Geisha

home

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

TUBB3
tubulin beta 3 class III

The human orthologue of this gene is associated
with the following human diseases:

Gene

Official Symbol	TUBB3
Official Full Name	tubulin beta 3 class III
CGNC ID	54120
also known as	tubulin beta-4 chain\|beta-4-tubulin\|beta-tubulin class-III
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_001031598
Polypeptide	NP_001026769

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	37888			FBgn0003888
Human	10381	ENSG00000258947	MIM:614039	MIM:602661
Mouse	22152	ENSMUSG00000062380	All phenotypic alleles (2):Targeted, other(2)	MGI:107813
Xenopus	395045, 495319			5886291
Zebrafish

Gene Ontology

Molecular Function	GTP binding, GTPase activity, structural constituent of cytoskeleton
Biological Process	microtubule-based process, protein polymerization
Cellular Component	cytoplasm, microtubule

Links to other databases

Entrez Gene	431043
Ensembl Gene	ENSGALG00000000059
KEGG	gga:431043

Entry 1

GEISHA Id	TUBB3.Domowicz.2008	Data Source	Publication
Complete cDNA Template Probe	show ATGAGGGAGATCGTCCACATCCAAGCGGGGCAATGCGGCAACCAGATCGGCGCCAAGTTCTGGGAGGTGATCAGCGATG AGCATGGCATAGACCCCAGCGGCAACTACGTGGGCGACTCGGACCTGCAGCTGGAACGCATCAGTGTCTATTACAATGA GGCCTCCTCTCACAAGTACGTGCCTCGCGCCATCCTGGTGGATTTGGAGCCGGGCACGATGGACAGCGTGCGCTCGGGT GCCTTCGGGCACCTCTTCCGCCCCGACAACTTCATTTTCGGTCAGAGCGGGGCCGGCAACAACTGGGCCAAGGGGCACT ACACGGAGGGGGCCGAGCTGGTGGACTCGGTGCTGGACGTGGTGCGGAAGGAGTGTGAGAACTGCGACTGCCTGCAGGG CTTCCAGCTGACCCACTCGCTGGGTGGGGGCACGGGCTCGGGCATGGGCACGCTGCTGATCAGCAAGGTGCGCGAGGAG TACCCCGACCGCATCATGAACACTTTCAGCGTGGTGCCGTCCCCCAAGGTGTCGGACACGGTGGTGGAGCCCTACAACG CCACGCTCTCCATCCATCAACTGGTGGAGAACACGGATGAGACCTACTGCATCGACAACGAGGCCCTGTACGACATCTG CTTCCGCACACTCAAGTTGGCCACCCCCACCTACGGAGACCTCAACCACCTCGTCTCGGCCACCATGAGTGGTGTCACC ACCTCGCTGCGCTTCCCCGGGCAGCTCAACGCTGACCTGCGCAAGCTGGCGGTCAACATGGTGCCCTTCCCCCGTCTGC ACTTCTTCATGCCCGGCTTCGCCCCGCTGACGAGGCGTGGCAGCCAGCAGTACCGGGCTCTGACCGTCCCCGAGCTCAC CCAGCAGATGTTTGATGCCAAGAACATGATGGCTGCCTGCGACCCCCGCCACGGCCGCTACCTCACCGTGGCCACCGTC TTCCGCGGCCGCATGTCCATGAAGGAGGTGGACGAGCAGATGTTGGCCATCCAGAGCAAGAACAGCTCCTACTTCGTGG AGTGGATCCCCAACAATGTCAAGGTGGCTGTGTGCGACATCCCGCCCCGCGGCCTCAAGATGTCCTCCACCTTCATCGG CAACAGCACGGCCATCCAGGAGCTCTTCAAGCGCATCTCAGAGCAGTTCACCGCCATGTTCCGCCGCAAGGCCTTCCTG CATTGGTACACGGGAGAGGGGATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAACGACCTGGTGTCGGAGT ACCAGCAGTACCAGGACGCCACGGCCGAGGAGGAGGGCGAGATGTACGAGGATGATGAGGAGGAGTCGGAGCAGGGCGC CAAGTGA
Citation	Domowicz MS, Sanders TA, Ragsdale CW, Schwartz NB. Aggrecan is expressed by embryonic brain glia and regulates astrocyte development. Dev Biol. 2008 Mar 1;315(1):114-24. Epub 2008 Jan 22.
Copyright	Copyright © 2008 Published by Elsevier Inc.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_001031598.1)

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

31-38

stage 34

stage 38

Brainstem Nuclei
Hindbrain

Entry 2

GEISHA Id	TUBB3.Domowicz.2011	Data Source	Publication
Complete cDNA Template Probe	show ATGAGGGAGATCGTCCACATCCAAGCGGGGCAATGCGGCAACCAGATCGGCGCCAAGTTCTGGGAGGTGATCAGCGATG AGCATGGCATAGACCCCAGCGGCAACTACGTGGGCGACTCGGACCTGCAGCTGGAACGCATCAGTGTCTATTACAATGA GGCCTCCTCTCACAAGTACGTGCCTCGCGCCATCCTGGTGGATTTGGAGCCGGGCACGATGGACAGCGTGCGCTCGGGT GCCTTCGGGCACCTCTTCCGCCCCGACAACTTCATTTTCGGTCAGAGCGGGGCCGGCAACAACTGGGCCAAGGGGCACT ACACGGAGGGGGCCGAGCTGGTGGACTCGGTGCTGGACGTGGTGCGGAAGGAGTGTGAGAACTGCGACTGCCTGCAGGG CTTCCAGCTGACCCACTCGCTGGGTGGGGGCACGGGCTCGGGCATGGGCACGCTGCTGATCAGCAAGGTGCGCGAGGAG TACCCCGACCGCATCATGAACACTTTCAGCGTGGTGCCGTCCCCCAAGGTGTCGGACACGGTGGTGGAGCCCTACAACG CCACGCTCTCCATCCATCAACTGGTGGAGAACACGGATGAGACCTACTGCATCGACAACGAGGCCCTGTACGACATCTG CTTCCGCACACTCAAGTTGGCCACCCCCACCTACGGAGACCTCAACCACCTCGTCTCGGCCACCATGAGTGGTGTCACC ACCTCGCTGCGCTTCCCCGGGCAGCTCAACGCTGACCTGCGCAAGCTGGCGGTCAACATGGTGCCCTTCCCCCGTCTGC ACTTCTTCATGCCCGGCTTCGCCCCGCTGACGAGGCGTGGCAGCCAGCAGTACCGGGCTCTGACCGTCCCCGAGCTCAC CCAGCAGATGTTTGATGCCAAGAACATGATGGCTGCCTGCGACCCCCGCCACGGCCGCTACCTCACCGTGGCCACCGTC TTCCGCGGCCGCATGTCCATGAAGGAGGTGGACGAGCAGATGTTGGCCATCCAGAGCAAGAACAGCTCCTACTTCGTGG AGTGGATCCCCAACAATGTCAAGGTGGCTGTGTGCGACATCCCGCCCCGCGGCCTCAAGATGTCCTCCACCTTCATCGG CAACAGCACGGCCATCCAGGAGCTCTTCAAGCGCATCTCAGAGCAGTTCACCGCCATGTTCCGCCGCAAGGCCTTCCTG CATTGGTACACGGGAGAGGGGATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAACGACCTGGTGTCGGAGT ACCAGCAGTACCAGGACGCCACGGCCGAGGAGGAGGGCGAGATGTACGAGGATGATGAGGAGGAGTCGGAGCAGGGCGC CAAGTGA
Citation	Domowicz MS, Henry JG, Wadlington N, Navarro A, Kraig RP, Schwartz NB. Astrocyte precursor response to embryonic brain injury. Brain Res. 2011 May 10;1389:35-49. Epub 2011 Mar 9.
Copyright	Copyright © 2011, Elsevier
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_001031598.1).