GEISHA - A Chicken Embryo Gene Expression Database
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PGK1
phosphoglycerate kinase 1

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolPGK1
Official Full Namephosphoglycerate kinase 1
CGNC ID49503
also known asPGK, PGK2, phosphoglycerate kinase|phosphoglycerate kinase 2, Phosphoglycerate kinase
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204985
PolypeptideNP_990316
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.8606
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly33461FBgn0250906
Human5230MIM:311800MIM:311800
Mouse18655ENSMUSG00000062070MGI:97555
Xenopus549299, 446763947125
Zebrafish406696ENSDARG00000054191ZDB-GENE-040426-2711ZFIN:ZDB-GENE-040426-2711
Gene Ontology
Molecular FunctionATP binding, phosphoglycerate kinase activity
Biological Processcarbohydrate metabolic process, gluconeogenesis, glycolysis, phosphorylation, more...small molecule metabolic process
Cellular Componentchromosome, cytosol
Links to other databases
Entrez Gene395833
Ensembl Gene
KEGGgga:395833

Entry 1

GEISHA IdZ12Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GCGGCGGTAGGGAACGGACGGCAGCGGTGACTTGCGGTAACCATGTCTCTCTCCAACAAGCTCACCCTGGATAAGGTGG
ATGTGAAGGGCAAGCGGGTCGTCATGAGGGTTGACTTCAATGTTCCAATGAAGGATCACAAAATAACCAACAACCAAAG
AATCAAGGCAGCTGTCCCTACCATCAAGCACTGCTTGGACCATGGAGCCAAGTCAGTGGTTTTGATGAGTCACCTGGGC
CGCCCGGATGGAGTTCCCATGCCTGACAAGTTCTCCTTGGCTCCAGTAGCTGTGGAGCTTAAAGCTCTCCTGGGCAGGG
AGGTCTCATTCCTGAAGGATTGTGTTGGTCCTGAGGTGGAGAAGGCCTGTGCTAATCCTGCAAACGGCTCCGTCATCCT
GCTAGAGAACCTCCGATTCCATGTAGAAGAAGAAGGGAAAGGGAAGGATGCTTCANGGAACAAGATCAAAGCTGATGCT
GCAAAAGTGGAGGCTTTCAGAGCCTCTCTTTCTAAATTGGGAGATGTTTATGTCAATGATGCTTTTGGAACTGCCCATC
GTGCTCACAGCTCCA
CommentsWidespread expression stages 4-25.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-8
stage 8
Widespread Expression
maybe not in notochord or floor plate

Entry 2

GEISHA IdPGK.21A6Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
CAGCGGTGACTTGCGGTAACCATGTCTCTCTCCAACAAGCTCACCCTGGATAAGGTGGATGTGAAGGGCAAGCGGGTCG
TCATGAGGGTTGACTTCAATGTTCCAATGAAGGATCACAAAATAACCAACAACCAAAGAATCAAGGCAGCTGTCCCTAC
CATCAAGCACTGCTTGGACCATGGAGCCAAGTCAGTGGTTTTGATGAGTCACCTGGGCCGCCCGGATGGAGTTCCCATG
CCTGACAAGTTCTCCTTGGCTCCAGTAGCTGTGGAGCTTAAAGCTCTCCTGGGCAGGGAGGTCTCATTCCTGAAGGATT
GTGTTGGTCCTGAGGTGGAGAAGGCCTGTGCTAATCCTGCAAACGGCTCCGTCATCCTGCTAGAGAACCTCCGATTCCA
TGTAGAAGAAGAAGGGAAAGGGAAGGATGCTTCAGGGAACAAGATCAAAGCTGATGCTGCAAAAGTGGAGGCTTTCAGA
GCCTCTCTTTCTAAATTGGGAGATGTTTATGTCAATGATGCTTTTGGAACTGCCCATCGTGCTCACAGCTCCATGGTAG
GTGTTCATCTTCCTCAGAAGGCTGCTGGCTTCCTGATGAAGAAAGAACTGGATTATTTTGCAAAGGCCCTTGAGAGTCC
AGAGAGACCCTTCTTAGCAATTCTTGGAGGAGCTAAAGTTCAGGATAAGATCCAGCTGATCAGTAACATGTTAGATAAG
GTCAACGAGATGATCATTGGTGGTGGAATGGCATTCACCTTTCTCAAAGTGTTAAACAACATGCAGATTGGCAACTCGC
TGTTTGATGAAGAGGGATCAAAAATTGTCAAGGACCTGATGGCCCAAGCAGAGAAGAACGGTGTGAAGATAACCTTGCC
AATTGAACTCATCACTGCAGACAAATTTGATGAGCATGCACAGACTGGGGGAGCCACAGTGGCTTCAGGCATTCCTGCT
TGCTGGATGGGCCTGAACTGCGCCCCTAAAATGTTTAAAAATTTTGTGTAAATTGTGGGAAGGGCAAACAAATANTGGT
GAACGTTCCGTTTGAATCTTTAATGGGACAAGTCCCCAAGGAACAAAGCCCTGAGGAAAAATGGGGAATTAATGGAAGG
GCGGCCCCATATTTGGGGGGGAAACCGCACCTCCTTGCGATGGAATACTAAATAATTTCCCCTTACCTG
Commentsno specific expression detected stages 4-25, widespread.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-20
stage 20
Widespread Expression
not in yolk stalk

Entry 3

GEISHA IdPGK.Adams.2008Data SourcePublication
Complete cDNA Template Probeshow
ACCAAAACCTCCCCAGTTCACGAGCAGCATCGCCAAGCGTCAGAGCGCGGGCGGCGGCGGTAGGGAACGGACGGCAGCG
GTGACTTGCGGTAACCATGTCTCTCTCCAACAAGCTCACCCTGGATAAGGTGGATGTGAAGGGCAAGCGGGTCGTCATG
AGGGTTGACTTCAATGTTCCAATGAAGGATCACAAAATAACCAACAACCAAAGAATCAAGGCAGCTGTCCCTACCATCA
AGCACTGCTTGGACCATGGAGCCAAGTCAGTGGTTTTGATGAGTCACCTGGGCCGCCCGGATGGAGTTCCCATGCCTGA
CAAGTTCTCCTTTTCTCCAGTAGCTGTGGAGCTTAAAGCTCTCCTGGGCAGGGAGGTCTCATTCCTGAAGGATTGTGTT
GGTCCTGAGGTGGAGAAGGCCTGTGCTAATCCTGCAAACGGCTCCGTCATCCTGCTAGAGAACCTCCGATTCCATGTAG
AAGAAGAAGGGAAAGGGAAGGATGCTTCAGGGAACAAGATCAAAGCTGATGCTGCAAAAGTGGAGGCTTTCAGAGCCTC
TCTTTCTAAATTGGGAGATGTTTATGTCAATGATGCTTTTGGAACTGCCCATCGTGCTCACAGCTCCATGGTAGGTGTT
CATCTTCCTCAGAAGGCTGCTGGCTTCCTGATGAAGAAAGAACTGGATTATTTTGCAAAGGCCCTTGAGAGTCCAGAGA
GACCCTTCTTAGCAATTCTTGGAGGAGCTAAAGTTCAGGATAAGATCCAGCTGATCAGTAACATGTTAGATAAGGTCAA
CGAGATGATCATTGGTGGTGGAATGGCATTCACCTTTCTCAAAGTGTTAAACAACATGCAGATTGGCAACTCGCTGTTT
GATGAAGAGGGATCAAAAATTGTCAAGGACCTGATGGCCAAGGCAGAGAAGAACGGTGTGAAGATTACCTTGCCAGTTG
ACTTCATCACTGCAGACAAATTTGATGAGCATGCACAGACTGGGGAAGCCACAGTGGCTTCAGGCATTCCTGCTGGCTG
GATGGGCTTGGACTGCGGCCCTGAAAGTGTTAAGAAGTTTGTTGAAGTTGTGGGAAGGGCCAAACAAATAGTGTGGAAC
GGTCCAGTTGGAGTCTTTGAATGGGACAAGTTCTCCAAAGGAACCAAAGCCCTGATGGACAAAGTGGTGGAAGTAACTG
GAAAGGGCTGCATCACCATTATTGGTGGTGGAGATACTGCTACATGCTGTGCGAAGTGGAATACTGAAGATAAAGTTAG
CCACGTTAGCACTGGAGGTGGTGCCAGCCTGGAACTGCTAGAGGGTAAGGTTCTTCCTGGCGTGGATGCCTTGAGCAGT
GTGTAGAGAACAGCGTATCACCCCAGTTCCTGTTCCTGTGCACAGCCCCTGAGATTCAACACTTCAACACTTCTATGCT
TCTGTATTTCAACTCTGCGATAGGCAGACCG
CitationAdams MS, Gammill LS, Bronner-Fraser M. Discovery of transcription factors and other candidate regulators of neural crest development. Dev Dyn. 2008 Apr;237(4):1021-33.
CopyrightCopyright © 2008 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204985).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 11
stage 12
Anterior Intestinal Portal
Blood Islands
Forebrain
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Crest
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.8606

Mouse

EmageMGI:97555
EurexpressMGI:97555
MGI GXDMGI:97555

Frog

Xenbase947125

Fruit Fly

BDGPFBgn0250906

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040426-2711
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