GEISHA - A Chicken Embryo Gene Expression Database
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CLSTN1
calsyntenin 1

Gene
Official SymbolCLSTN1
Official Full Namecalsyntenin 1
CGNC ID1874
also known asCALSYNTENIN-1, calsyntenin-1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_001197050
PolypeptideNP_001183979
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly43824FBgn0039928
Human22883ENSG00000171603MIM:611321
Mouse65945ENSMUSG00000039953All phenotypic alleles (3):Targeted, other(2) Gene trapped(1) MGI:1929895
Xenopus1001456686037891
Zebrafish777737ENSDARG00000031720ZDB-GENE-040426-1064ZFIN:ZDB-GENE-040426-1064
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395372
Ensembl GeneENSGALG00000002606
KEGGgga:395372
GEISHA IdCLSTN1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTCTTCCGAGGCAATCTGGCAG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGAGCGTGTTCAATGGGGTTAGCcDNA Template Length867
Forward cDNA Template Probeshow
GGAAACATTCACCTCTACTTTAAACTCATTGCTGGACATAGCCGCCCATTAAGCTCAGAACAAACCAATTTGAACTTCC
TGGTCAAAAAGAGAAACGGTGTGCCAGTTTCTGTAGCGTATCAAATGCAAGACTTCCTCATAGCTAGCCATAGTATCAA
CTCCTGTGATGATCATGCCAAGGTTGGAACTACTCATCTCAATGCCCTTCTGCTGTAATCGTGTCATGTCAACCTCCAG
GCTTTCTTGATCCTGATTTAGTTCTTCTCCCACCACTGTCACTTCACACGTATCCAGGTTATGCATGATTTCTTCAGAA
ACCAAAGACTCTTGTACTGTAGGATCTTCATCCCCATCTCCATCTGGCTCCACCTCCCGTGTAATGGTGCTTATTATAC
GGAGCTCAGGGAAGAGGGAAATACCCTCAGAACTCTCAAACTCTGAAGCAGATCTGGCAAAATGGTTGATGCCACTCAG
ACTGATTTTTGGTTCCTCTGGTTGCAAGACCATTACATATCCCTCCACAGAAGGAATAGAGACACAGGCCTCTTCATTG
AAACACTTGACAGTACTGGTGATTTTAAGCCTCCGGATTCCAGGTGTTGGGAATTGGCGAGAATTCAGATAGGAAATGT
GCTGCATGGCCTTATCAACTCTGTCAATATCATCCCCTTCTATGGTCACTGCTGACTGACTAGGGTTCATGTGGATCTT
CACGCCTTTGCCAACACCATCAGCAATTTGCAAATCCAGCCCCTCCTTGCAGGTATACAGGCAATCTATCACTTTCTTG
TTTTCCAGTTTACCAGAACGAATCATCAAACCTGCCAGATTGCC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
stage 4
stage 6
Epiblast
Extraembryonic Mesoderm
Lateral Plate Mesoderm
Notochord
Primitive Streak
 
7-12
stage 8
stage 8
stage 8
stage 9
stage 9
stage 9
stage 9
stage 9
stage 11
stage 11
stage 11
stage 11
stage 11
stage 11
stage 11
stage 11
Area Opaca
Dermomyotome
Ear/Otic Placode
Ectoderm
Endoderm
Extraembryonic Mesoderm
Eye
Forebrain
Foregut
Head Mesenchyme
Head Process
Heart
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Primitive Streak
Sinus Venosus
Somites
Splanchnic Mesoderm
Unilateral
13-18
stage 17
stage 18
Ectoderm
Eye
Forebrain
Hindbrain
Liver
Midbrain
Pharyngeal Arches and Clefts
Spinal Cord
 
19-24
stage 19
Eye
Liver
Notochord
Oral Pharynx
Pharyngeal Arches and Clefts
 
25-27
stage 25
stage 25
stage 25
stage 25
stage 27
Allantois
Eye
Forebrain
Foregut
Hindbrain
Mesonephros
Midbrain
Pharyngeal Arches and Clefts
Spinal Cord
Spinal Ganglia and Nerves
 

Mouse

Emage
MGI GXDMGI:1929895

Frog

Xenbase6037891

Fruit Fly

BDGPFBgn0039928

Zebra Finch

ZEBrACLSTN1

Zebrafish

ZFINZDB-GENE-040426-1064
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