GEISHA - A Chicken Embryo Gene Expression Database
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SOSTDC1
sclerostin domain containing 1

Gene
Official SymbolSOSTDC1
Official Full Namesclerostin domain containing 1
CGNC ID8208
also known asWISE, sclerostin domain-containing protein 1|context-dependent activator and inhibitor of Wnt signalling protein Wise|wnt-signaling modulator
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204373
PolypeptideNP_989704
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.9261
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human25928ENSG00000171243MIM:609675
Mouse66042ENSMUSG00000036169All phenotypic alleles (8):Spontaneous(1) Targeted, knock-out(3) Targeted, other(4) MGI:1913292
Xenopus100101775, 386733, 398708478255
Zebrafish100332581, 550261, 564783ENSDARG00000068892, ENSDARG00000056021ZDB-GENE-050417-64, ZDB-GENE-060503-653ZFIN:ZDB-GENE-050417-64, ZFIN:ZDB-GENE-060503-653
Gene Ontology
Molecular Function
Biological ProcessWnt signaling pathway
Cellular Componentextracellular space
Links to other databases
Entrez Gene378800
Ensembl Gene
KEGGgga:378800

Entry 1

GEISHA IdWISE.Shigetani.2007Data SourcePublication
Complete cDNA Template Probeshow
CACAACTTTACACCTGAATGAATGCCAAGCCTCTCCGAATATAAAAAGGAAACCTTGAAGAGCAATTTCAGAGTTAGCG
AGAACGAGCAGAAGAAAAACATTTCATCCGGCTCCGTCAGACAGAGACCAAACCAATCATGCTTCTCTCCGCCATTCAC
TTCTACGGCTTACTCCTAGCTTGCACCTTCACGAGAAGCTACTCGGCTTTCAAGAACGATGCCACTGAGATACTTTATT
CCCACGTCGTTAAACCTGCCCCTGCGAGCCCGAGCAGCAACAGCACGTTGAACCAAGCCAGGAACGGAGGGAGGCACTA
CGCCGGCACGGGCTCCGACCGTAACAATCGCGTTCAAGTTGGCTGCCGGGAACTGCGATCTACCAAGTACATCTCAGAC
GGCCAGTGCACCAGCATCAATCCCCTGAAGGAGCTGGTGTGTGCTGGCGAATGCCTCCCCTTGCCGCTCCTGCCCAACT
GGATTGGAGGAGGTTATGGAACCAAGTACTGGAGCAGACGGAGCTCGCAAGAGTGGAGATGTGTCAATGACAAAACTCG
CACCCAGAGGATCCAGCTGCAGTGCCAGGATGGAAGTATAAGAACCTACAAAATAACTGTGGTCACGGCCTGCAAGTGC
AAGCGATACACCAGGCAGCACAACGAGTCCAGCCACAACTTTGAGGGAACCTCTCAAGCAAAGCCTGTCCAGCATCACA
AAGAGAGAAAAAGAGCCAGTAAATCCAGCAAACATAGTACAAGTTAGAAGTCAGACGTCCTCTCCTCTCCTGCTCCTCC
TGCCAAAACTGAACTCACCTGTAACCATTTGCTTTACAGTTCTGACTGCTTAAAGACAAGTCTGCCATTGCTTTGTTCT
CAGATGATACTGCACGCTTATTGTTTTGACCAAAATCAAAAGGGGCATTCTCAGCATATGGACCTTTTTGGGTGACTGT
CCAAAAGCTCAAGATGGGCAGTAACACAAGCCTTCTAAACCCTCACTTCAAAGTTTTACATTCCCTCCAGCCACGGAGG
CAAAGAAAAGTTGCCATGAATATTCACGGAAGTCTGTTTTGTAAAATGGTGCTTTGTTGTGTGTCTTCACGAGAACAGT
TTATTATCACTCCTATCGCCTTCTCTATCGATGTTTTATGAACTTCTGACAACAGCTTACAAATGCAACACCAACTATC
TGCTTTCAGATTCATTCTAAGAAAAGAATGCCTTGCATGCTGATCTTTCCCCTCAGTATACCAAAAATGAAAATATGCA
TGGCAGCAATCCAAAAGTAACGCGGAACAAACTATTTATTTGTTGTTGTAATTATTTAATGAGCTTTTGTATTATTTTT
GTTTAAAAGTGTGCAATCAAAAGACAGATATGACTTCCTTTCCAATTCATTGGTTTCTTTTTTTTTTTGTACAAAAATA
AACACTGCTAA
CitationShigetani Y, Itasaki N. Expression of Wise in chick embryos. Dev Dyn. 2007 Aug;236(8):2277-84.
Copyright© British Crown copyright 2007/DERA–published with permission of the Controller of Her Majesty's Stationery Office.
CommentsInsufficient information in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI acc #NM_204373.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-9
stage 9
Surface Ectoderm
 

Entry 2

GEISHA IdSOSTDC1.Mou.2011Data SourcePublication
Complete cDNA Template Probeshow
CACAACTTTACACCTGAATGAATGCCAAGCCTCTCCGAATATAAAAAGGAAACCTTGAAGAGCAATTTCAGAGTTAGCG
AGAACGAGCAGAAGAAAAACATTTCATCCGGCTCCGTCAGACAGAGACCAAACCAATCATGCTTCTCTCCGCCATTCAC
TTCTACGGCTTACTCCTAGCTTGCACCTTCACGAGAAGCTACTCGGCTTTCAAGAACGATGCCACTGAGATACTTTATT
CCCACGTCGTTAAACCTGCCCCTGCGAGCCCGAGCAGCAACAGCACGTTGAACCAAGCCAGGAACGGAGGGAGGCACTA
CGCCGGCACGGGCTCCGACCGTAACAATCGCGTTCAAGTTGGCTGCCGGGAACTGCGATCTACCAAGTACATCTCAGAC
GGCCAGTGCACCAGCATCAATCCCCTGAAGGAGCTGGTGTGTGCTGGCGAATGCCTCCCCTTGCCGCTCCTGCCCAACT
GGATTGGAGGAGGTTATGGAACCAAGTACTGGAGCAGACGGAGCTCGCAAGAGTGGAGATGTGTCAATGACAAAACTCG
CACCCAGAGGATCCAGCTGCAGTGCCAGGATGGAAGTATAAGAACCTACAAAATAACTGTGGTCACGGCCTGCAAGTGC
AAGCGATACACCAGGCAGCACAACGAGTCCAGCCACAACTTTGAGGGAACCTCTCAAGCAAAGCCTGTCCAGCATCACA
AAGAGAGAAAAAGAGCCAGTAAATCCAGCAAACATAGTACAAGTTAGAAGTCAGACGTCCTCTCCTCTCCTGCTCCTCC
TGCCAAAACTGAACTCACCTGTAACCATTTGCTTTACAGTTCTGACTGCTTAAAGACAAGTCTGCCATTGCTTTGTTCT
CAGATGATACTGCACGCTTATTGTTTTGACCAAAATCAAAAGGGGCATTCTCAGCATATGGACCTTTTTGGGTGACTGT
CCAAAAGCTCAAGATGGGCAGTAACACAAGCCTTCTAAACCCTCACTTCAAAGTTTTACATTCCCTCCAGCCACGGAGG
CAAAGAAAAGTTGCCATGAATATTCACGGAAGTCTGTTTTGTAAAATGGTGCTTTGTTGTGTGTCTTCACGAGAACAGT
TTATTATCACTCCTATCGCCTTCTCTATCGATGTTTTATGAACTTCTGACAACAGCTTACAAATGCAACACCAACTATC
TGCTTTCAGATTCATTCTAAGAAAAGAATGCCTTGCATGCTGATCTTTCCCCTCAGTATACCAAAAATGAAAATATGCA
TGGCAGCAATCCAAAAGTAACGCGGAACAAACTATTTATTTGTTGTTGTAATTATTTAATGAGCTTTTGTATTATTTTT
GTTTAAAAGTGTGCAATCAAAAGACAGATATGACTTCCTTTCCAATTCATTGGTTTCTTTTTTTTTTTGTACAAAAATA
AACACTGCTAA
CitationMou C, Pitel F, Gourichon D, Vignoles F, Tzika A, Tato P, Yu L, Burt DW, Bed'hom B, Tixier-Boichard M, Painter KJ, Headon DJ. Cryptic patterning of avian skin confers a developmental facility for loss of neck feathering. PLoS Biol. 2011 Mar;9(3):e1001028. Epub 2011 Mar 15.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204373.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-39
stage 32
stage 32
stage 39
Feathers/Scutae
Widespread Expression
neck
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.9261

Mouse

EmageMGI:1913292
EurexpressMGI:1913292
MGI GXDMGI:1913292

Frog

Xenbase478255

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-050417-64, ZDB-GENE-060503-653
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