GEISHA - A Chicken Embryo Gene Expression Database
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DNMT1
DNA methyltransferase 1

Gene
Official SymbolDNMT1
Official Full NameDNA methyltransferase 1
CGNC ID20270
also known asDNA (cytosine-5)-methyltransferase 1|DNA (cytosine-5-)-methyltransferase 1|DNA MTase GgaI|DNA MeTase|DNA methyltransferase GgaI|MCMT|m.GgaI
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_206952
PolypeptideNP_996835
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.1206
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Functionchromatin binding, DNA binding, DNA (cytosine-5-)-methyltransferase activity, transcription factor binding, more...zinc ion binding
Biological Processregulation of transcription, DNA-templated, transcription, DNA-templated
Cellular Componentnucleus
Links to other databases
Entrez Gene396011
Ensembl Gene
KEGGgga:396011
GEISHA IdcDNMT1.Rengaraj.2011Data SourcePublication
Complete cDNA Template Probeshow
CTGAGATGCCCTCCCCCAAGAAGATGCTGCAGGGGAGGAAGAAGAAGCAGAACAAGAGCCGCATCTCCTGGGTGGGAGA
ACCCATCAAGAGCGATGGGAAGAAGGATTTCTACCAGAGGGTCTGCATTGACTCCGAGACCCTGGAGGTGGGAGACTGC
GTCTCCGTCAGCCCCGACGATCCCACCAAACCCCTCTACCTCGCCAGGGTGACGGCCATGTGGGAGGACAGCAGCGGGC
AGATGTTCCATGCCCATTGGTTCTGCCCTGGTTCCGACACCGTCCTGGGGGCCACCTCGGACCCTCTGGAGCTCTTCTT
GGTGGACGAATGCGAGGACATGCAGCTGTCCTACATCCACGGCAAAGTCAACGTCATCTACAAACCCCCATCGGAAAAC
TGGGCCATGGAGGGCGGGTTGGACATGGAGATCAAGATGGTGGAGGACGACGGGAGGAC
CitationRengaraj D, Lee BR, Lee SI, Seo HW, Han JY. Expression Patterns and miRNA Regulation of DNA Methyltransferases in Chicken Primordial Germ Cells. PLoS One. 2011; 6(5): e19524.
CopyrightCopyright Rengaraj et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
CommentsThe probe was amplified by PCR using the following primers: 5′CTGAGATGCCCTCCCCCAAG3′ and 5′-GTCCTCCCGTCGTCCTCCAC-3′ and was extracted from NCBI Acc# NM_206952.1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 1
Area Opaca
EG&K stage X
4-6
stage 6
Neural Plate/Tube
 
7-12
stage 12
stage 12
Blood Vessels
Neural Plate/Tube
Paraxial Mesoderm
Spinal Cord
 
19-24
stage 24
Gonad
 
25-30
stage 29
stage 29
stage 29
Ovary
Testis
 
31-44
stage 35
stage 35
stage 36
stage 36
stage 38
stage 38
stage 40
stage 40
stage 44
stage 44
stage 44
stage 44
stage 44
stage 44
stage 44
stage 44
Ovary
Testis
Unlabeled
HH stage 36+
HH stage 38 plus
HH stage 38+
HH stage 40+
Hatched 1 day
Hatched 1 day testis
Hatched 12 weeks
Hatched 12 weeks, testis
Hatched 25 weeks
Hatched 25 weeks, testis
testis
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.1206

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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