GEISHA - A Chicken Embryo Gene Expression Database
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TMOD1
tropomodulin 1

Gene
Official SymbolTMOD1
Official Full Nametropomodulin 1
CGNC ID49529
also known asE-Tmod, tropomodulin-1, tropomodulin-1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205027
PolypeptideNP_990358
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.2614
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly43633FBgn0082582
Human7111ENSG00000136842MIM:190930
Mouse21916ENSMUSG00000028328All phenotypic alleles (4):Targeted, other(4) MGI:98775
Xenopus100486576954353
Zebrafish100149766ENSDARG00000078318ZDB-GENE-090312-131ZFIN:ZDB-GENE-090312-131
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395883
Ensembl Gene
KEGGgga:395883

Entry 1

GEISHA IdTmod1Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
ATTTTTCCCAAGTGCAGAACTGGAGTGTAGCTCCCAGCCACGGAGGTCATTCCCAGCGGGTCTGTGTTACTGTGACAAC
CTAAAGGCGAGAAAGTGCCTTGACAAGAGTTATTTGTGGTGTCTGGTCTCTGTTATGCACTAACAGTTTAAAGTAACTA
GTGGCTGTAGTTGAAGATTTTTACCCAGTAGCACTGTTGATGTTTTTCTGAGCTGGAAACTATTCAAGCCAGTAACCTG
CCAATGAAGTGCAACCTCAGCTGAGCGTACATCCCGGAGTAAAAGTAACTACGTGAACCTGGGACCTCATTTTTCTATA
AACTTTCTGCACAGTGTTTCATAGAGGTAGGATGTGGTATCCTGAGTGAGGAGTACAACTGTTCCACACAAATTACAGA
AGATATTAGAAAAATACTTTAAAAAAAAAAAAACCCCCAAAACGATCTCAAGTAACTATAGAGGAGCACTATTTTAACA
AGCACTTCTACTATCAGAAACATGGCTAAATGAGAGAATTGCAAAAGTGTACTTTCTTTTTTACCAACACTTGCTGAGT
CACTTAGATAGATGTGCTGCTTTTCAAGCGAATCCCCATGTTTCTCAGAAAAGATTGATCCTCACCCATAGCCGTGCAG
TTAAAGTGAACTTAAGGCCACCAGTTGTGAAATAAGAGTCTCAAAAACTGAGCGCTGGAGAACGGGGTTACTTCTACCC
TGTGTGTGTCTGAATAAAAACATCACTTT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
stage 9
stage 11
stage 11
Blood Vessels
Heart Tube
Sinus Venosus
Yolk Sack or Stalk
 
13-18
stage 14
stage 14
stage 14
stage 16
stage 18
stage 18
Heart
Heart Tube
Myotome
Paraxial Mesoderm
Somites
otic trapping

Entry 2

GEISHA IdTMOD1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTGTTACTGTGACAACCTAAAGGCG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGCAAAGCAGCGAAGAAAGGGGcDNA Template Length831
Forward cDNA Template Probeshow
TTGNTTCAGGGGGAAATCTGGNACATGCACTTTTATTGTCATGAAACTGCGGGGATTAGGAGAGAGGACTCTCATTTAT
GGATCAGGTTTGGCTGTTTCAGGCCAAACTCGGGATTGGCACCAGATCCCTAAAAGTGATGTTTTTATTCAGACACACA
CAGGGTAGAATGATGCTAACCCGTTCTCCAGCGCTCAGTTCTTGAGACTCTTATTTCACAACTGGTGGCCTTAAGTTCA
CTTTAACTGCACGGCTATGGGTGAGGATCAATCTTTTCTGAGAAACATGGGGATTCGCTTGAAAAGCAGCACATCTATC
TAAGTGACTCAGCAAGTGTTGGTAAAAAAGAAAGTACACTTTGCAATTCTCTCATTTAGCCATGTTTCTGAATAGTAGA
AGTGCTTGTTAAAATAGTTGCTCCTCTGTAGTTACTTGAGATCGTTTTGGGGGAAAAAAAAAAAAAAAA
CommentsNo expression detected at or before stage 6.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Unlabeled
 
7-12
stage 7
stage 8
Anterior/Second Heart Field
Lateral Plate Mesoderm
Stage 7+ to 8-.
13-18
stage 15
stage 15
stage 15
Heart Tube
 
19-24
stage 22
stage 22
stage 23
stage 23
Gut
Heart
Myotome
Somatic Mesoderm
Somites
 
25
stage 25
stage 25
Heart
Myotome
Somites
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.2614

Mouse

EmageMGI:98775
EurexpressMGI:98775
MGI GXDMGI:98775

Frog

Xenbase954353

Fruit Fly

BDGPFBgn0082582

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-090312-131
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