
GGCAGAGATCAGACTGGTGAACCCACTGGCAGAGCCACTGAACAACTGCATATTCGTGGTGGAAGGCGCCGGCCTCACT
GAGGGGCAGAGGATCGAGGAGCTTGAGGATCCTGTGGAGCCGCAAGCAGAGGCCAAGTTCCGGATGGAGTTCGTGCCGC
GCCAGGCAGGGCTGCACAAGCTGATGGTGGACTTTGAGAGCGACAAGCTGACGGGAGTGAAGGGCTACCGCAACGTCAT
CATCGCACCCCTGCCCAAGTGAGGGCCCCCCGAGCCCCCACCCTGCTCCAGCCCTGGGCAATGCTGCAGAGAAACAACC
ATAAGCCTTAGCCCAACCTGCACCAAGGGCATGGGACCCCGCACCTCCGAGTACCCACTGCCACCACAGCCCCTCTCCA
TCACTGCCACTCCCAGGGGCCGGGGGACAGTGACAACTGTGGTACTGACAACTGCCAGGGCTGAGCCATGCCTTCTCCT
CCTCTCCCTCCCCATGGAGGTGGACGCAGCCTCCAGCTCGGGGCCCTCCTGCAGCAGCCCAGCAGAAGCCTCGCTCATT
TCTGCAGCTCTAAACACGCCCCTGGGACGCAGAGCACATTTCATAACGCAAACAATAGAAAGACAATCTTCTCCTGCAC
CGATCGCGCAGCAGCAGCACTCATGCCTGCCAGTTAAAATGCTCTGAATGCAATTTGGTAGAGAAAAGATCGTATACTG
TGAGCACAAAGCTGTTTATATGCTATATACACATATAGCATAAATCTATTTATAGCTCTATAAATACATACTGCCGAGA
ACCCTGCTGCA
CitationKimura W, Alev C, Sheng G, Jakt M, Yasugi S, Fukuda K. Identification of region-specific genes in the early chicken endoderm. Gene Expr Patterns. 2011 Mar-Apr;11(3-4):171-80. Epub 2010 Nov 23.
CopyrightCopyright © 2010 Elsevier B.V. All rights reserved.
CommentsThe cDNA template used to generate the probe was obtained by PCR as described 5′-GACCGCTACCTGAGCGAGAC-3′, R, 5′-TGCAGCAGGGTTCTAGGCAG-3′. Note: There is a single nt error in either the primer or the sequence of R.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 11
stage 11
stage 11
Heart Tube
Hindgut
Midgut
 
13-15
stage 15
stage 15
Midgut
 

Mouse

EmageMGI:98731
MGI GXDMGI:98731

Frog

Xenbase5940893

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-2576, ZDB-GENE-040912-78
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