GEISHA - A Chicken Embryo Gene Expression Database
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CCNE1
cyclin E1

Gene
Official SymbolCCNE1
Official Full Namecyclin E1
CGNC ID3317
also known asG1/S-specific cyclin-E1|cyclin E
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001031358
PolypeptideNP_001026529
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.14522
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly34924FBgn0010382
Human898ENSG00000105173MIM:123837
Mouse12447ENSMUSG00000002068All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:88316
Xenopus549082, 397841972041
Zebrafish30188ENSDARG00000011133ZDB-GENE-980526-168ZFIN:ZDB-GENE-980526-168
Gene Ontology
Molecular Functionprotein kinase binding
Biological Processcell division, G1/S transition of mitotic cell cycle, more...regulation of cyclin-dependent protein serine/threonine kinase activity
Cellular Componentnucleus
Links to other databases
Entrez Gene426117
Ensembl Gene
KEGGgga:426117

Entry 1

GEISHA IdCCNE1Data SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGCTCCAAATGCTGCTATTGAGG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGATCCAGACACTGACCAGGAAGTTCcDNA Template Length607
Complete cDNA Template Probeshow
GCTCCAAATGCTGCTATTGAGGGTGATGCTTGATGTGACCAACTGTTCAGAAAAAAAGGCTTCAAGTTTAGGTTATTTA
CCGTGCCTGTTTGTCTCTGGAATAATCAGCAGTTATGCTGTCCCCTGTTGACAACTGGGCAAAACGTGCTGTGCAAGGC
GACATTTCAAAGCCTCTTTTTCAAATGGTTGGCTTACAACCTGATGCCTTTTTAAAAAAAAAAAACTCTTTATTGTAAA
TGCTGCTATGTCTCTGTGTATCCATTTTTAATAAAAATGCTGTCTAAGACAGCTGGTTTTATGTATATTCCTATTTTTC
TCTTGATTATGGTCAACTAAGGTTTTTCAGACTGTGACCACTAGTGTAGCGTGGGAATTGGGTGCAACGAATATAGTAA
CTATCATCTTATTTATTTAGCACTACTAGCTTACCAATGGAAGTTTCGTTTTTTGGATACTAAGATGAATTTTTATGTT
GATTTAGATTTTCCTTATTGAGTTGCACATGACAAGAGAGGGGATAATAGACGTGGCAGGTGTTTGGGGAATCCTTCCA
CAACACACATGCCCATGATCACTCTCTTGGGAACTTCCTGGTCAGTGTCTGGAT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
Unlabeled
 
13-18
stage 14
Unlabeled
 
19-24
stage 19
stage 20
stage 20
Unlabeled
 
25
stage 25
Foregut
Head Mesenchyme
Lung
Sclerotome
Spinal Ganglia and Nerves
 

Entry 2

GEISHA IdcyclinE1.Olivera-Martinez.2014Data SourcePublication
Complete cDNA Template Probeshow
GCGCCCTCGGCTCCGCTCGTGCCCGCGGGCCGGCGGCGGGCACGATGCGGCGGGAGAGCGACTGCGCGGAGGAGAAGGC
TCCCGCCAAGGGGGAAGGGGGCGCCGAGGGGACCGTGCGGGCCCGCAAGAGGAAAGCCGATGTGGCCACGTTCCTCCAG
GATCCCGACGAAGAAATTGCCAAAATTGAAATGAGTAGAAAAAAGCAATACGAAAACCAGCTGTCCTGGAATAACATTA
ACAAAGATCCCCATATGCTGATTCCTACTCCAGATAAAGATGATGATCCAGTTGGTGTTGATTACTCTCACTTCATACA
TCTGAATGTTGCTTCAACTAGATCTTCACCGCTACCAATTCTGGGCTGGGCAAACAGAGATGATGTATGGAAAAACATG
ATAAACAAAGAGGAGACTTATGTGAGGGATAAACTATATATGCAAAGGCACCCTCTCCTGCAACCTAAAATGCGAACAA
TCCTTCTAGACTGGCTAATGGAGGTTTGTGAAGTCTACAAGCTTTATAGAGAAACATTTTATTTAGCACAAGATTTCTT
TGATAGGTTTATGGCAACACAACAGAATGTTGTAAAAACACTATTGCAACTTATTGGGATCTCTTCTTTATTCATAGCA
GCAAAGCTTGAGGAAATTTATCCACCAAAGTTGCACCAGTTTGCCTATGTTACAGATGGAGCCTGTACAGAAGATGAAA
TCCTCAGTATGGAATTGATCATTATGAAGGCTCTTAATTGGAACTTAAATCCACTGACAGTTGTATCATGGCTAAACAT
TTACATGCAAGTTGCCTATTTAAATGAGCTTTACGAGGTATTGTTGCCACAATATCCACAACAAATATTTGTACAAATA
GCAGAGCTCTTGGATCTCTGTGTGCTGGATATTGGCTGCTTGGAATATACATATGGTGTACTTGCAGCTTCTGCTTTGT
ACCACTTCTCCTCATCTGAGTTGATGCAGAAAGTTTCAGGTTATGAATGGTGTGAGATAGAGGAATGTGTCAAATGGAT
GGTTCCATTTGCTATGGCTATAAGGGAAGTAGGAAGCTCCAAACTCAAACACTTTAGAGGTATAGCTCCTGAAGACTTG
CACAATATACAGACGCACATAAACAGCTTGGATTTGCTGGACAAAGCTCAAGCAAAACAAGCCATATTGGCTGAGCAAA
ATAGGACTTCACCTTTCCCCACTGGTGTCCTTACGCCACCACAAAGCAGTAAGAAGCAGCCCGCTGGACTGAAGCCGAT
ATGACTGTACGAACTGTTTACAGATGATTTTGCTGAAGTGCCTGTTCTGCTGGTTCTAACTCCTGCTCCATTATGGAAA
TGCTGCCGGTGACATTCTAAAGCTTTTATGGAATTTGAAAAAGGAAACCTTATCTTTTTCACGACAGAAGATTTTTTTT
TTTCTATTTGAAATATTTTTATTGAACGTTAAAATATTTTATAGAAATGGATCGAGTACGCCAGCCACTTAAAAGAACA
CCGAAGAGTGCTCCAAATGCTGCTATTGAGGGTGATGCTTGATGTGACCAACTGTTCAGAAAAAAAGGCTTCAAGTTTA
GGTTATTTACCGTGCCTGTTTGTCTCTGGAATAATCAGCAGTTATGCTGTCCCCTGTTGACAACTGGGCAAAACGTGCT
GTGCAAGGCGACATTTCAAAGCCTCTTTTTCAAATGGTTGGCTTACAACCTGATGCCTTTTTAAAAAAAAAAAACTCTT
TATTGTAAATGCTGCTATGTCTCTGTGTATCCATTTTTAATAAAAATGCTGTCTAAGACAGCTGGTTTTATGTATATTC
CTATTTTTCTCTTGATTATGGTCAACTAAGGTTTTTCAGACTGTGACCACTAGTGTAGCGTGGGAATTGGGTGCAACGA
ATATAGTAACTATCATCTTATTTATTTAGCACTACTAGCTTACCAATGGAAGTTTCGTTTTTTGGATACTAAGATGAAT
TTTTATGTTGATTTAGATTTTCCTTATTGAGTTGCACATGACAAGAGAGGGGATAATAGACGTGGCAGGTGTTTGGGGA
ATCCTTCCACAACACACATGCCCATGATCACTCTCTTGGGAACTTCCTGGTCAGTGTCTGGATCGTTGTATTTAATAGC
AAGAAGCAATGGGGAAAGAAGGTTGCCTTTATTTTAAATGTAATGATTTAAACTTTGGGATTTTGGCGTATACTTTGAC
AAGAA
CitationIsabel Olivera-Martinez, Nick Schurch, Roman A Li, Junfang Song, Pamela A Halley, Raman M Das, Dave W Burt, Geoffrey J Barton, Kate G Storey. Major transcriptome re-organisation and abrupt changes in signalling, cell cycle and chromatin regulation at neural differentiation in vivo. Development 2014 Aug;141(16):3266-76. Epub 2014 Jul 25. DOI: 10.1242/dev.112623.
CopyrightCopyright © 2014. Published by The Company of Biologists Ltd.
CommentsAuthors indicated the probe was made from gene construct provided by G. Martin. As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (accession number NM_001031358.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
Neural Plate/Tube
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.14522

Mouse

EmageMGI:88316
EurexpressMGI:88316
MGI GXDMGI:88316

Frog

Xenbase972041

Fruit Fly

BDGPFBgn0010382

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-980526-168
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