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VSNL1
visinin like 1

Gene
Official SymbolVSNL1
Official Full Namevisinin like 1
CGNC ID12327
also known asvisinin-like protein 1|OZ1|VILIP, Visinin-like protein 1 (VILIP), OZ1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205255
PolypeptideNP_990586
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.10425
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human7447ENSG00000163032MIM:600817
Mouse26950ENSMUSG00000054459All phenotypic alleles (3):Targeted, knock-out(2) Targeted, other(1) MGI:1349453
Xenopus779779, 495340, 495147952044
Zebrafish492494, 561162ENSDARG00000023228, ENSDARG00000044053ZDB-GENE-041001-211, ZDB-GENE-080225-39ZFIN:ZDB-GENE-041001-211, ZFIN:ZDB-GENE-080225-39
Gene Ontology
Molecular Functioncalcium ion binding
Biological Process
Cellular Component
Links to other databases
Entrez Gene396189
Ensembl Gene
KEGGgga:396189

Entry 1

GEISHA IdVisinin.Bradford.2005Data SourcePublication
Complete cDNA Template Probeshow
GCGCCGTCCCTCCGGCCCCAGCACCCCGGCGGGACCCCGGGCCCCAGCGCCCTCCTCCGCACCGCCGACCGCTCCCAGC
GCCGTCTGCAGAATGGGGAAACAGAATAGCAAGCTGGCCCCTGAGGTGATGGAAGATCTGGTGAAGAGCACGGAGTTCA
ACGAACACGAGCTAAAACAGTGGTACAAAGGATTTCTAAAGGACTGTCCAAGTGGTAGGCTGAACCTTGAGGAGTTTCA
GCAGCTTTACGTAAAGTTCTTTCCATATGGAGATGCTTCCAAGTTTGCCCAGCACGCCTTCCGAACCTTTGATAAAAAT
GGAGATGGGACCATTGACTTCAGAGAGTTCATCTGTGCACTGTCCATCACCTCCAGAGGCAGTTTTGAGCAGAAGCTAA
ACTGGGCCTTCAACATGTACGACCTGGATGGTGATGGGAAGATTACAAGGGTGGAAATGCTGGAAATCATAGAGGCCAT
CTACAAAATGGTGGGCACTGTGATAATGATGAAGATGAATGAGGATGGCCTGACGCCTGAGCAGCGGGTAGACAAGATC
TTCAGTAAGATGGATAAGAACAAAGATGACCAGATCACACTGGATGAATTCAAAGAAGCTGCAAAGAGTGATCCTTCCA
TTGTATTACTCCTGCAGTGTGACATTCAAAAATGAGCTTGTGTATAATGCATCATAGACTGCACAGAAGTTTAATGTTC
CATTCAGTTTGCAGCTATTTCCACACACACAGAAATTTGCTTGGACTACCTATAAATGGACTTGCTTCTTGTGTTTGAA
ACACTTGTGTGCATGAGAATGTCATTTGCTTAAAGAATTTTTAAAAGTATATATTATAAAAATAAACTGCCACAACGTG
ATGTGTGCAATGTCATTTCATACCAACCCTATTCCTCTGAAGCCTGTGCAGCAGTCCTGTGCTGCAGTGAATTATATTA
TTTATTGTTCATGTTTTACTGATGCTAGCTCTGTGTCTCCTAGACTGAGTAATGTTAGTGACACTGAATTCCCACGGTA
ATGTTAATTGTTTATTATAAACCATGCCACCATTCTGCTGTAAAGTAGTATTGGACAGACAGAGGGAAGAGTTCCTCAG
TTCTTGAGTCTGATCCACACATGTGCTCGTATTGTCAGTGGATATAAATGTACTTCATTTGCATGCCTTTTAGGTTTGC
CTTAATTCTTACCTCATTTGCATCCCTTCAATCTGGAAAGAGCTGTGTCAGAGGAATGCAGTATAAAAAAGCAAAATCC
TGCTAAAAACGTTCCCCCTTAAAAGTATATATAAATATATATATATAATGTTTAAAATATTGTTTTATTGGAGTTTAAA
GGTTTTATTGGAAGTGTATTGATCTTTGCCTGAATTTTCAAAAGCTTCCACAGAGGTTGCAATATATATGTCCCAAATA
AATTTATAACATTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
CitationBradford RL, Wang C, Zack DJ, Adler R. Roles of cell-intrinsic and microenvironmental factors in photoreceptor cell differentiation. Dev Biol. 2005 Oct 1;286(1):31-45.
CopyrightCopyright © 2005 Elsevier Inc. All rights reserved.
CommentsAccording to the authors, "cDNA was synthesized with Superscript II using both oligo(dT) and random primers, and purified by phenol–chloroform extraction and ethanol precipitation." As information provided was insufficient to verify exact sequence used to synthesize probe,the sequence below was obtained from NCBI (NM_205255).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 23
Retina
Photoreceptor layer
31-44
stage 34
stage 38
stage 44
stage 44
Retina
Outer nuclear layer

Entry 2

GEISHA IdVISININ.Shin.2009Data SourcePublication
Complete cDNA Template Probeshow
GCGCCGTCCCTCCGGCCCCAGCACCCCGGCGGGACCCCGGGCCCCAGCGCCCTCCTCCGCACCGCCGACCGCTCCCAGC
GCCGTCTGCAGAATGGGGAAACAGAATAGCAAGCTGGCCCCTGAGGTGATGGAAGATCTGGTGAAGAGCACGGAGTTCA
ACGAACACGAGCTAAAACAGTGGTACAAAGGATTTCTAAAGGACTGTCCAAGTGGTAGGCTGAACCTTGAGGAGTTTCA
GCAGCTTTACGTAAAGTTCTTTCCATATGGAGATGCTTCCAAGTTTGCCCAGCACGCCTTCCGAACCTTTGATAAAAAT
GGAGATGGGACCATTGACTTCAGAGAGTTCATCTGTGCACTGTCCATCACCTCCAGAGGCAGTTTTGAGCAGAAGCTAA
ACTGGGCCTTCAACATGTACGACCTGGATGGTGATGGGAAGATTACAAGGGTGGAAATGCTGGAAATCATAGAGGCCAT
CTACAAAATGGTGGGCACTGTGATAATGATGAAGATGAATGAGGATGGCCTGACGCCTGAGCAGCGGGTAGACAAGATC
TTCAGTAAGATGGATAAGAACAAAGATGACCAGATCACACTGGATGAATTCAAAGAAGCTGCAAAGAGTGATCCTTCCA
TTGTATTACTCCTGCAGTGTGACATTCAAAAATGAGCTTGTGTATAATGCATCATAGACTGCACAGAAGTTTAATGTTC
CATTCAGTTTGCAGCTATTTCCACACACACAGAAATTTGCTTGGACTACCTATAAATGGACTTGCTTCTTGTGTTTGAA
ACACTTGTGTGCATGAGAATGTCATTTGCTTAAAGAATTTTTAAAAGTATATATTATAAAAATAAACTGCCACAACGTG
ATGTGTGCAATGTCATTTCATACCAACCCTATTCCTCTGAAGCCTGTGCAGCAGTCCTGTGCTGCAGTGAATTATATTA
TTTATTGTTCATGTTTTACTGATGCTAGCTCTGTGTCTCCTAGACTGAGTAATGTTAGTGACACTGAATTCCCACGGTA
ATGTTAATTGTTTATTATAAACCATGCCACCATTCTGCTGTAAAGTAGTATTGGACAGACAGAGGGAAGAGTTCCTCAG
TTCTTGAGTCTGATCCACACATGTGCTCGTATTGTCAGTGGATATAAATGTACTTCATTTGCATGCCTTTTAGGTTTGC
CTTAATTCTTACCTCATTTGCATCCCTTCAATCTGGAAAGAGCTGTGTCAGAGGAATGCAGTATAAAAAAGCAAAATCC
TGCTAAAAACGTTCCCCCTTAAAAGTATATATAAATATATATATATAATGTTTAAAATATTGTTTTATTGGAGTTTAAA
GGTTTTATTGGAAGTGTATTGATCTTTGCCTGAATTTTCAAAAGCTTCCACAGAGGTTGCAATATATATGTCCCAAATA
AATTTATAACATTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
CitationShin SK, O'Brien KM. Progenitor cells of the rod-free area centralis originate in the anterior dorsal optic vesicle. BMC Dev Biol. 2009 Nov 25;9:57.
Copyright© 1999-2011 BioMed Central Ltd
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_205255.1 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31
stage 31
stage 31
stage 31
stage 31
stage 31
stage 31
Retina
Reference figure for all other images from this paper.

Entry 3

GEISHA IdVISININ.Yan.2005Data SourcePublication
Complete cDNA Template Probeshow
GCGCCGTCCCTCCGGCCCCAGCACCCCGGCGGGACCCCGGGCCCCAGCGCCCTCCTCCGCACCGCCGACCGCTCCCAGC
GCCGTCTGCAGAATGGGGAAACAGAATAGCAAGCTGGCCCCTGAGGTGATGGAAGATCTGGTGAAGAGCACGGAGTTCA
ACGAACACGAGCTAAAACAGTGGTACAAAGGATTTCTAAAGGACTGTCCAAGTGGTAGGCTGAACCTTGAGGAGTTTCA
GCAGCTTTACGTAAAGTTCTTTCCATATGGAGATGCTTCCAAGTTTGCCCAGCACGCCTTCCGAACCTTTGATAAAAAT
GGAGATGGGACCATTGACTTCAGAGAGTTCATCTGTGCACTGTCCATCACCTCCAGAGGCAGTTTTGAGCAGAAGCTAA
ACTGGGCCTTCAACATGTACGACCTGGATGGTGATGGGAAGATTACAAGGGTGGAAATGCTGGAAATCATAGAGGCCAT
CTACAAAATGGTGGGCACTGTGATAATGATGAAGATGAATGAGGATGGCCTGACGCCTGAGCAGCGGGTAGACAAGATC
TTCAGTAAGATGGATAAGAACAAAGATGACCAGATCACACTGGATGAATTCAAAGAAGCTGCAAAGAGTGATCCTTCCA
TTGTATTACTCCTGCAGTGTGACATTCAAAAATGAGCTTGTGTATAATGCATCATAGACTGCACAGAAGTTTAATGTTC
CATTCAGTTTGCAGCTATTTCCACACACACAGAAATTTGCTTGGACTACCTATAAATGGACTTGCTTCTTGTGTTTGAA
ACACTTGTGTGCATGAGAATGTCATTTGCTTAAAGAATTTTTAAAAGTATATATTATAAAAATAAACTGCCACAACGTG
ATGTGTGCAATGTCATTTCATACCAACCCTATTCCTCTGAAGCCTGTGCAGCAGTCCTGTGCTGCAGTGAATTATATTA
TTTATTGTTCATGTTTTACTGATGCTAGCTCTGTGTCTCCTAGACTGAGTAATGTTAGTGACACTGAATTCCCACGGTA
ATGTTAATTGTTTATTATAAACCATGCCACCATTCTGCTGTAAAGTAGTATTGGACAGACAGAGGGAAGAGTTCCTCAG
TTCTTGAGTCTGATCCACACATGTGCTCGTATTGTCAGTGGATATAAATGTACTTCATTTGCATGCCTTTTAGGTTTGC
CTTAATTCTTACCTCATTTGCATCCCTTCAATCTGGAAAGAGCTGTGTCAGAGGAATGCAGTATAAAAAAGCAAAATCC
TGCTAAAAACGTTCCCCCTTAAAAGTATATATAAATATATATATATAATGTTTAAAATATTGTTTTATTGGAGTTTAAA
GGTTTTATTGGAAGTGTATTGATCTTTGCCTGAATTTTCAAAAGCTTCCACAGAGGTTGCAATATATATGTCCCAAATA
AATTTATAACATTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
CitationYan RT, Ma W, Liang L, Wang SZ.. bHLH Genes and Retinal Cell Fate Specification. Mol Neurobiol. 2005 October; 32(2): 157–171.
Copyright© Springer, Part of Springer Science+Business Media
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-29
stage 29
stage 29
Retina
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.10425

Mouse

Emage
EurexpressMGI:1349453
MGI GXDMGI:1349453

Frog

Xenbase952044

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-041001-211, ZDB-GENE-080225-39
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