GEISHA - A Chicken Embryo Gene Expression Database
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TWIST1
twist family bHLH transcription factor 1

Gene
Official SymbolTWIST1
Official Full Nametwist family bHLH transcription factor 1
CGNC ID49342
also known ascTwist, twist, twist-related protein 1|twist 1|twist homolog 1 (acrocephalosyndactyly 3; Saethre-Chotzen syndrome)
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_204739
PolypeptideNP_990070
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395491
Ensembl Gene
KEGGgga:395491

Entry 1

GEISHA IdTwist.Bothe.2007Data SourcePublication
Complete cDNA Template Probeshow
TTTTGCTCGGCGTTTTTTTTTTTTTCCTCCTCTTGGATCCTGATGCCATCCCCCCTCCCCCCAAAGTGAGGTCCTCCCT
CCCTCCCTCCCTCCTCCTCCTTCTCCTCGCAGGCCAGCGAAGCAGCCGCTCAAGGGGGAGCTGGTTCTCGCATCTCCCC
CCAGAGATGATGCAGCAGGACGAGTCAAACTCTCCAGTCTCCCCCGCCGACGACAGCTTGAGCAACAGCGAAGAGGAGC
CGGACCGGCAGCAGCTGCCCAGCGCCAAGAGGGGGGGCCGCAAGCGCCGCTCCAGCCGGCGCAGCGCCGGGGGCGCCGT
CGGGGCCGCGGACGAGCCCTGCAGCCCGGCTCAAGGCAAGCGGGGCAAGAAGTGCGGGGCGGGCGCGGGAGGCGGCGGC
GGCGGCGGCAGCAGCAGCGGCGGCGGCAGCCCGCAGTCCTACGAGGAGCTGCAGACCCAGCGGGTCATGGCCAACGTGC
GGGAGCGGCAGCGCACGCAGTCCCTGAACGAAGCTTTCGCCGCGCTGCGGAAGATCATCCCCACGCTGCCCTCGGACAA
GCTGAGCAAGATCCAGACCCTCAAGCTGGCGGCCAGGTACATCGACTTCCTCTACCAGGTCTTACAGAGCGACGAGCTG
GACTCCAAGATGGCAAGCTGCAGCTATGTGGCCCACGAGCGGCTCAGCTACGCCTTCTCGGTGTGGAGAATGGAGGGCG
CCTGGTCCATGTCCGCATCCCACTAGCAGGCGGCGTTCCCCCCCACGCATCCCCCCGGCAAGAGCCCTAGATAACATTT
TCCCACAGAAGGAGAAAAAAATGGACAATCTAGAGACTCTGAAGTTGGATACCGTGTTGTGTTGTTGTTGTTCTTGTCT
TAAAAAAAAAAAAAAAATGTGCCAAGGATTTCTTGGAAATTAAAAGAGCAGTTGTGTTGTTGTTGTTCTTGTCTTAAAA
AAAAAAAAAAAATGTGCCAAGGATTTCTTGGAAATTAAAAGAGCAGCATCCAAAATGAAAGCAGGGCGTGGGGAGCACT
TAAGGAAAGAGAAAGAGCCGAGGGCTTCTTGGACAGTGCCTATCCGGTGGGCGTCGGTACAATCCGCACATCTCTGCAT
TCTGATCGAAGTCTGAAACGTTCCAATGTTTTTTTTTTAAATATTTTTTATTTTAATTTTGACGAAGAATGTTGGAATC
TATTTTTTTTTCCGAATTTGCCTGTTTTTAGTTTTTTTGGTTTTTTTTTTTTTTTTGGTTGTTGCTGTCGTTTTGGCTT
TTAAATGCATGCATTCCCAAGAGGTCGTGCCTATGAGCCACTGAGGAGAGGAAGTACGTTACTGTGGACTTCATTCTTG
AATGAAAGCAAAGCACCCAACCAAAGCATCCCCTGTAGAGATGAAAACATTTTTCTTTTTTAGGGGGGATAACTGGCTC
GAG
CitationBothe I, Ahmed MU, Winterbottom FL, von Scheven G, Dietrich S. Extrinsic versus intrinsic cues in avian paraxial mesoderm patterning and differentiation. Dev Dyn. 2007 Sep;236(9):2397-409.
CopyrightCopyright © 2007 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204739).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
stage 10
Head Mesenchyme
Head Process
Sclerotome
Prechordal Plate

Entry 2

GEISHA IdTwist.Tavares.2001Data SourcePublication
Complete cDNA Template Probeshow
TTTTGCTCGGCGTTTTTTTTTTTTTCCTCCTCTTGGATCCTGATGCCATCCCCCCTCCCCCCAAAGTGAGGTCCTCCCT
CCCTCCCTCCCTCCTCCTCCTTCTCCTCGCAGGCCAGCGAAGCAGCCGCTCAAGGGGGAGCTGGTTCTCGCATCTCCCC
CCAGAGATGATGCAGCAGGACGAGTCAAACTCTCCAGTCTCCCCCGCCGACGACAGCTTGAGCAACAGCGAAGAGGAGC
CGGACCGGCAGCAGCTGCCCAGCGCCAAGAGGGGGGGCCGCAAGCGCCGCTCCAGCCGGCGCAGCGCCGGGGGCGCCGT
CGGGGCCGCGGACGAGCCCTGCAGCCCGGCTCAAGGCAAGCGGGGCAAGAAGTGCGGGGCGGGCGCGGGAGGCGGCGGC
GGCGGCGGCAGCAGCAGCGGCGGCGGCAGCCCGCAGTCCTACGAGGAGCTGCAGACCCAGCGGGTCATGGCCAACGTGC
GGGAGCGGCAGCGCACGCAGTCCCTGAACGAAGCTTTCGCCGCGCTGCGGAAGATCATCCCCACGCTGCCCTCGGACAA
GCTGAGCAAGATCCAGACCCTCAAGCTGGCGGCCAGGTACATCGACTTCCTCTACCAGGTCTTACAGAGCGACGAGCTG
GACTCCAAGATGGCAAGCTGCAGCTATGTGGCCCACGAGCGGCTCAGCTACGCCTTCTCGGTGTGGAGAATGGAGGGCG
CCTGGTCCATGTCCGCATCCCACTAGCAGGCGGCGTTCCCCCCCACGCATCCCCCCGGCAAGAGCCCTAGATAACATTT
TCCCACAGAAGGAGAAAAAAATGGACAATCTAGAGACTCTGAAGTTGGATACCGTGTTGTGTTGTTGTTGTTCTTGTCT
TAAAAAAAAAAAAAAAATGTGCCAAGGATTTCTTGGAAATTAAAAGAGCAGTTGTGTTGTTGTTGTTCTTGTCTTAAAA
AAAAAAAAAAAATGTGCCAAGGATTTCTTGGAAATTAAAAGAGCAGCATCCAAAATGAAAGCAGGGCGTGGGGAGCACT
TAAGGAAAGAGAAAGAGCCGAGGGCTTCTTGGACAGTGCCTATCCGGTGGGCGTCGGTACAATCCGCACATCTCTGCAT
TCTGATCGAAGTCTGAAACGTTCCAATGTTTTTTTTTTAAATATTTTTTATTTTAATTTTGACGAAGAATGTTGGAATC
TATTTTTTTTTCCGAATTTGCCTGTTTTTAGTTTTTTTGGTTTTTTTTTTTTTTTTGGTTGTTGCTGTCGTTTTGGCTT
TTAAATGCATGCATTCCCAAGAGGTCGTGCCTATGAGCCACTGAGGAGAGGAAGTACGTTACTGTGGACTTCATTCTTG
AATGAAAGCAAAGCACCCAACCAAAGCATCCCCTGTAGAGATGAAAACATTTTTCTTTTTTAGGGGGGATAACTGGCTC
GAG
CitationTavares AT, Izpisúja-Belmonte JC, Rodriguez-León J. Developmental expression of chick twist and its regulation during limb patterning. Int J Dev Biol. 2001 Sep
CopyrightCopyright © 2001 UBC Press
CommentsAuthors said: The riboprobe was synthesized as a digoxigenin (Boehringer) labelled probe from the whole sequence of chick cTwist (1.6kb). Sequence shown is derived from NCBI acc# NM_204739..
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
Somites
 
13-18
stage 13
stage 14
stage 15
stage 16
stage 18
Lateral Plate Mesoderm
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
 
19-24
stage 19
stage 20
stage 20
stage 22
stage 23
stage 24
Dermatome
Face Mesenchyme
Lateral Plate Mesoderm
Leg Mesenchyme
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Somites
Wing Mesenchyme
 
25-30
stage 25
stage 28
stage 30
stage 30
Leg Mesenchyme
Wing Mesenchyme
 

Entry 3

GEISHA IdTwist.Holleville.2003Data SourcePublication
Complete cDNA Template Probeshow
TTTTGCTCGGCGTTTTTTTTTTTTTCCTCCTCTTGGATCCTGATGCCATCCCCCCTCCCCCCAAAGTGAGGTCCTCCCT
CCCTCCCTCCCTCCTCCTCCTTCTCCTCGCAGGCCAGCGAAGCAGCCGCTCAAGGGGGAGCTGGTTCTCGCATCTCCCC
CCAGAGATGATGCAGCAGGACGAGTCAAACTCTCCAGTCTCCCCCGCCGACGACAGCTTGAGCAACAGCGAAGAGGAGC
CGGACCGGCAGCAGCTGCCCAGCGCCAAGAGGGGGGGCCGCAAGCGCCGCTCCAGCCGGCGCAGCGCCGGGGGCGCCGT
CGGGGCCGCGGACGAGCCCTGCAGCCCGGCTCAAGGCAAGCGGGGCAAGAAGTGCGGGGCGGGCGCGGGAGGCGGCGGC
GGCGGCGGCAGCAGCAGCGGCGGCGGCAGCCCGCAGTCCTACGAGGAGCTGCAGACCCAGCGGGTCATGGCCAACGTGC
GGGAGCGGCAGCGCACGCAGTCCCTGAACGAAGCTTTCGCCGCGCTGCGGAAGATCATCCCCACGCTGCCCTCGGACAA
GCTGAGCAAGATCCAGACCCTCAAGCTGGCGGCCAGGTACATCGACTTCCTCTACCAGGTCTTACAGAGCGACGAGCTG
GACTCCAAGATGGCAAGCTGCAGCTATGTGGCCCACGAGCGGCTCAGCTACGCCTTCTCGGTGTGGAGAATGGAGGGCG
CCTGGTCCATGTCCGCATCCCACTAGCAGGCGGCGTTCCCCCCCACGCATCCCCCCGGCAAGAGCCCTAGATAACATTT
TCCCACAGAAGGAGAAAAAAATGGACAATCTAGAGACTCTGAAGTTGGATACCGTGTTGTGTTGTTGTTGTTCTTGTCT
TAAAAAAAAAAAAAAAATGTGCCAAGGATTTCTTGGAAATTAAAAGAGCAGTTGTGTTGTTGTTGTTCTTGTCTTAAAA
AAAAAAAAAAAATGTGCCAAGGATTTCTTGGAAATTAAAAGAGCAGCATCCAAAATGAAAGCAGGGCGTGGGGAGCACT
TAAGGAAAGAGAAAGAGCCGAGGGCTTCTTGGACAGTGCCTATCCGGTGGGCGTCGGTACAATCCGCACATCTCTGCAT
TCTGATCGAAGTCTGAAACGTTCCAATGTTTTTTTTTTAAATATTTTTTATTTTAATTTTGACGAAGAATGTTGGAATC
TATTTTTTTTTCCGAATTTGCCTGTTTTTAGTTTTTTTGGTTTTTTTTTTTTTTTTGGTTGTTGCTGTCGTTTTGGCTT
TTAAATGCATGCATTCCCAAGAGGTCGTGCCTATGAGCCACTGAGGAGAGGAAGTACGTTACTGTGGACTTCATTCTTG
AATGAAAGCAAAGCACCCAACCAAAGCATCCCCTGTAGAGATGAAAACATTTTTCTTTTTTAGGGGGGATAACTGGCTC
GAG
CitationHolleville N, Quilhac A, Bontoux M, Monsoro-Burq AH. BMP signals regulate Dlx5 during early avian skull development. Dev Biol. 2003 May 1;257(1):177-89.
CopyrightCopyright © 2003 Elsevier Science (USA) All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204739).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-38
stage 38
stage 38
Head Mesenchyme
 

Entry 4

GEISHA IdTWIST.Bothe.2011Data SourcePublication
Complete cDNA Template Probeshow
TTTTGCTCGGCGTTTTTTTTTTTTTCCTCCTCTTGGATCCTGATGCCATCCCCCCTCCCCCCAAAGTGAGGTCCTCCCT
CCCTCCCTCCCTCCTCCTCCTTCTCCTCGCAGGCCAGCGAAGCAGCCGCTCAAGGGGGAGCTGGTTCTCGCATCTCCCC
CCAGAGATGATGCAGCAGGACGAGTCAAACTCTCCAGTCTCCCCCGCCGACGACAGCTTGAGCAACAGCGAAGAGGAGC
CGGACCGGCAGCAGCTGCCCAGCGCCAAGAGGGGGGGCCGCAAGCGCCGCTCCAGCCGGCGCAGCGCCGGGGGCGCCGT
CGGGGCCGCGGACGAGCCCTGCAGCCCGGCTCAAGGCAAGCGGGGCAAGAAGTGCGGGGCGGGCGCGGGAGGCGGCGGC
GGCGGCGGCAGCAGCAGCGGCGGCGGCAGCCCGCAGTCCTACGAGGAGCTGCAGACCCAGCGGGTCATGGCCAACGTGC
GGGAGCGGCAGCGCACGCAGTCCCTGAACGAAGCTTTCGCCGCGCTGCGGAAGATCATCCCCACGCTGCCCTCGGACAA
GCTGAGCAAGATCCAGACCCTCAAGCTGGCGGCCAGGTACATCGACTTCCTCTACCAGGTCTTACAGAGCGACGAGCTG
GACTCCAAGATGGCAAGCTGCAGCTATGTGGCCCACGAGCGGCTCAGCTACGCCTTCTCGGTGTGGAGAATGGAGGGCG
CCTGGTCCATGTCCGCATCCCACTAGCAGGCGGCGTTCCCCCCCACGCATCCCCCCGGCAAGAGCCCTAGATAACATTT
TCCCACAGAAGGAGAAAAAAATGGACAATCTAGAGACTCTGAAGTTGGATACCGTGTTGTGTTGTTGTTGTTCTTGTCT
TAAAAAAAAAAAAAAAATGTGCCAAGGATTTCTTGGAAATTAAAAGAGCAGCATCCAAAATGAAAGCAGGGCGTGGGGA
GCACTTAAGGAAAGAGAAAGAGCCGAGGGCTTCTTGGACAGTGCCTATCCGGTGGGCGTCGGTACAATCCGCACATCTC
TGCATTCTGATCGAAGTCTGAAACGTTCCAATGTTTTTTTTTTAAATATTTTTTATTTTAATTTTGACGAAGAATGTTG
GAATCTATTTTTTTTTCCGAATTTGCCTGTTTTTAGTTTTTTTGGTTTTTTTTTTTTTTTTGGTTGTTGCTGTCGTTTT
GGCTTTTAAATGCATGCATTCCCAAGAGGTCGTGCCTATGAGCCACTGAGGAGAGGAAGTACGTTACTGTGGACTTCAT
TCTTGAATGAAAGCAAAGCACCCAACCAAAGCAATCCCTGTAGAGATGAAAACATTTTTCTTTTTTAGGGGGGAATAAG
CTGGGCTCGAGCTGTTATATACCCGGTTCCTAACTTTTTTTTTTATTATTATTATTATTTTTCCTCTGAGAAAAAAAAA
AATAAACATTTTATTTATTTATTGATGACCCATGTTAAAATGCAAATAGATCCGGTGTCTAAATGCATTCCTATTTTTA
TGATTGTTTTGTAAATATCATTGTATATTATTTTTCTGCAATAAAGAAATATGATTGAAATTTT
CitationBothe I, Tenin G, Oseni A, Dietrich S., Dynamic control of head mesoderm patterning., Development. 2011 Jul;138(13):2807-21.
CopyrightPermission from the authors and the Company of Biologists Ltd. Copyright held by the authors.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # BK006263).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 1
stage 1
  
4-6
stage 6
Head Mesenchyme
Head Process
prechordal mesendoderm pchme
7-12
stage 7
stage 8
stage 9
stage 10
stage 10
Head Mesenchyme
Head Process
Lateral Plate Mesoderm
Somites
prechordal mesendoderm pchme
13-16
stage 13
stage 16
Head Mesenchyme
Pharyngeal Arches and Clefts
Somites
 

Entry 5

GEISHA IdTWIST1.Firulli.2005Data SourcePublication
Complete cDNA Template Probeshow
TTTTGCTCGGCGTTTTTTTTTTTTTCCTCCTCTTGGATCCTGATGCCATCCCCCCTCCCCCCAAAGTGAGGTCCTCCCT
CCCTCCCTCCCTCCTCCTCCTTCTCCTCGCAGGCCAGCGAAGCAGCCGCTCAAGGGGGAGCTGGTTCTCGCATCTCCCC
CCAGAGATGATGCAGCAGGACGAGTCAAACTCTCCAGTCTCCCCCGCCGACGACAGCTTGAGCAACAGCGAAGAGGAGC
CGGACCGGCAGCAGCTGCCCAGCGCCAAGAGGGGGGGCCGCAAGCGCCGCTCCAGCCGGCGCAGCGCCGGGGGCGCCGT
CGGGGCCGCGGACGAGCCCTGCAGCCCGGCTCAAGGCAAGCGGGGCAAGAAGTGCGGGGCGGGCGCGGGAGGCGGCGGC
GGCGGCGGCAGCAGCAGCGGCGGCGGCAGCCCGCAGTCCTACGAGGAGCTGCAGACCCAGCGGGTCATGGCCAACGTGC
GGGAGCGGCAGCGCACGCAGTCCCTGAACGAAGCTTTCGCCGCGCTGCGGAAGATCATCCCCACGCTGCCCTCGGACAA
GCTGAGCAAGATCCAGACCCTCAAGCTGGCGGCCAGGTACATCGACTTCCTCTACCAGGTCTTACAGAGCGACGAGCTG
GACTCCAAGATGGCAAGCTGCAGCTATGTGGCCCACGAGCGGCTCAGCTACGCCTTCTCGGTGTGGAGAATGGAGGGCG
CCTGGTCCATGTCCGCATCCCACTAGCAGGCGGCGTTCCCCCCCACGCATCCCCCCGGCAAGAGCCCTAGATAACATTT
TCCCACAGAAGGAGAAAAAAATGGACAATCTAGAGACTCTGAAGTTGGATACCGTGTTGTGTTGTTGTTGTTCTTGTCT
TAAAAAAAAAAAAAAAATGTGCCAAGGATTTCTTGGAAATTAAAAGAGCAGTTGTGTTGTTGTTGTTCTTGTCTTAAAA
AAAAAAAAAAAATGTGCCAAGGATTTCTTGGAAATTAAAAGAGCAGCATCCAAAATGAAAGCAGGGCGTGGGGAGCACT
TAAGGAAAGAGAAAGAGCCGAGGGCTTCTTGGACAGTGCCTATCCGGTGGGCGTCGGTACAATCCGCACATCTCTGCAT
TCTGATCGAAGTCTGAAACGTTCCAATGTTTTTTTTTTAAATATTTTTTATTTTAATTTTGACGAAGAATGTTGGAATC
TATTTTTTTTTCCGAATTTGCCTGTTTTTAGTTTTTTTGGTTTTTTTTTTTTTTTTGGTTGTTGCTGTCGTTTTGGCTT
TTAAATGCATGCATTCCCAAGAGGTCGTGCCTATGAGCCACTGAGGAGAGGAAGTACGTTACTGTGGACTTCATTCTTG
AATGAAAGCAAAGCACCCAACCAAAGCATCCCCTGTAGAGATGAAAACATTTTTCTTTTTTAGGGGGGATAACTGGCTC
GAG
CitationBeth A. Firulli, Dayana Krawchuk, Victoria E. Centonze, David M. Virshup, Simon J. Conway, Peter Cserjesi, Ed Laufer, Anthony B. Firulli. Altered Twist1 and Hand2 dimerization is associated with Saethre-Chotzen syndrome and limb abnormalities. Nat Genet. 2005 April; 37(4): 373–381.
Copyright© 2012 Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204739.1 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 20
stage 21
stage 24
stage 24
Limb Buds
 
25-30
stage 27
stage 30
stage 30
Limb Buds
 

Entry 6

GEISHA IdTWIST-1.Dady.2012Data SourcePublication
Complete cDNA Template Probeshow
GCCCGCAGTCCTACGAGGAGCTGCAGACCCAGCGGGTCATGGCCAACGTGCGGGAGCGGCAGCGCACGCAGTCCCTGAA
CGAAGCTTTCGCCGCGCTGCGGAAGATCATCCCCACGCTGCCCTCGGACAAGCTGAGCAAGATCCAGACCCTCAAGCTG
GCGGCCAGGTACATCGACTTCCTCTACCAGGTCTTACAGAGCGACGAGCTGGACTCCAAGATGGCAAGCTGCAGCTATG
TGGCCCACGAGCGGCTCAGCTACGCCTTCTCGGTGTGGAGAATGGAGGGCGCCTGGTCCATGTCCGCATCCCACTAGCA
GGCGGCGTTCCCCCCCACGCATCCCCCCGGCAAGAGCCCTAGATAACATTTTCCCACAGAAGGAGAAAAAAATGGACAA
TCTAGAGACTCTGAAGTTGGATACCGTGTTGTGCTGTGCTGTCTTGTCTTAAAAAAAAAAAAAAATTGTGCCAGGGATT
TCTGGGAATTTAAAAGAGCAGCTTCCAAATTGAAAGCAGGGCGTGGGGAGCACTTAGGGAAAGAGAAAGAGCCGAGGGC
TCCTGGGACAGTGCCTATCCGGGGGGCGTCGGTACAATCCGCACATCTCTGCATTCTGATCGAAGTCTGAAACGTTCCC
AGTGTTTTTTTTTCACATATTTCTATATTACAATTTGGACCGACAGATTGTTGCGACATCTAATAATTCCGCGAATTGG
CCTTAACAA
CitationDady A, Blavet C, Duband JL Timing and kinetics of E- to N-cadherin switch during neurulation in the avian embryo DEVELOPMENTAL DYNAMICS. Volume 241, Issue 8, August 2012, Pages: 1333–1349.
CopyrightCopyright © 2012 Wiley-Liss, Inc.
CommentsThe complete cDNA template sequence was obtained from the information provided in the publication as described in Dady et al. 2012.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-8
stage 8
  

Mouse

Emage
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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