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A chicken embryo gene expression database

	Anatomical Location
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	Gene Name
	GEISHA ID
	Multiple Parameters

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CHAT
choline O-acetyltransferase

The human orthologue of this gene is associated
with the following human disease:

Myasthenic syndrome, congenital, associated with episodic apnea

Gene

Official Symbol	CHAT
Official Full Name	choline O-acetyltransferase
CGNC ID	1633
also known as	choline O-acetyltransferase\|CHOACTase\|choline acetylase\|choline acetyltransferase
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_204610
Polypeptide	NP_989941

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	42249			FBgn0000303
Human	1103	ENSG00000070748	MIM:254210	MIM:118490
Mouse	12647	ENSMUSG00000021919	All phenotypic alleles (10):Targeted, knock-out(3) Targeted, other(7)	MGI:88392
Xenopus	100485221			984173
Zebrafish	100170938	ENSDARG00000015854	ZDB-GENE-080102-2	ZFIN:ZDB-GENE-080102-2

Gene Ontology

Molecular Function	choline O-acetyltransferase activity
Biological Process	neurotransmitter biosynthetic process
Cellular Component

Links to other databases

Entrez Gene	395314
Ensembl Gene	ENSGALG00000002289
KEGG	gga:395314

GEISHA Id	CHAT.Sanders.2002	Data Source	Publication
Complete cDNA Template Probe	show ATGCCTGATCTAGAAAAAGACATGCAGAAGAAGGAGAAAGATTCACGCAGTAAAGATGAGCCAGCAGTACCAAAACTTC CAGTCCCACCACTGCAACAGACCTTACAGATGTACCTTCAGTGCATGAAACACTTGGTGCCAGAGGAGCAATTTAGAAA GACCAAGAGCATCGTGGAACAGTTTGGAGTTGCAGGAGGCCTTGGGGAATCCTTGCAGCTAATCCTCGAGGAAAGAAGG GAAGAGACCACAAACTGGGTGTTTAACTATTGGCTGGATGACATGTACCTCAACAACCGTTTGGCTCTTCCAGTCAACT CCAGCCCAGCAATTATCTTTGCTCGTCAAAATTTCAAGGATGTAAATGACCAGCTAAGGTTTGCTGCCAATCTTATTTC CGGCGTGCAAGACTATAAAGCTTTACTAGACAGCCATGCTTTACCTGTTGATTTTGCTCGTGGACAGCTGTCTGGTCAG CCTCTCTGTATGAAGCAATACTATGGACTCTTTTCTTCCTATCGTCTTCCAGGACATACCAAAGACACGCTTGTGGCCC AGAAAAGCTGTGTAATGCCAGAACCAGAGCACATCATTGTTGCTTGTAACAATCAGCTTTTTGTTTTGGATGTTGGCAT TAATTTCCGTCGTCTCAGTGAGGGAGATCTTTTCACTCAGTTACGAAAGATAGCCAAAATGGCAGAGAATGAAGAGGAA ATGCTGCCTCCAATTGGCTTGCTGACGACTGATGGAAGAACAGAGTGGGCAGAGGCCAGGACAATCCTTATGAAAGATT CTACTAATCGCGACTCTCTTGACATGATTGAACGATGTATATGCCTGGTGTGCCTGGACGGTACAAGTGGGGTTGAACT CAATGATACAAACATGGCGTTGCAACTGCTACATGGAGGAGGCTACCATAAAAATGGTGCCAATCGTTGGTATGACAAA CCCATGCAGTTTGTGGTAGGAAGAGATGGAGTCTGCGGCACTGTGTGTGAACATTCCCCTTTCGACGGCATCGTACTGG TGCAGTGCACCGAACACCTGCTCAAGCACATGAAAGAAAGCTCCAAGAAATTACTCCGAGCCGATTCAGTAAGCGAGCT TCCTGCTCCACGGAGATTAAGATGGAAATGTTCCCCTGAAATTCAGGCGCACTTGGCATCCTCAGCAGAAAAACTCCAG AGGATAGTAAAAAATCTGGACTTTATTGCCTACAAGTTTGTGAACTATGGAAAGGAATTTATTAAGAAACAGAAGACCA GCCCAGATGCCTACATTCAAGTAGCACTGCAGCTTGCATTTTACAGGTGCCACAGGAGACTTGTCCCTACCTATGAAAG TGCTTCCATACGCCGATTTGATGAGGGCAGAGTTGACAACATTAGGTCTGCTACGGCGGAAGCGTTTGCTTTTGTGAAA GCAATGATTGATGACAAGCCAGCTCTGTCGGATTCTGAGAAGATGCAGAGATTTAAGGACGCAATTGCAGCTCAAACTA ATTACACTATTTTGGCTATTACTGGAATGGCAATAGACAATCACCTACTAGGGCTGAGAGAGGTGGCACGAGAACACTT CAAGGAACTGCCGGAGATCTTTACAGATGAGACCTATTTGACAAGCAATAGATTCATCCTCTCAACCAGCCAGGTTCCA ACACCAATGGAAATGTTCTGCTGCTATGGGCCCGTGGTGCCCAACGGTTATGGGGCATGTTATAATCCTCAGCCAGAAC ACATATTATTCTGCATTTCAAGCTTTAAAGACTGTAAAGAAACGTCTTCAGACATGCTTGCCAAAGCCGTGGAAGAAAG TCTCCTAGAAATCAGAGACCTGTGCAACAAATGCAGCTCTTCTACAGCAAAGTCACTTGCTAAACAAGAGGAAGCCACA CAGTTGCGGAGTGACCGCAAACTCTGAGAGGCTCTGGGAATTATTACCCTGAATCCACCGTAAGAAGTAAAAAACGACA TAGTTGTTCAAAGGCAAGATAGTGCTAGTGATATATTAGCGTAGAACAAAAATGCCATGTCTTTTACACTGTTGCTAAC ATTTATAGATGTGAAATCTTACATTTCATGCTTGAGGATCAGCAAGAAGGTTTGGTCTCACTGACTGCAATGAAAAAGG CAGGAATACGTGTACGTATTGTAGTATCATTTCTAACCATAATTGACTTATGCCTCTTTATTTTCTAAATAAACCTGAA ATTTGTAAAAAAAAAAAAAAAAA
Citation	Sanders TA, Lumsden A, Ragsdale CW. Arcuate plan of chick midbrain development. J Neurosci. 2002 Dec 15;22(24):10742-50.
Copyright	Copyright © 2002-2011 by the Society for Neuroscience
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (NM_204610).