GEISHA - A Chicken Embryo Gene Expression Database
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WNT3
Wnt family member 3

Gene
Official SymbolWNT3
Official Full NameWnt family member 3
CGNC ID49060
also known asproto-oncogene Wnt-3|wingless-type MMTV integration site family, member 3, Wnt3
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001081696
PolypeptideNP_001075165
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.99
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene374142
Ensembl GeneENSGALG00000001079
KEGGgga:374142

Entry 1

GEISHA IdWNT3.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATGCACAAAGGTCTTAGCGGGTTAC
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGCAGCAGGTCACAGCCATCAATCcDNA Template Length893
Forward cDNA Template Probeshow
GGGATAGGNCCACNNNNNNNNNCCCACGGGTAGGGGAGCTTCAGCTTCTGTCCCTTGTCCCAATGAGCGGCGTCTCTGG
GCCTTTTTTTGCAGAAATTCTGGCAGTTCTCATAGTAAACCAAATTCCCGTTTTTGTTGGTGGCCTTGAAAAAAGCAGA
CTTAGGCCGAAGAGTTTCTACCCAACCCCGGGACTCCAGGTGCTTCTCCACCACCATGTCGGAAGCACTGTCTGTATTT
ATCCTTCAGGTAATCCTGCGATGGTCCGAGAGTGTGGCTGAGCCCACCACAAAGTCTTGACCTCTCATCTTCCCCATAG
CCCCTGGCACTTGTGCTTTTGGTGCATGTGGTTCATAATGGTAGTCCTCCCGGCCTCTCTGTTGTGTCTGTTCATGGCC
GAGCGGGCCTCCGGAAGGTTCTCTCAAACGTCTGCGAATTCCCGGGGAACCAAAATTTGGTATGTTGCATCCTCGCTGC
ATCCACCACATTTCAAACCCTCTCCTGGAGGCCCTTTGTGGCGGGAGTCACAGCCACAAATGGTGGACGTGCACTACGC
TTCTGAACCAGTCACACCAGAGGTAACGCTGGCTGAGGCTATGGCGTGCATCAACGCACACTCCCGTGTGGGTTTACCC
AGGAGAGTCCCGGAGATGCGCCGATTGTCTTAAAGAGAGGTGCACTTTGCTTACGACATCGGAATGATAATGGCACTCA
CTCATGCCCTACTTCACAAACTCTTCCGCATTGGTAATGATTTTTAAGTACTTGCCGCAGACGCGAATCTGCTTGCTAA
CAAACTCCCCGAATTACCCCAAACGAACCCTAAACACCCTCGTATTGTACTGGTACCCAACAGCCAAGGACACCACATG
GGGAACCCGCTTAGACCTTGTGCCTTTTTTGGGGCTAATTTTTTAAAAAAANANNNNNNNNNCNNNNCNGCTCCGGTTC
TGTCCTTCTGTACCTGGCTGTTTTGCTAGCTTTGTCGTCGGCGGTCTCGGGGGGCTCCTGAGCGATCCATGATGCGGAA
TTGTATGGATCAACGGCATATGCGAGTCTACACTAACCGTCACCTGTATCCGTAGGCGTTATGTGTTTTATCGTTCTTG
TAGGTCTGTGGACCTGCGATTATTAAGTGTCTGAAATCTAGTTCGTTAAGACCTTACTTATATCGACATGAGGAGTTCA
TCGCGGTTACCCTGTATCCAATTGTTGTCAATGCACGGCTTGGTGACATGGCGGATCTATGTGGTGTCGTCCCATCGTG
CTTATTGCTCTTATGTCGCAGGGTCGAACATGACAGCATGGCTTGATAGTATCTATATACTAGGTATAACGTACGTATC
GAACTCTCTTGCATAAATCTATGTCCGTATACTTGCAGTGGTATGAATGATAAAGACATGGTTAATATGTCTATGAGGC
ATCTCTGAGAGTTGATACCTAACAATATTGACACTTTTCATACAGTGAGTGGACAATAATATGCGGCTTGCTTCTTATT
ACGAATATGATTTGATGGATACACGAGATATATGTTGCGGAGATCAGCGATAGTGTCTCGATTATATATC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
Diencephalon
Mesencephalon
Metencephalon
Myelencephalon
 
19-24
stage 20
stage 21
Diencephalon
Mesencephalon
Metencephalon
Myelencephalon
Spinal Cord
 
25-26
stage 25
stage 26
Forebrain
Hindbrain
Midbrain
 

Entry 2

GEISHA IdWnt3.Chapman.2004Data SourcePublication
Complete cDNA Template Probeshow
GCTGGAACTGCACCACCATCGATGACAGCCTGGCCATCTTTGGGCCTGTCCTGGACAAAGCCACACGGGAGTCTGCGTT
TGTCCACGCCATCGCGTCAGCCGGCGTTGCCTTTGCTGTGACCCGCTCCTGCGCCGAGGGCACGTCCACCATCTGCGGC
TGTGACTCCCACCACAAAGGGCCTCCAGGAGAGGGCTGGAAATGGGGTGGATGCAGCGAGGATGCCGACTTTGGTGTGT
TGGTGTCCCGGGAATTCGCAGACGCTCGAGAGAACCGTCCGGACGCGCGCTCGGCCATGAACAGACACAACAACGAGGC
CGGGAGGACGACCATTCTGGACCACATGCACCTGAAGTGCAAGTGCCACGGGCTCTCGGGAAGCTGCGAAGTCAAGACT
TGCTGGTGGGCACAGCCCGACTTTCGGGCCATCGGGGATTACCTGAAGGATAAATACGACAGTGCTTCCGAGATGGTGG
TGGAGAAGCACCGGGAGTCCCGGGGTTGGGTAGAAACTCTTCGGGCTAAGTATGCTCTTTTCAAGCCACCAACAGAGCG
GGATTTGGTTTACTATGAGAACTCCCCGAATTTCTGCGAGCCCAACCCAGAGACGGGCTCCTTTGGGACAAGGGACAGA
ACGTGCAACGTCACCTCCCATGGGATTGATGGCTGTGACCTGCTGTGCTGCGGTCGGGGCCACAACACCAGGACTGAGA
AAAGGAAGGAGAAGTGCCACTGCATCTTCCACTGGTGCTGCTATGTGAGCTGCCAGGAGTGCATACGTGTCTACGACGT
CCATACCTGCAAGTAAGCGTTGTACGTCTCCAGCTGCTGGGAGGCTGATCCAGAGCAGGGCCAGGGGCTCCTATCCTCA
GCACGGTGGCCTCACACTTCAGAGGATGGCATCAAGAAATCCGAGTGCTCTTGGCCCTACCCGCGCTCCTTGGCCACAT
CCCTCCAAGTCTGGGGCTCGTGTTAACATGGAGCACTGACCATTCCTGGCAGGCTCCTCCACAGCAAGGACAACGTAAC
AGAGTTCCAGTGCCAATTCTCACATGCCAGTGGTTTGACAGAGAAGTTGC
CitationChapman, S, Brown, R, Lees, L, Schoenwolf, G, Lumsden, A. Expression Analysis of Chick Wnt and Frizzled Genes and Selected Inhibitors in Early Chick Patterning. Dev Dyn. 2004 Mar;229(3):668-76.
CopyrightWiley-Liss, Inc. 2004
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # AY069983).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-5
stage 4
stage 4
stage 5
Primitive Streak
 

Entry 3

GEISHA IdWnt3.Chapman.2008Data SourceDirect Submission
Complete cDNA Template Probeshow
GCTGGAACTGCACCACCATCGATGACAGCCTGGCCATCTTTGGGCCTGTCCTGGACAAAGCCACACGGGAGTCTGCGTT
TGTCCACGCCATCGCGTCAGCCGGCGTTGCCTTTGCTGTGACCCGCTCCTGCGCCGAGGGCACGTCCACCATCTGCGGC
TGTGACTCCCACCACAAAGGGCCTCCAGGAGAGGGCTGGAAATGGGGTGGATGCAGCGAGGATGCCGACTTTGGTGTGT
TGGTGTCCCGGGAATTCGCAGACGCTCGAGAGAACCGTCCGGACGCGCGCTCGGCCATGAACAGACACAACAACGAGGC
CGGGAGGACGACCATTCTGGACCACATGCACCTGAAGTGCAAGTGCCACGGGCTCTCGGGAAGCTGCGAAGTCAAGACT
TGCTGGTGGGCACAGCCCGACTTTCGGGCCATCGGGGATTACCTGAAGGATAAATACGACAGTGCTTCCGAGATGGTGG
TGGAGAAGCACCGGGAGTCCCGGGGTTGGGTAGAAACTCTTCGGGCTAAGTATGCTCTTTTCAAGCCACCAACAGAGCG
GGATTTGGTTTACTATGAGAACTCCCCGAATTTCTGCGAGCCCAACCCAGAGACGGGCTCCTTTGGGACAAGGGACAGA
ACGTGCAACGTCACCTCCCATGGGATTGATGGCTGTGACCTGCTGTGCTGCGGTCGGGGCCACAACACCAGGACTGAGA
AAAGGAAGGAGAAGTGCCACTGCATCTTCCACTGGTGCTGCTATGTGAGCTGCCAGGAGTGCATACGTGTCTACGACGT
CCATACCTGCAAGTAAGCGTTGTACGTCTCCAGCTGCTGGGAGGCTGATCCAGAGCAGGGCCAGGGGCTCCTATCCTCA
GCACGGTGGCCTCACACTTCAGAGGATGGCATCAAGAAATCCGAGTGCTCTTGGCCCTACCCGCGCTCCTTGGCCACAT
CCCTCCAAGTCTGGGGCTCGTGTTAACATGGAGCACTGACCATTCCTGGCAGGCTCCTCCACAGCAAGGACAACGTAAC
AGAGTTCCAGTGCCAATTCTCACATGCCAGTGGTTTGACAGAGAAGTTGC
CommentsImages Provided by Susan Chapman.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
stage 3
stage 3
stage 3
stage 3
stage 3
stage 3
Primitive Streak
 
7-12
stage 8
stage 9
stage 10
stage 11
stage 12
stage 12
Central Nervous System
Forebrain
Primitive Streak
Tail
Unlabeled
 

Entry 4

GEISHA IdWnt3.Quinlan.2009Data SourcePublication
Complete cDNA Template Probeshow
GCTGGAACTGCACCACCATCGATGACAGCCTGGCCATCTTTGGGCCTGTCCTGGACAAAGCCACACGGGAGTCTGCGTT
TGTCCACGCCATCGCGTCAGCCGGCGTTGCCTTTGCTGTGACCCGCTCCTGCGCCGAGGGCACGTCCACCATCTGCGGC
TGTGACTCCCACCACAAAGGGCCTCCAGGAGAGGGCTGGAAATGGGGTGGATGCAGCGAGGATGCCGACTTTGGTGTGT
TGGTGTCCCGGGAATTCGCAGACGCTCGAGAGAACCGTCCGGACGCGCGCTCGGCCATGAACAGACACAACAACGAGGC
CGGGAGGACGACCATTCTGGACCACATGCACCTGAAGTGCAAGTGCCACGGGCTCTCGGGAAGCTGCGAAGTCAAGACT
TGCTGGTGGGCACAGCCCGACTTTCGGGCCATCGGGGATTACCTGAAGGATAAATACGACAGTGCTTCCGAGATGGTGG
TGGAGAAGCACCGGGAGTCCCGGGGTTGGGTAGAAACTCTTCGGGCTAAGTATGCTCTTTTCAAGCCACCAACAGAGCG
GGATTTGGTTTACTATGAGAACTCCCCGAATTTCTGCGAGCCCAACCCAGAGACGGGCTCCTTTGGGACAAGGGACAGA
ACGTGCAACGTCACCTCCCATGGGATTGATGGCTGTGACCTGCTGTGCTGCGGTCGGGGCCACAACACCAGGACTGAGA
AAAGGAAGGAGAAGTGCCACTGCATCTTCCACTGGTGCTGCTATGTGAGCTGCCAGGAGTGCATACGTGTCTACGACGT
CCATACCTGCAAGTAAGCGTTGTACGTCTCCAGCTGCTGGGAGGCTGATCCAGAGCAGGGCCAGGGGCTCCTATCCTCA
GCACGGTGGCCTCACACTTCAGAGGATGGCATCAAGAAATCCGAGTGCTCTTGGCCCTACCCGCGCTCCTTGGCCACAT
CCCTCCAAGTCTGGGGCTCGTGTTAACATGGAGCACTGACCATTCCTGGCAGGCTCCTCCACAGCAAGGACAACGTAAC
AGAGTTCCAGTGCCAATTCTCACATGCCAGTGGTTTGACAGAGAAGTTGC
CitationQuinlan R, Graf M, Mason I, Lumsden A, Kiecker C. Complex and dynamic patterns of Wnt pathway gene expression in the developing chick forebrain. Neural Dev. 2009 Sep 4;4:35.
CopyrightCopyright © 2009 Quinlan et al; licensee BioMed Central Ltd. [This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.]
CommentsAuthors indicated probe sequence can be obtained from NCBI (acc # AY069983).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 13
stage 16
Forebrain
Hindbrain
Isthmus/MHB
Midbrain
 
19-20
stage 20
Forebrain
Midbrain
 

Entry 5

GEISHA IdWNT3.Sienknecht.2009Data SourcePublication
Complete cDNA Template Probeshow
AGTGCAAGTGCCACGGGCTCTCGGGAAGCTGCGAGGTCAAGACTTGCTGGTGGGCACAGCCCGACTTTCGGGCCATCGG
GGATTACCTGAAGGATAAATACGACAGTGCTTCCGAGATGGTGGTGGAGAAGCACCGGGAGTCCCGGGGTTGGGTAGAA
ACTCTTCGGGCTAAGTATGCTCTTTTCAAGCCACCAACAGAGCGGGATTTGGTTTACTATGAGAACTCCCCGAATTTCT
GCGAGCCCAACCCAGAGACGGGCTCCTTTGGGACAAGGGACAGAACGTGCAACGTCACCTCCCATGGGATTGATGGCTG
TGACCTGCTGTGCTGCGGTCGGGGCCACAACACCAGGACTGAGAAAAGGAAGGAGAAGTGCCACTGCATCTTCCACTGG
TGCTGCTATGTGAGCTGCC
CitationSienknecht UJ, Fekete DM. Mapping of Wnt, frizzled, and Wnt inhibitor gene expression domains in the avian otic primordium. J Comp Neurol. 2009 Dec 20;517(6):751-64.
CopyrightCopyright © (2002 Wiley-Liss); This material is used by permission of Wiley-Liss, Inc., a subsidiary of John Wiley & Sons, Inc.
CommentsAccession # given in the paper.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-23
stage 20
stage 20
stage 23
stage 23
Ear/Otic Placode
 

Entry 6

GEISHA IdWNT3.Robertson.2004Data SourcePublication
Complete cDNA Template Probeshow
GCTGGAACTGCACCACCATCGATGACAGCCTGGCCATCTTTGGGCCTGTCCTGGACAAAGCCACACGGGAGTCTGCGTT
TGTCCACGCCATCGCGTCAGCCGGCGTTGCCTTTGCTGTGACCCGCTCCTGCGCCGAGGGCACGTCCACCATCTGCGGC
TGTGACTCCCACCACAAAGGGCCTCCAGGAGAGGGCTGGAAATGGGGTGGATGCAGCGAGGATGCCGACTTTGGTGTGT
TGGTGTCCCGGGAATTCGCAGACGCTCGAGAGAACCGTCCGGACGCGCGCTCGGCCATGAACAGACACAACAACGAGGC
CGGGAGGACGACCATTCTGGACCACATGCACCTGAAGTGCAAGTGCCACGGGCTCTCGGGAAGCTGCGAAGTCAAGACT
TGCTGGTGGGCACAGCCCGACTTTCGGGCCATCGGGGATTACCTGAAGGATAAATACGACAGTGCTTCCGAGATGGTGG
TGGAGAAGCACCGGGAGTCCCGGGGTTGGGTAGAAACTCTTCGGGCTAAGTATGCTCTTTTCAAGCCACCAACAGAGCG
GGATTTGGTTTACTATGAGAACTCCCCGAATTTCTGCGAGCCCAACCCAGAGACGGGCTCCTTTGGGACAAGGGACAGA
ACGTGCAACGTCACCTCCCATGGGATTGATGGCTGTGACCTGCTGTGCTGCGGTCGGGGCCACAACACCAGGACTGAGA
AAAGGAAGGAGAAGTGCCACTGCATCTTCCACTGGTGCTGCTATGTGAGCTGCCAGGAGTGCATACGTGTCTACGACGT
CCATACCTGCAAGTAAGCGTTGTACGTCTCCAGCTGCTGGGAGGCTGATCCAGAGCAGGGCCAGGGGCTCCTATCCTCA
GCACGGTGGCCTCACACTTCAGAGGATGGCATCAAGAAATCCGAGTGCTCTTGGCCCTACCCGCGCTCCTTGGCCACAT
CCCTCCAAGTCTGGGGCTCGTGTTAACATGGAGCACTGACCATTCCTGGCAGGCTCCTCCACAGCAAGGACAACGTAAC
AGAGTTCCAGTGCCAATTCTCACATGCCAGTGGTTTGACAGAGAAGTTGC
CitationRobertson CP, Braun MM, Roelink H. Sonic hedgehog patterning in chick neural plate is antagonized by a Wnt3-like signal. Dev Dyn. 2004 Mar;229(3):510-9.
CopyrightCopyright © 2004 Wiley-Liss, Inc.
CommentsAuthors indicated probe was 1100 cDNA submitted as NCBI Acc# AY069983.1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 1
  
7-12
stage 12
Unlabeled
 
13-18
stage 14
stage 17
stage 18
Diencephalon
Spinal Cord
dorsal thalamus
19-21
stage 19
stage 21
stage 21
stage 21
stage 21
stage 21
Diencephalon
Neural Plate/Tube
Spinal Cord
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.99

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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