GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

HNF1B
HNF1 homeobox B

Gene
Official SymbolHNF1B
Official Full NameHNF1 homeobox B
CGNC ID4099
also known ashepatocyte nuclear factor 1-beta
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_003642414
PolypeptideXP_003642462
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene427838
Ensembl Gene
KEGGgga:427838

Entry 1

GEISHA IdVHNF1.Aragon.2009Data SourcePublication
Complete cDNA Template Probeshow
CCCACCAACAAGAAGATGCGTCGCAACCGGTTCAAGTGGGGGCCCGCGTCCCAGCAAATCTTGTACCAGGCCTACGACC
GGCAAAAGAACCCCAGCAAGGAAGAGAGGGAGGCCTTAGTGGAGGAGTGCAACAGGGCAGAATGTTTGCAGCGAGGCGT
CTCCCCCTCCAAAGCCCACGGCCTGGGCTCCAACCTGGTCACTGAGGTCCGCGTCTACAACTGGTTCGCAAACCGCAGG
AAGGAGGAGGCGTTCCGGCAGAAGCTGGCCATGGACGCCTACAGCTCCAGCCAGACGCACGGCCTGAACACCCTGCTCT
CCCACGGATCCCCCCACCACCAACCCAGCACCTCCCCTCCAAACAAGCTGCCAGGAGTGCGCTACAGCCAGCAGGGAAG
CAATGAGGTCACTTCCTCCTCAACAATCAGTCACCATGGCAACAGCGCCATGGTGACTAGCCAGTCGGTTTTACAGCAA
GTCTCTCCAGCCAGCCTGGACCCGGGCCACAATCTCCTCTCACCTGATGGTAAAATGATCTCAGTCTCGGGAGGAGGTT
TGCCCCCTGTCAGCACCTTGACGAATATCCACAGCCTGTCCCACCACAATCCCCAGCAATCTCAAAACCTCATCATGAC
CCCCCTCTCTGGAGTCATGGCCATCGCACAAAG
CitationFerran Aragon, Cristina Pujades. FGF signaling controls caudal hindbrain specification through Ras-ERK1/2 pathway. BMC Dev Biol. 2009; 9: 61.
CopyrightCopyright ©2009 Aragon and Pujades; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 8
stage 10
stage 10
Anterior Intestinal Portal
Hindbrain
 

Entry 2

GEISHA IdHNF1B.Trevers.2023Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GCGGGGAGACCCGGGACCATGGTGTCCCAGCTGAGCGCCCTGCAGCGGGAGCTCCTGGGCGCCCTGCTCAGCTCCGGGG
CCACCAAGGAGGGGCTGATCCGCGCCCTGGAGGACATGGTGCCCGCCGCAGGCTTCGGCGTCAAGCTGGAGAGCCTGCC
GCTGTCCCCCGGCGGGCCGCCCGACGGCAAGCCCGGCTTCGTGCCGCTGGCCAACGGGCACGGCAAGGGCAAGCTGTCC
GGCGACGAGGGCTCGGAGGACGGCGACGACTTCGACACGCCGCAGATTCTCCGCGAGCTGCAGGCGCTCAACACTGAGG
AGGCCGTGGAGCAGCGGGCAGAAGTGGACAGGATGATCAGCGAGGACCCATGGCGGGCGGCGAAGATGATCAAGGGCTA
CATGCAGCAGCACAACATCCCGCAGCGCGAGGTGGTGGACGTCACCGGCCTCAACCAGTCGCACCTCTCGCAGCACCTC
AACAAAGGCACCCCCATGAAGACACAGAAGCGGGCCGCCCTCTACACGTGGTACGTCCGCAAGCAGCGGGAGATCCTGC
GGCAGTTCAATCAGCAGAACCAGGGGGCTGGCCAGCTCGACGATGCCTGCGCCGAAACCCCCAGCAAGAAGATGCGCCG
CAACCGCTTCAAGTGGGGGCCGGCCTCCCAGCAAATCTTGTACCAAGCCTACGACCGCCAAAAGAACCCCAGCAAGGAG
GAGCGGGAGGCGCTGGTGGAGGAGTGCAACAGGGCCGAGTGTCTGCAGCGAGGGGTGTCACCCTCCAAGGCGCATGGTC
TTGGCTCCAACCTGGTGACGGAGGTGCGTGTCTACAACTGGTTCGCCAACCGGCGGAAGGAGGAAGCTTTCCGCCAGAA
GTTGGCCATGGACGCCTACAGCTCAGGCCAGCCCACGCACAGCATGAACCTGCTGCTGTCCCACGGCTCCCCGCACCAC
AACCAGCCCAGCGCCTCACCGCCCAGCAAGATGCCAGGGGTCCGGTACGGCCAGGGGGCGAGCAGCGAGGCGGCATCCT
CCGGGGCCATCAGCCACCACGGCAGCGGTGCCATGGTCACCACCAGCCAGGCGGTCCTGCAGCAGGTCTCCCCAGCCGG
CTTGGACCCGGGCCACGGTTTGCTCTCTCCCGACGGTAAAATGATCTCTGTGTCGGGTGGTGGGCTGCCGCCAGTGAGC
ACCCTGACCAACATCCACAGCCTGTCCCACCACAACCCGCAGCAGTCCCAGAACCTCATCATGACGCCGCTCTCAGGAG
TCATGGCCATTGCACAGAGTCTGAACACCTCGCAGGCACAGAGCGTCCCTGTCATCAACAGCGTGGCTGGCAGCTTGGC
AGCCCTGCAGCCGGTGCAGTTCTCGCAGCAGCTGCACAGCCCACACCAGCAGCCACTCATGCAGCAGTCGCCCAGCCAC
ATGGCCCAGCAGCCCTTCATGGCCACCGTCACCCAGCTGCAGAACTCGCACATGTATGCACACAAGCAGGAGCCCCCCC
AGTATTCCCACACCTCCCGCTTCCCCTCGGCAATGGTGGTGACAGACACCAGCAGCATCAGCACACTCACCAACATGTC
TTCCAGCAAGCAGTGTCCCCTGCAAGCCTGGTGATGCTCCACACCTCGCTGCCTTTGCACATAGCAACGGGAACTTATT
TTCCACAACATCCCGCTGGTGACCTGCGCGTCGAGCTGGAGCGAAGCTCAGTGTTGCAGTGAGGAGCCCATTACCCTGA
CATGCGGCCGGAGCCTCGCAACCCCACGCCAGGGACCAGCCCGAAACCGAACCCGCACCGTGGGACCGCGCCTCTCCTC
CCCTCCATGCAGTATTTCCGAGCCGTGTCCTGAGGACTGTTTTTTTCCGAAGTATTTGCCTTCCAAGAGGCCTTTGGCT
CTCCCGAGGAAATAGGAACAAGCTATACTGGGACGTGGCAGAAGATGGATCGTATTTAAGTTATACTCCTCCACCTGAT
GGACTGAGAGGGACCCGGGTCTGTTACTTGGCTTTTGGAAGGAGGAATCTCGTGCTGTTGAACTGAGCCAGTCGAACTG
TAAATATAGGTACAGTCTGCTCCACCCTCACCCATCCCTGCTCCTATACATAGAGATTTATATAAAAGAAGTAAATTTT
GCCCAATTGATGTAAACTATTGTAATTAAGTGCAATTCCCCCATCTGTATATATTGTTCCTGCATTTCTTCTCTCCCTC
AGTCCTATTTTTTATTTTTTGGTAAAGGTCAGAGCTCTGCATGGTTTTGGTTTTGTATTTTCTTTCTTCTCTTAATGGA
GTTAATTAACGAAGAAAGCCCTGTGTCTACGCAGAGACACCAGCATCACTCCCTGCCCCGCAGAGGGTCAGGCACCGAG
CTGAGCCCCAGCAGCTGGCCCCAGGACTGGGTGACATGAGGAGCTCAGGGACAATCCTGTGTCTGGGGACGCAGAATAG
GGCTGCCATGGGTTGATCCACTCTGCAGCCAATGCATGTCCCAGCCTGGCACCCACTGGGGACACTGTGCTGTGCACTG
TCAGAGCCTTGCCCTGCTGCATCTACCTGAATCTGACTTCCCAAAGCTGTGAAAGGGACCATCTCACCTGCCATGGGAC
ATGAGCTCCTCCATACCCACATCCCTTTGGAAATGGATCTAATGCTCCTCGGTTGTTTAAATTTTTCTTAAACTTTGTC
ATGTGTGCCAAATGCTGAGAGTGCTTTAAAGAGGCGAAGAGCAGCGGAGGTGCATGTGGACAGTCAGCCACTGCTCAGA
AGAACACTGGATGCTTTTTCTGGGGCAAGAAATGCTATTTTATGGTGTATTTGTACAATAACCATTGCCAGGACTGATA
GGAGCAATCCTATGGGGAATAAGTCATCATGAATCAGAGACTGATATTCAAATTACATTTAATTTAATGTATACCATAA
TTAAAAACCATTTTTTCAGA
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_003642414).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XIII
Area Pellucida
Kohler's Sickle
 
1-3
stage 3
Lateral Plate Mesoderm
 
4-6
stage 4
Area Opaca
Extraembryonic Mesoderm
extraembryonic mesoderm
 
7
stage 7
Blood Islands
Head Mesenchyme
Neural Plate/Tube
Primitive Streak
Somites
extraembryonic mesoderm
 
all
 
  

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona