GEISHA - A Chicken Embryo Gene Expression Database
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WNT2
Wnt family member 2

Gene
Official SymbolWNT2
Official Full NameWnt family member 2
CGNC ID7121
also known asprotein Wnt-2|wingless-type MMTV integration site family member 2, WNT2
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_416013
PolypeptideXP_416013
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.32588
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human7472ENSG00000105989MIM:147870
Mouse22413ENSMUSG00000010797All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(3) MGI:98954
Xenopus100038261, 100491761, 378566, 378675486594, 960147
Zebrafish359837, 30127ENSDARG00000005050, ENSDARG00000041117ZDB-GENE-030717-2, ZDB-GENE-980526-416ZFIN:ZDB-GENE-030717-2, ZFIN:ZDB-GENE-980526-416
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene417769
Ensembl Gene
KEGGgga:417769

Entry 1

GEISHA IdWNT2.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATATCTGGTGGTGGTCTCTTCCCC
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGGCCTACATCCCTGTCCCTGATACcDNA Template Length834
Forward cDNA Template Probeshow
TTCTGACCGTTCGAAGTANTNAGGAAGCTGTCAAGTATCCACGTCATTCTTAGTTGGCTTCTTAAATCTCTTATTACCC
ACAGTTGAAACCCGCTGCCACTCTTGATTCATGACCACCTGAATCGCTCCATTGTATTTCTTCCACAGATAATCTCCTG
TTTTCCTAAAGTCCGCAATGGCCAGCCAACAGGTCCATAGAGTGCATGATCCACTCACACCGTGACATTTGCACTCCTG
TTTCAAAAACCGCTTCACGGCCTTCCTTCCTGCACGGCTGTTGTGGAGGTTCAGCAGCGCCCTGGCGTCCTTCCCTTTC
CTTTCCTTGGCATCCACGAAGGCACTGGCGAACTTAACGCCATAATCAATGTTGTCACTGCAGCCCCCCCAGTCGAAGC
GGCCCTTGCTGTCCTTGGCAGATCCCTTCATCTCAGGGTCACAGGAGCAGGACTTCAGCTCTCCCTGGCTGCACTGCCC
TCGTGATGGCAAGCACAACACCAGCAGAGGAGATGGCGTGAACGAACGCACACTCCCGGATGCCACCACGATGAAGCGA
CTCGCGGAGTCGCCCACAGCACCACGAGGGCAAGAGACCACCACCAGATATATTCTGCTTTCCTGAGGGTTAATTTATA
TTAGCAAA
CommentsLow level expression detected. Going to run with higher probe concentration.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 6
Lateral Plate Mesoderm
Paraxial Mesoderm
Low level expression detected.
Low level expression detected.
7-12
stage 7
stage 8
stage 12
Neural Plate/Tube
Paraxial Mesoderm
Sinus Venosus
Low level expression detected.
13-18
stage 13
stage 18
Foregut
Neural Plate/Tube
 
19-24
stage 20
stage 23
stage 24
stage 24
stage 24
Aorta
Eye
Foregut
Gut
Mesonephros
Notochord
Pharyngeal Arches and Clefts
Sclerotome
 
25
stage 25
Eye
Gut
Mesonephros
Pharyngeal Arches and Clefts
 

Entry 2

GEISHA IdWnt2.Fokina.2006Data SourcePublication
Complete cDNA Template Probeshow
CTCCGCTGGCGTTGTGTTTGCCATCACGAGGGCGTGCAGCCAGGGAGAGCTGAAGTCCTGCTCCTGTGACCCCGAGAAG
AAGGGCTCTGCCAAGGACAGCAAGGGCCGCTTCGACTGGGGCGGCTGCAGCGACAACATTGACTATGGCGTTAAGTTCG
CCAGGGCCTTCGTGGATGCCAAGGAAAGGAAAGGGAAGGACGCCAGGGCGCTGATGAACCTCCACAACAACCGTGCAGG
AAGGAAGGCCGTGAAGCGGTTTTTGAAACAGGAGTGCAAATGTCACGGTGTGAGTGGATCATGCACTCTAAGGACCTGT
TGGCTGGCCATGGCAGACTTTAGGAAAACAGGAGATTATCTGTGGAAGAAATACAATGGAGCGATTCAGGTGGTCATGA
ATCAAGATGGCACGGGTTTCACTGTGGCTAATAAGAGATTTAAGAAGCCAACTAAGAATGACCTGGTATACTTTGAAAG
CTCTCCAGACTACTGTATCAGGGACAGGGATGTAGGCTCTCCGGGGACGGCCGGCCGGGTGTGCAACCAGACGTCCCGC
GGCATGGACAGCTGTGAGGTGATGTGCTGCGGCCGTGGCTACGACACGTTGCGCGTCAGCAGGATGACCAAATGCGAGT
GCAAGTTCCACTGGTGCTGCGCGGTGCGCTGCCAGGACTGCCTGGAGGAGGTGGACATCCACACGTGCAAGGCGCCCAA
GGCTGCGGGCTGGGCCTCCCGGACATGATGTGTGGTGCTGGTCTGCG
CitationFokina VM, Frolova EI. Expression patterns of Wnt genes during development of an anterior part of the chicken eye. Dev Dyn. 2006 Feb;235(2):496-505.
CopyrightCopyright © 2008 Wiley-Liss, Inc.
CommentsSequence from Accession number identified in paper:AY753287.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 23
stage 23
Eye
Gut
Lens
Retina
 
25-29
stage 26
stage 29
Eye
Lens
Retina
 

Entry 3

GEISHA IdWnt2.Theodosiou.2003Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
CTCCGCTGGCGTTGTGTTTGCCATCACGAGGGCGTGCAGCCAGGGAGAGCTGAAGTCCTGCTCCTGTGACCCCGAGAAG
AAGGGCTCTGCCAAGGACAGCAAGGGCCGCTTCGACTGGGGCGGCTGCAGCGACAACATTGACTATGGCGTTAAGTTCG
CCAGGGCCTTCGTGGATGCCAAGGAAAGGAAAGGGAAGGACGCCAGGGCGCTGATGAACCTCCACAACAACCGTGCAGG
AAGGAAGGCCGTGAAGCGGTTTTTGAAACAGGAGTGCAAATGTCACGGTGTGAGTGGATCATGCACTCTAAGGACCTGT
TGGCTGGCCATGGCAGACTTTAGGAAAACAGGAGATTATCTGTGGAAGAAATACAATGGAGCGATTCAGGTGGTCATGA
ATCAAGATGGCACGGGTTTCACTGTGGCTAATAAGAGATTTAAGAAGCCAACTAAGAATGACCTGGTATACTTTGAAAG
CTCTCCAGACTACTGTATCAGGGACAGGGATGTAGGCTCTCCGGGGACGGCCGGCCGGGTGTGCAACCAGACGTCCCGC
GGCATGGACAGCTGTGAGGTGATGTGCTGCGGCCGTGGCTACGACACGTTGCGCGTCAGCAGGATGACCAAATGCGAGT
GCAAGTTCCACTGGTGCTGCGCGGTGCGCTGCCAGGACTGCCTGGAGGAGGTGGACATCCACACGTGCAAGGCGCCCAA
GGCTGCGGGCTGGGCCTCCCGGACATGATGTGTGGTGCTGGTCTGCG
CommentsAuthors indicated probe was 400 bp. As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #AY753287).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 24
stage 24
Foregut
Gizzard
 
31-32
stage 32
stage 32
Foregut
Gizzard
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.32588

Mouse

EmageMGI:98954
EurexpressMGI:98954
MGI GXDMGI:98954

Frog

Xenbase486594, 960147

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030717-2, ZDB-GENE-980526-416
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