GEISHA - A Chicken Embryo Gene Expression Database
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TPR
translocated promoter region, nuclear basket protein

Gene
Official SymbolTPR
Official Full Nametranslocated promoter region, nuclear basket protein
CGNC ID3800
also known asnucleoprotein TPR|translocated promoter region (to activated MET oncogene)
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Sequence Information
Genomic
RNAXM_422300
PolypeptideXP_422300
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly36264FBgn0013756
Human7175ENSG00000047410MIM:189940
Mouse108989ENSMUSG00000006005All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:1922066
Xenopus100496307, 3979846459790
Zebrafish558883ENSDARG00000016630ZDB-GENE-081104-2, ZDB-GENE-030131-6410ZFIN:ZDB-GENE-081104-2, ZFIN:ZDB-GENE-030131-6410
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene424457
Ensembl Gene
KEGGgga:424457
GEISHA IdTPR.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTCCAAGTAAAGTGACTGCTGCGG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGATCTTCAGGGGGTCCAAATCGGcDNA Template Length
Forward cDNA Template Probeshow
CCATGCATGGATCAAGACTCCNCTCCTGAGGGGAAGATTGCTTCGCAAATCCATCTGTACACCTTTAAACTAGAGTTGG
TGTGCTTGGAACTGTTCTGTCCTCATCATCAAAGAAGTGCTGCTGCCTCCCTCCTATACGAGGAGTTAGCTGAAGTCCA
CCTCCCGATGACTGTCTTCGAGTCATCAGGATTCTCTGCACTGGGGGACCTACTTCTTGAGGAGGAGGATGAATTGTTA
ATCGAGGAAGCGATGGATGTGGTGGCCTGCGTGGTGACTGTGGTGGACGAGGGGCCTGTCTCTCTGAAGAAGATGATGG
CTGCTGTTCTCTAGAACTTTGATGAAGGAAAGAGGACTCTGCAGTTCTTGTTCTTTCTTCACAGCTGTTTTAAGAATCT
GCTGCCCTCTGGTTGTTTTCACCTCCTCCCAAGCTTTCCTCTTTTTTTGTTCGAGGAATAGCACCATCATCCCCCTCAG
CATCATCTGCTTCATACCCATCATTACCATCAGTACCACTAGTTTCTTTATTACTATCATCATCTTCATCCCCCAACGC
TGTGTCTTCATCATCATCATCATCTTCCTCTTCCTCGTCTTAATAATCCTGCTGCTCGCCTTCTTTTTCATCATCATCA
TCATCTTCATCATCACTATTAATAAAAAAGTACCTCGTCTCTTCTGGGATGATCTTGCGGAGATGAAGTATTTTTTTGT
ATGATCCTGATGAAGAGGCCCAAGATTTATTGGGATAAAAAGAAAATTTTTCTCATTATCCTTGATGGGAGTGTACTCT
CCCTGTAGAACATCTTTCCCCAAAAACATTTTGATGAACATAGGTTGGAAGTAAGAACTTTCTTTTTCACCATCGCTGT
TTTTCTGCTGGTATTAACTTCCTCCAATAAACCAACCCGATGGGTGCTTTTTATTTTTTTTTGGAAGAAGAACAACCCC
TTTTTCTTTAAAAAATTTGGAACAATTTTCTCAAAGTAGTTATCCCCCTCTTCTCTCGGGGGGAATATAAAACCGAAAA
AAAAGTTTGGGTGGCATGAAATGGTTACAAAAACTGTCTAAAAAAGGTGGGCGTCGTCTTTTTATGAGACTTTGTAACA
CCCACCACCATGGGGGAGATATCTTCTAACACCGCCCCTTTTTTAAATAATATTTGTGAGGGAGGCACACAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Area Pellucida
Early Endoderm
Primitive Streak
 
4-6
stage 4
stage 5
stage 6
Area Pellucida
Extraembryonic Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak
 
7-12
stage 7
stage 8
stage 10
stage 12
Blood Islands
Blood Vessels
Extraembryonic Mesoderm
Head Mesenchyme
Heart
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
HH stage 10+/11-
13-18
stage 13
stage 16
stage 17
Widespread Expression
 
19-24
stage 23
Widespread Expression
 
25
stage 25
Widespread Expression
 

Mouse

EmageMGI:1922066
MGI GXDMGI:1922066

Frog

Xenbase6459790

Fruit Fly

BDGPFBgn0013756

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-081104-2, ZDB-GENE-030131-6410
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