GEISHA - A Chicken Embryo Gene Expression Database
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HDAC7
histone deacetylase 7

Gene
Official SymbolHDAC7
Official Full Namehistone deacetylase 7
CGNC ID4743
also known asHDAC7A, histone deacetylase 7|histone deacetylase 7A
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_001031402
PolypeptideNP_001026573
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human51564ENSG00000061273MIM:606542
Mouse56233ENSMUSG00000022475All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(3) MGI:1891835
Xenopus100158627488661
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene426885
Ensembl Gene
KEGGgga:426885

Entry 1

GEISHA Idpgn1c.pk009.g4Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GATGGAGGCTGGGGCTGAGAGCAGTGAGCAGGCGAGGGCACGTGTGGAGCCCACACGGCCAGGGAGCAGCGGGAAGGAG
CCTGAGAGACCTCAGAAGATGCTGCAGCCTCAGGAGGAGCTCATCCTCCAGCAGGCCTATCTCTGGGACCCCTACCAGC
GTGTGCAGCACCAGCTCCTCAAGCGGCAGCCCCTGGCTGACTCCCCCATGGTCCCGGCTGTCCTCGCAGGGCACAGACC
TCTCTCCAGGGCCCAGTCATCTCCTGCCACCGCGACTGTCTCCCTCCCTGCCCAGGATACAACCTCCAAGGCACTCTCC
CTGCCGGTGCAGGAGCAGACCACCAAGCCCCATTTCACAACAGGACTGGTTTATGACTCGGTGATGCTCAAACACCAGT
GCTCCTGTGGTGACAACAGCAACCACCCAGAGCACGCGGGTAGGATTCAGAGCATCTGGTCCCGACTTCAGGAGAGGGG
TCTGCGCAGCCAGTGTGAGTGTCTGCGGGGACGCAAGGCCACCCTGGAGGAGCTGCAGTGTGTCCACACTGAACGCCAC
GTCTTCCTCTATGGCACCAATCCCCTCAACCGCCTGAAACTGGACAATGGGAAGCTGGCAGGGATTCTGTCACAGCGGA
TGTTTGTCATGCTGCCCTGTGGAGGGGTGGGGGTGGACAGTGATACCATCTGGAATGAGCTGCACTCCTCCAACGCAGC
CCGCTGGGCTGCAGGCAGTGTCACCGAGTTT
CommentsNo specific expression detected between stages 8-20.
no images

Entry 2

GEISHA IdHDAC7.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCAGGACAGTGGTGATGCCAATC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGCAGAGGGAGGTTGATGCTTTCCcDNA Template Length754
Forward cDNA Template Probeshow
AATCNGTCCGANCAGGAAGCCGTTCTCCTGGGGTGGCTGCAGGAAGGATCCTTTCTTGGATACGTGGCAGCCAAAGGTC
CAGCCCCTTTCAGGACCGTGACTCAGGGAGTGAGTGGCAAATGGGAAGCCAGGAGTGAAGAGCGAGCACTGGGCTCGGG
AAGAGTCCAACCACGTCCTGGAAGCAGGGGAGCAGAGAACATCACCGCTCATCACTGGTTCATGGGCTCCTCCTCCTCC
ATAGGCTCATCTTGTGGCCTCTTCTCCACCATCACAGCCACTGAGAGGGAGGCCAAGGCTGTGACCGTCTCCACCTCTT
CTGCCTCGTGGTGCTGAGCCTCCAGGAAGGAGCAGCTCAGCTTGGAGGCGAAGCGCTGCACGGCCACCCAGTATTTACT
CTGGACCTGGATCACTGCTTCCAAGGAGCGCACAGCATTGGCATTGGGCTTCTGCCGCATGCTTTCTTCTGGGAGAGGG
TCCAGCTCATTGCCCAGCAAGGCTGACACGCAGGCTTCAGATGCATCACAGATGGCCGTGAGGTCGTGGCCGCCTTCCA
GCGCCAGGACGATGGCCCCCCCAGCCAGGCTCATCAGCTGCTTGGTCATGTAGCCAAAACATTTAGCAGAGACTTTGTA
GCCACCCAGGGGTGGTGGGTGGCCATCAGCTGCATCGAAGCCAGCTGATACCAGCACCACGTCGGGGGAGAATTCATGT
GCGATTGGCATCACACC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
Epiblast
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak
Low level expression.
7-12
stage 7
stage 8
stage 10
stage 11
stage 12
Amnion
Anterior Intestinal Portal
Blood Islands
Blood Vessels
Ear/Otic Placode
Extraembryonic
Extraembryonic Mesoderm
Eye
Forebrain
Head Mesenchyme
Headfold
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Sinus Venosus
Somatic Mesoderm
 
13-18
stage 14
stage 15
stage 16
Blood Islands
Blood Vessels
Foregut
Head Mesenchyme
Notochord
Oral Pharynx
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Spinal Cord
Trunk Mesenchyme
section at level of middle of heart tube
19-20
stage 20
stage 20
Eye
Forebrain
Foregut
Hindbrain
Midbrain
Nasal Placode/Nerve
Oral Pharynx
Sclerotome
Spinal Cord
Spinal Ganglia and Nerves
 

Mouse

EmageMGI:1891835
MGI GXDMGI:1891835

Frog

Xenbase488661

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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