GEISHA - A Chicken Embryo Gene Expression Database
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_

CDH1
cadherin 1

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolCDH1
Official Full Namecadherin 1
CGNC ID377
also known ascadherin-1, cadherin-1|E-cadherin|L-CAM|cadherin 1, type 1, E-cadherin (epithelial)|epithelial cadherin|liver cell adhesion molecule|liver cell adhesion protein, Epithelial-cadherin precursor, E-cadherin, Cadherin-1, Liver cell adhesion molecule (L-CAM)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001039258
PolypeptideNP_001034347
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.2982
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human999ENSG00000039068MIM:114480MIM:192090
Mouse12550ENSMUSG00000000303All phenotypic alleles (15):Targeted, knock-out(3) Targeted, other(12) MGI:88354
Xenopus779546, 10033761812531593
Zebrafish100330081, 791686, 100329859, 114424, 567602ENSDARG00000092450, ENSDARG00000024371, ENSDARG00000035796ZDB-GENE-110406-4, ZDB-GENE-081104-9, ZDB-GENE-010606-1, ZDB-GENE-110407-4ZFIN:ZDB-GENE-110406-4, ZFIN:ZDB-GENE-081104-9, ZFIN:ZDB-GENE-010606-1, ZFIN:ZDB-GENE-110407-4
Gene Ontology
Molecular Functioncalcium ion binding, protein binding
Biological Processhomophilic cell adhesion
Cellular Componentintegral component of membrane, plasma membrane
Links to other databases
Entrez Gene415860
Ensembl GeneENSGALG00000000608
KEGGgga:415860

Entry 1

GEISHA IdCDH1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATGGCGTCGTCTCAACAAAACG
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGGGGTCAATGGTGAACATCTGGGcDNA Template Length1108
Complete cDNA Template Probeshow
TTTTTTAAAAAATTTTTGGGGCCCAAATTAGGGGTTTTTTCAAAAACGGCCACTGACGCCTTATGGGAAGGAAGATCAG
CTTCACCATTACGCCACAGGATGCCATGGGCAAGAAGGCACTCAGCCCCGGGGTGACTGTGGGCAGGCACAGGCACCGC
CGCCACCACCACAACCACCACCTGCAGGACACGACGCCGGCTGTGCTGACCTTCCCCAAGCACGACCCCGGCTTCCTCC
GGAGGCAGAAGAGGGATTGGGTCATCCCCCCCATCAGCTGCCTCGAGAACCACCGGGGGCCCTACCCCATGAGGCTGGT
GCAGATCAAATCCAACAAGGACAAGGAGTCCAAGGTGTACTACAGCATCACGGGGCAGGGCGCGGACAGCCCGCCCGTG
GGCATCTTCATCATCGAGCGCGAGACGGGGTGGCTGGAGGTGACGGAGCAGCTGGACCGGGAGAAGATCGATCGCTACA
CCCTCTTATCCCACGCCGTGTCGGCCAGCGGGCAGCCCGTGGAGGACCCCATGGAGATCATCATCACGGTGATGGACCA
GAACGACAACAAGCCCGTGTTCATCAAGGAGGTCTTCGTCGGCTACATCGAGGAGAACGCGAAGCCAGGCACCTCCGTG
ATGACCGTGAACGCCACGGATGCGGACGATGCGGTGAACACGGACAACGGCATCGTCAGCTACTCCATCGTCAGCCAGC
AGCCGCCCCGCCCGCACCCCCAGATGTTCACCATTGACCCGGCCAAGGGCATCATCAGCGTGCTGGGCACGGGGCTGGA
CCGGGAGACCACTCCCAACTACACACTGATCGTCCAGGCCACGGACCAGGAGGGCAAGGGTCTGTCCAACACCGCCACG
GCCATCATTGAGGTCACGGATGCCAACGACAACATTCCATCTTCAACCCCACCATGTACGAAGGTGTGGTGGAAAAATA
AGCCAGGTACCAGAGGTGGCCAGGCTGACCTGTGACCGGAACCAGGACCGCATCCAGGCTGCCCAGGCCCTGGCAGGCC
CGTTTACCCACATCAAGAGTGGGAACCCTGGATTGGTGCCTTCAACTATTACTGACCCCGCCCTTTTTGGGTAATTTTT
TTAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 6
Area Opaca
Area Pellucida
Early Mesoderm
Ectoderm
Epiblast
Border of neural and non neural ectoderm
Ectoderm-Neural Plate Boundary
7-12
stage 7
stage 10
stage 12
Ectoderm
Widespread Expression
Sections pending.
13-18
stage 13
stage 14
stage 15
Ear/Otic Placode
Ectoderm
Intermediate Mesoderm
Tail
Widespread Expression
Sections pending.
19-24
stage 20
stage 22
Ectoderm
Nephric Tubules
Renal
Sections pending.
25
stage 25
stage 25
Ectoderm
Gut
Renal
 

Entry 2

GEISHA IdE-cadherin.Ohta.2007Data SourcePublication
Complete cDNA Template Probeshow
AGCTCCGTGCGCAGCGGTACCCGTACCGGTACCGGCCCGGTCCCTGAGCCATGGGCCGGCGGTGGGGTTCCCCCGCCCT
GCAGCGCTTCCCCGTGTTGGTGCTGCTGCTGCTGCTCCAGGTGTGCGGCCGGCGGTGCGACGAGGCAGCCCCCTGCCAG
CCCGGCTTTGCTGCAGAGACCTTCAGCTTCAGTGTGCCCCAGGACAGCGTGGCGGCGGGCAGGGAGCTGGGACGAGTGA
GCTTTGCAGCCTGCAGCGGGCGGCCGTGGGCCGTGTATGTCCCGACTGACACACGCTTCAAGGTGAACGGGGATGGCGT
CGTCTCAACAAAACGGCCACTGACGCTCTATGGGAGGAAGATCAGCTTCACCATCTACGCACAGGATGCCATGGGCAAG
AGGCACTCAGCCCGGGTGACTGTGGGCAGGCACAGGCACCGCCGCCACCACCACAACCACCACCTGCAGGACACGACGC
CGGCTGTGCTGACCTTCCCCAAGCACGACCCCGGCTTCCTCCGGAGGCAGAAGAGGGATTGGGTCATCCCCCCCATCAG
CTGCCTCGAGAACCACCGGGGGCCCTACCCCATGAGGCTGGTGCAGATCAAATCCAACAAGGACAAGGAGTCCAAGGTG
TACTACAGCATCACGGGGCAGGGCGCGGACAGCCCGCCCGTGGGCATCTTCATCATCGAGCGCGAGACGGGGTGGCTGG
AGGTGACGGAGCAGCTGGACCGGGAGAAGATCGATCGCTACACCCTCTTATCCCACGCCGTGTCGGCCAGCGGGCAGCC
CGTGGAGGACCCCATGGAGATCATCATCACGGTGATGGACCAGAACGACAACAAGCCCGTGTTCATCAAGGAGGTCTTC
GTCGGCTACATCGAGGAGAACGCGAAGCCAGGCACCTCCGTGATGACCGTGAACGCCACGGATGCGGACGATGCGGTGA
ACACGGACAACGGCATCGTCAGCTACTCCATCGTCAGCCAGCAGCCGCCCCGCCCGCACCCCCAGATGTTCACCATTGA
CCCGGCCAAGGGCATCATCAGCGTGCTGGGCACGGGGCTGGACCGGGAGACCACTCCCAACTACACACTGATCGTCCAG
GCCACGGACCAGGAGGGCAAGGGTCTGTCCAACACCGCCACGGCCATCATTGAGGTCACGGATGCCAACGACAACATTC
CCATCTTCAACCCCACCATGTACGAAGGTGTGGTGGAAGAGAATAAGCCAGGTACAGAGGTGGCCAGGCTGACTGTGAC
GGACCAGGACGCACCAGGCTCCCCAGCCTGGCAAGCCGTTTACCACATCAAGAGTGGGAACCTGGATGGTGCCTTCAGC
ATTATTACTGACCCCAGCACCAACAACGGAATCCTGAAGACAGCCAAGGGCCTGGATTATGAGACCAAGAGCCGCTACG
ACCTGGTGGTGACGGTGGAGAACAAAGTGCCCCTGTCCGTGCCCATCACACTCTCCACCGCCAGCGTCCTGGTGACCGT
CCTGGACGTGAATGAGCCCCCTGTCTTCGTGCCCCCTATCAAGAGGGTAGGGGTACCAGAGGACCTACCAGTGGGGCAG
CAGGTTACATCCTACACGGCCCAAGACCCCGACAGGGACATGAGGCAGAAGATCACGTACCGCATGGGCAGCGACCCAG
CAGGCTGGCTGTACATTCACCCCGAGAATGGCATTGTCACGGCCACCCAGCCACTGGACCGCGAGTCGGTGCACGCCAT
CAACAGTACATACAAGGCCATCATCCTGGCTGTGGACAATGGGATACCGGATACCACCGGTACGGGGACGCTGCTGCTG
CTCCTCCAGGATGTGAATGACAACGGGCCCACCCCAGAGCCCCGGTCCTTCGAGATCTGCAGCCGGCAGCCTGAGAAGC
AGATACTGAGCATTGTGGACAAGGACCTGCCCCCACATACCTACCCCTTCAAGGCAGCACTGGAGCATGGTTCCAGCAA
CAACTGGACTGTTGAGATAAGGGGCCAAGATGAGCTGGCCATGGGCCTGAAAAAGGAGCTGGAGCCGGGCGAGTACAAT
ATCTTTGTGAAGCTGACGGACAGCCAGGGCAAGGCACAGGTGACGCAGGTCAAAGCCCAGGTGTGTGAGTGTGAAGGGA
CAGCCAAGAACTGCGAGCGGAGGTCGTACATCGTCGGTGGGCTGGGTGTCCCCGCCATCCTGGGCATCCTGGGGGGAAT
CCTGGCCCTGCTGATCCTGCTGCTGCTGCTGCTGCTCTTTGCCCGGCGACGCAAAGTGGAGAAGGAGCCGTTGCTGCCG
CCCGAGGATGACATGCGGGACAACGTCTACAACTACGACGAGGAGGGCGGCGGCGAGGAGGACCAGGACTACGACCTGA
GCCAGCTGCACCGCGGCCTGGACGCCCGCCCCGAGGTGATCCGCAATGATGTGGCCCCCCCGCTGATGGCCGCCCCCCA
GTACCGGCCCCGGCCCGCCAACCCCGATGAGATCGGGAACTTCATCGACGAGAACCTGAAGGCAGCTGACACGGACCCC
ACGGCCCCCCCCTACGACTCGCTGCTGGTGTTCGACTACGAGGGCGGCGGCTCGGAGGCCACCTCGCTCAGCTCCCTCA
ACTCCTCCGCCTCCGACCAGGACCAGGACTACGACTACCTCAACGAGTGGGGCAACCGCTTCAAGAAGCTGGCGGAGCT
CTATGGCGGCGGGGAGGATGATGAATAGGCAGCCTTCGTCCCCTTGGCTGGCCCGCCACGTGGCTCTTGCCATTTCACC
CCCTCGGACATGCACTGGGTTTGCAGCTAAAGCCCCCTCCAACAGCGTTGGATCCACCACTCGCATCCCTCCCCTTCGG
TGCAGGGAAAGCTCAGGGTCACCGGGGCTGGAGGCTTTTGGGGAGCCCACGCTTTTCCTGCCCCCTCAGCCCCACACAG
GGCACAGTCCCATTCGGGCTCCTTGGGAACAGGCTGGAGGCGCGGTGCTCCTGGGTCAGCTCCCAGTGCCCCAATCCCA
CAGCCCCCACAGCACGGCCGGCGCTCAGCATCTCTCCCCCTGCAAGGAAAGAGGCCCCCACCGCCTCTCTCCCTTTGCT
ACAGAGGAAGGGGTTTCTCCGGCACCCTCCATAATACCTCGTGCTCCCAGCCCCGCCATCGGCGCCACGCTCAGGGTCT
GGGATGGCCTTTGTGTGGAGCTGCTCGTGCGTGTGCAACACGGGTGGGCGATCGCTCCCGCACACCAACGACGTGCCAT
TCCCTCTGCATGACACACCAGAGAATTATATTTGATACAGTACTCACGGGCAGATTTCTATTTTTTGTATAACAGGTGA
CGATGTTATTTCCAGCTGCGTTGTTTGTAGTTATCGTTCTGTTAATGAGAGGTGCTTCCTGAAATCAAGTGGCTTTACT
TAAACTCCGAACTCCGTGTCTAGCTGTTGTTTTGTATTGTTAATATGGGAAAAGGGCCTGATGCACGCTGGAAGGCCGG
CGATTGCCTAAGTGTTAATTGATGGAATGATTTTTATATGAAATCAAAAGAATAAATTGTAAGAAAACC
CitationOhta S, Suzuki K, Tachibana K, Tanaka H, Yamada G. Cessation of gastrulation is mediated by suppression of epithelial-mesenchymal transition at the ventral ectodermal ridge. Development. 2007 Dec;134(24):4315-24. Epub 2007 Nov 14.
CopyrightPublished by The Company of Biologists 2007. This material is protected by a copyright retained by the authors. Permission granted by Dr. Yamada.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_001039258).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 24
Tail
Ventral Ectodermal Layer

Entry 3

GEISHA IdCDH1.Hardy.2011Data SourcePublication
Complete cDNA Template Probeshow
TTTTTTAAAAAATTTTTGGGGCCCAAATTAGGGGTTTTTTCAAAAACGGCCACTGACGCCTTATGGGAAGGAAGATCAG
CTTCACCATTACGCCACAGGATGCCATGGGCAAGAAGGCACTCAGCCCCGGGGTGACTGTGGGCAGGCACAGGCACCGC
CGCCACCACCACAACCACCACCTGCAGGACACGACGCCGGCTGTGCTGACCTTCCCCAAGCACGACCCCGGCTTCCTCC
GGAGGCAGAAGAGGGATTGGGTCATCCCCCCCATCAGCTGCCTCGAGAACCACCGGGGGCCCTACCCCATGAGGCTGGT
GCAGATCAAATCCAACAAGGACAAGGAGTCCAAGGTGTACTACAGCATCACGGGGCAGGGCGCGGACAGCCCGCCCGTG
GGCATCTTCATCATCGAGCGCGAGACGGGGTGGCTGGAGGTGACGGAGCAGCTGGACCGGGAGAAGATCGATCGCTACA
CCCTCTTATCCCACGCCGTGTCGGCCAGCGGGCAGCCCGTGGAGGACCCCATGGAGATCATCATCACGGTGATGGACCA
GAACGACAACAAGCCCGTGTTCATCAAGGAGGTCTTCGTCGGCTACATCGAGGAGAACGCGAAGCCAGGCACCTCCGTG
ATGACCGTGAACGCCACGGATGCGGACGATGCGGTGAACACGGACAACGGCATCGTCAGCTACTCCATCGTCAGCCAGC
AGCCGCCCCGCCCGCACCCCCAGATGTTCACCATTGACCCGGCCAAGGGCATCATCAGCGTGCTGGGCACGGGGCTGGA
CCGGGAGACCACTCCCAACTACACACTGATCGTCCAGGCCACGGACCAGGAGGGCAAGGGTCTGTCCAACACCGCCACG
GCCATCATTGAGGTCACGGATGCCAACGACAACATTCCATCTTCAACCCCACCATGTACGAAGGTGTGGTGGAAAAATA
AGCCAGGTACCAGAGGTGGCCAGGCTGACCTGTGACCGGAACCAGGACCGCATCCAGGCTGCCCAGGCCCTGGCAGGCC
CGTTTACCCACATCAAGAGTGGGAACCCTGGATTGGTGCCTTCAACTATTACTGACCCCGCCCTTTTTGGGTAATTTTT
TTAAAAA
CitationHardy KM, Yatskievych TA, Konieczka J, Bobbs AS, Antin PB. FGF signalling through RAS/MAPK and PI3K pathways regulates cell movement and gene expression in the chicken primitive streak without affecting E-cadherin expression. BMC Dev Biol. 2011 Mar 21;11:20.
Copyright© 2011 Hardy et al; licensee BioMed Central Ltd.
Comments1120 nt probe generated by pcr. Transcribed with T3 polymerase, sequenced at UAz
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4
stage 4
stage 4
Epiblast
Primitive Streak
 

Entry 4

GEISHA IdE-CADHERIN.Dady.2012Data SourcePublication
Complete cDNA Template Probeshow
AGCTCCGTGCGCAGCGGTACCCGTACCGGTACCGGCCCGGTCCCTGAGCCATGGGCCGGCGGTGGGGTTCCCCCGCCCT
GCAGCGCTTCCCCGTGTTGGTGCTGCTGCTGCTGCTCCAGGTGTGCGGCCGGCGGTGCGACGAGGCAGCCCCCTGCCAG
CCCGGCTTTGCTGCAGAGACCTTCAGCTTCAGTGTGCCCCAGGACAGCGTGGCGGCGGGCAGGGAGCTGGGACGAGTGA
GCTTTGCAGCCTGCAGCGGGCGGCCGTGGGCCGTGTATGTCCCGACTGACACACGCTTCAAGGTGAACGGGGATGGCGT
CGTCTCAACAAAACGGCCACTGACGCTCTATGGGAGGAAGATCAGCTTCACCATCTACGCACAGGATGCCATGGGCAAG
AGGCACTCAGCCCGGGTGACTGTGGGCAGGCACAGGCACCGCCGCCACCACCACAACCACCACCTGCAGGACACGACGC
CGGCTGTGCTGACCTTCCCCAAGCACGACCCCGGCTTCCTCCGGAGGCAGAAGAGGGATTGGGTCATCCCCCCCATCAG
CTGCCTCGAGAACCACCGGGGGCCCTACCCCATGAGGCTGGTGCAGATCAAATCCAACAAGGACAAGGAGTCCAAGGTG
TACTACAGCATCACGGGGCAGGGCGCGGACAGCCCGCCCGTGGGCATCTTCATCATCGAGCGCGAGACGGGGTGGCTGG
AGGTGACGGAGCAGCTGGACCGGGAGAAGATCGATCGCTACACCCTCTTATCCCACGCCGTGTCGGCCAGCGGGCAGCC
CGTGGAGGACCCCATGGAGATCATCATCACGGTGATGGACCAGAACGACAACAAGCCCGTGTTCATCAAGGAGGTCTTC
GTCGGCTACATCGAGGAGAACGCGAAGCCAGGCACCTCCGTGATGACCGTGAACGCCACGGATGCGGACGATGCGGTGA
ACACGGACAACGGCATCGTCAGCTACTCCATCGTCAGCCAGCAGCCGCCCCGCCCGCACCCCCAGATGTTCACCATTGA
CCCGGCCAAGGGCATCATCAGCGTGCTGGGCACGGGGCTGGACCGGGAGACCACTCCCAACTACACACTGATCGTCCAG
GCCACGGACCAGGAGGGCAAGGGTCTGTCCAACACCGCCACGGCCATCATTGAGGTCACGGATGCCAACGACAACATTC
CCATCTTCAACCCCACCATGTACGAAGGTGTGGTGGAAGAGAATAAGCCAGGTACAGAGGTGGCCAGGCTGACTGTGAC
GGACCAGGACGCACCAGGCTCCCCAGCCTGGCAAGCCGTTTACCACATCAAGAGTGGGAACCTGGATGGTGCCTTCAGC
ATTATTACTGACCCCAGCACCAACAACGGAATCCTGAAGACAGCCAAGGGCCTGGATTATGAGACCAAGAGCCGCTACG
ACCTGGTGGTGACGGTGGAGAACAAAGTGCCCCTGTCCGTGCCCATCACACTCTCCACCGCCAGCGTCCTGGTGACCGT
CCTGGACGTGAATGAGCCCCCTGTCTTCGTGCCCCCTATCAAGAGGGTAGGGGTACCAGAGGACCTACCAGTGGGGCAG
CAGGTTACATCCTACACGGCCCAAGACCCCGACAGGGACATGAGGCAGAAGATCACGTACCGCATGGGCAGCGACCCAG
CAGGCTGGCTGTACATTCACCCCGAGAATGGCATTGTCACGGCCACCCAGCCACTGGACCGCGAGTCGGTGCACGCCAT
CAACAGTACATACAAGGCCATCATCCTGGCTGTGGACAATGGGATACCGGATACCACCGGTACGGGGACGCTGCTGCTG
CTCCTCCAGGATGTGAATGACAACGGGCCCACCCCAGAGCCCCGGTCCTTCGAGATCTGCAGCCGGCAGCCTGAGAAGC
AGATACTGAGCATTGTGGACAAGGACCTGCCCCCACATACCTACCCCTTCAAGGCAGCACTGGAGCATGGTTCCAGCAA
CAACTGGACTGTTGAGATAAGGGGCCAAGATGAGCTGGCCATGGGCCTGAAAAAGGAGCTGGAGCCGGGCGAGTACAAT
ATCTTTGTGAAGCTGACGGACAGCCAGGGCAAGGCACAGGTGACGCAGGTCAAAGCCCAGGTGTGTGAGTGTGAAGGGA
CAGCCAAGAACTGCGAGCGGAGGTCGTACATCGTCGGTGGGCTGGGTGTCCCCGCCATCCTGGGCATCCTGGGGGGAAT
CCTGGCCCTGCTGATCCTGCTGCTGCTGCTGCTGCTCTTTGCCCGGCGACGCAAAGTGGAGAAGGAGCCGTTGCTGCCG
CCCGAGGATGACATGCGGGACAACGTCTACAACTACGACGAGGAGGGCGGCGGCGAGGAGGACCAGGACTACGACCTGA
GCCAGCTGCACCGCGGCCTGGACGCCCGCCCCGAGGTGATCCGCAATGATGTGGCCCCCCCGCTGATGGCCGCCCCCCA
GTACCGGCCCCGGCCCGCCAACCCCGATGAGATCGGGAACTTCATCGACGAGAACCTGAAGGCAGCTGACACGGACCCC
ACGGCCCCCCCCTACGACTCGCTGCTGGTGTTCGACTACGAGGGCGGCGGCTCGGAGGCCACCTCGCTCAGCTCCCTCA
ACTCCTCCGCCTCCGACCAGGACCAGGACTACGACTACCTCAACGAGTGGGGCAACCGCTTCAAGAAGCTGGCGGAGCT
CTATGGCGGCGGGGAGGATGATGAATAGGCAGCCTTCGTCCCCTTGGCTGGCCCGCCACGTGGCTCTTGCCATTTCACC
CCCTCGGACATGCACTGGGTTTGCAGCTAAAGCCCCCTCCAACAGCGTTGGATCCACCACTCGCATCCCTCCCCTTCGG
TGCAGGGAAAGCTCAGGGTCACCGGGGCTGGAGGCTTTTGGGGAGCCCACGCTTTTCCTGCCCCCTCAGCCCCACACAG
GGCACAGTCCCATTCGGGCTCCTTGGGAACAGGCTGGAGGCGCGGTGCTCCTGGGTCAGCTCCCAGTGCCCCAATCCCA
CAGCCCCCACAGCACGGCCGGCGCTCAGCATCTCTCCCCCTGCAAGGAAAGAGGCCCCCACCGCCTCTCTCCCTTTGCT
ACAGAGGAAGGGGTTTCTCCGGCACCCTCCATAATACCTCGTGCTCCCAGCCCCGCCATCGGCGCCACGCTCAGGGTCT
GGGATGGCCTTTGTGTGGAGCTGCTCGTGCGTGTGCAACACGGGTGGGCGATCGCTCCCGCACACCAACGACGTGCCAT
TCCCTCTGCATGACACACCAGAGAATTATATTTGATACAGTACTCACGGGCAGATTTCTATTTTTTGTATAACAGGTGA
CGATGTTATTTCCAGCTGCGTTGTTTGTAGTTATCGTTCTGTTAATGAGAGGTGCTTCCTGAAATCAAGTGGCTTTACT
TAAACTCCGAACTCCGTGTCTAGCTGTTGTTTTGTATTGTTAATATGGGAAAAGGGCCTGATGCACGCTGGAAGGCCGG
CGATTGCCTAAGTGTTAATTGATGGAATGATTTTTATATGAAATCAAAAGAATAAATTGTAAGAAAACC
CitationDady A, Blavet C, Duband JL Timing and kinetics of E- to N-cadherin switch during neurulation in the avian embryo DEVELOPMENTAL DYNAMICS. Volume 241, Issue 8, August 2012, Pages: 1333–1349.
CopyrightCopyright © 2012 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (Acc. # NM_001039258.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
Hensen's Node
Neural Plate/Tube
Primitive Streak
 
7-12
stage 7
stage 7
stage 8
stage 8
stage 8
stage 8
stage 8
stage 9
stage 10
stage 10
stage 10
stage 11
stage 11
Ectoderm
Hensen's Node
Hindbrain
Mesencephalon
Midbrain
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
Somites
cranial mesoderm
neural ectoderm,
13-14
stage 14
stage 14
stage 14
stage 14
stage 14
stage 14
Ectoderm
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
21 somite embryo
22 somite embryo
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.2982

Mouse

EmageMGI:88354
EurexpressMGI:88354
MGI GXDMGI:88354

Frog

Xenbase12531593

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-110406-4, ZDB-GENE-081104-9, ZDB-GENE-010606-1, ZDB-GENE-110407-4
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