GEISHA - A Chicken Embryo Gene Expression Database
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YY1
YY1 transcription factor

Gene
Official SymbolYY1
Official Full NameYY1 transcription factor
CGNC ID51971
also known asNF-E1, YY-1, YY2, transcriptional repressor protein YY1|Delta transcription factor|INO80 complex subunit S|YY2 transcription factor|Yin and yang 1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_001031210
PolypeptideNP_001026381
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human7528MIM:600013
Mouse22632ENSMUSG00000021264All phenotypic alleles (5):Targeted, knock-out(1) Targeted, other(4) MGI:99150
Xenopus100126440, 447228, 394372961262
Zebrafish322397, 406394ENSDARG00000042796, ENSDARG00000027978ZDB-GENE-030131-1117, ZDB-GENE-040426-2127ZFIN:ZDB-GENE-030131-1117, ZFIN:ZDB-GENE-040426-2127
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene423455
Ensembl Gene
KEGGgga:423455
GEISHA IdYY1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATAGCAGCAAGAAGAGTTACCTGAGC
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGTGAAACGGGATTACAGAGCAAGGcDNA Template Length968
Complete cDNA Template Probeshow
TTTTTTAAAAATCTGGGCCGCAGAATTAGCAGCAGAAGAGTTCCTACGGGGGAGGCGGCGGCGGGGCCGAGGGCGGCGG
CGGCAGGAAATGGGAGCAGAAGCAGGTGCAGATCAAGACCCTGGAGGGGGAGTTCTCGGTCACCATGTGGGCCTCGGAT
GATAAAAAAGATATTGACCATGAAACAGTGGTGGAAGAGCAGATCATTTGGAGAGAATTCTCCTCCAGATTACTCAGAG
TACATGACAGGAAAGAAGCTTCCTCCTGGTGGAATACCTGGCATTGACCTCTCGGACCCTAAGCAGCTGGCTGAATTTG
CTAGAATGAAGCCAAGAAAAATTAAGGAAGATGATGCTCCACGTACGATAGCTTGTCCTCACAAAGGCTGCACAAAGAT
GTTCAGGGACAACTCTGCTATGAGGAAGCATCTGCACACTCATGGCCCTCGAGTACATGTATGTGCAGAATGTGGCAAA
GCCTTTGTGGAGAGCTCGAAACTAAAGCGACATCAACTAGTTCATACTGGAGAGAAACCCTTTCAGTGTACATTTGAAG
GATGTGGAAAGCGTTTTTCACTGGACTTCAATTTACGCACACATGTGCGAATTCATACTGGCGACAGGCCCTATGTTTG
CCCATTTGATGGCTGCAATAAGAAGTTTGCGCAATCAACTAACCTGAAATCTCACATTTTAACACATGCTAAGGCCAAA
AACAACCAGTGAAAGTTGGAGGAAAAGTTCTTGAACTCAAACCATCTTACAGGGAGAATGAATTGAAAATAAATACGCT
TCCCCTTTGGTATATTGTTTCTAGGAAAGAATTTTAAAAAAAAAGAACCCTACAACCTAAAGGGACATGTTTTGATAAG
TAGTAAATAAAAAGCAAAAACTTTCGGGCATTGCTGAGGATGCTCTACCTTGCCTGTAATCCCTTTCCCCTTAGGGGGT
ATTTTTTCAGAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Area Pellucida
 
4-6
stage 4
stage 5
stage 6
stage 6
Area Pellucida
Neural Plate/Tube
 
7-12
stage 7
stage 8
stage 9
stage 10
stage 12
Area Pellucida
Blood Islands
Blood Vessels
Head Mesenchyme
Headfold
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
HH 10-
13-18
stage 17
Widespread Expression
 
19-24
stage 20
stage 22
stage 24
Leg
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Widespread Expression
Wing
Low level widespread expression.

Mouse

EmageMGI:99150
MGI GXDMGI:99150

Frog

Xenbase961262

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-1117, ZDB-GENE-040426-2127
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