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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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MEF2D
myocyte enhancer factor 2D

Gene

Official Symbol	MEF2D
Official Full Name	myocyte enhancer factor 2D
CGNC ID
also known as	myocyte-specific enhancer factor 2D\|MADS box transcription enhancer factor 2, polypeptide D (myocyte enhancer factor 2D)
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001031600
Polypeptide	NP_001026771
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.4344

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	431059
Ensembl Gene
KEGG	gga:431059

Entry 1

GEISHA Id	MEF2D.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	CTTCACCAAGCGTAAGTTCGGC
Reverse cDNA Template Primer	AATTAACCCTCACTAAAGGTTCAGGTCACCCCCAAGCATC	cDNA Template Length	573
Forward cDNA Template Probe	show AAAAGGATAAAGCCCGCATGGGTGGCCGCTGCGGCAGCCCTGGGGACACGTATTCCTCTGCAGTGTTGGCTGCTGTGGG GAGAGGAGCCGGGGGTCGGTCAGCGACGAGGTCACCAAGGATTGGGTCACCAACGAACTGCCCGGGCTGCTGAACTGCA GTGTGTTCTGGTTGGTCACGGGAACCGTCACTGGCATGGCAAAGTTTGGCGTGGGCACTGCGGAACCGTATCGCTTGAA CAGGATATCCAGATCCTCGCTGCCTTTACGGTATTTATCCTCCATCAAGGGGCTCTGGTCTATCGAGTCATCTCCGTCG GGTTCCGGGCTGTCACAGCCATTAAAACCTTTCTTTCTTAACGTCTCAATGATGTCCGCATTGGTCCGGCTCTCATGGG GCTCGTTGTACTCAGTGTACTTAAGCAGCACCTTGTCCATGTCGGTGCTGGCATACTGGAACAGCTTGTTGGAGTGGTA GAAGATGATCAGGGCGATCTCGCAGTCGCACAACACGCTCAGCTCGTAGGCTTTCATCGTCAANCCNAACTTACACTAG ATAAATAAAGACGCCGAGCAGCGCATGTTGTGGGGCTACGCGATATCNCCGAATCTTTTTCACCACTCAA

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 5

stage 6

Extraembryonic Mesoderm
Lateral Plate Mesoderm

7-12

stage 8

stage 10

stage 11

stage 12

Blood Vessels
Extraembryonic Mesoderm
Heart
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Primitive Streak
Somites

13-18

stage 16

stage 17

Heart
Myotome
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites

19-24

stage 21

stage 23

Allantois
Ear/Otic Placode
Head Mesenchyme
Heart
Leg Mesenchyme
Limb Buds
Myotome
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Wing Mesenchyme

stage 25

Allantois
Head Mesenchyme
Heart
Leg Mesenchyme
Myotome
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Wing Mesenchyme

Entry 2

GEISHA Id	MEF2D.Anderson.2022	Data Source	Direct Submission
Complete cDNA Template Probe	show CCTGAACTCATCCTGCTCCAGGCCACAGGGAGGTCCCTGGGGGATGGGGGCTGCGCGTCTGCCTCCTTCAAGAGACCCC AGCAGAGTTAGAGGGGTTCCAGCCCAACCTGTTGCAGCGGGACAGATTGTAATGGAATGAATGTGGGCAGCTTAAGGCG AGCGAATAGGGGAAGTCCTCTGAAAATCCGGGTGGGAGTGAATGGTGATGGCTGTGGAGAGGCAGCACGGAGCCGACGC AGCCCCACATCCCTGCGCAGCGCTGCAGAGGCGTGCAGGCAGCAATCTCCTGCTGAAAACCTTTGAGAAGCCCCATTTG CCACCGTTTATCCATAGGCCGATTGAGTTCTGAATGTGAAATGTTGGCGTTCCTCTCCCATTGCGGCACGCAGTGGGGG ACCCACGCGGGCAGATTCTGTGCCGTGTACCCCAATCCTCCTCTCTCCGCCTCAAACCCTTCACGGTGTGCACCGGGCT TCTTGTCCACGCCGAGGTGACGTGGATCTGTCCCCACGTCCCAACTCCGTCCCTCTGTCCCAGCTCTGTCCCCGTGTCC ATCCAGGAAGCAGCCACACCGCAGCACCCGGCGGCCTGCGTGCATCGGACCCGCACGGCAGCTCTTTTGCACGGCTCGC TTGTGGAAATTAGGTGGGATTGACGATGTCTCGTCGCTCTCATTTTCCTTTTCTTTTTTCCTGACGTCCTGCAAGAAAA AATAACGCCGCAAACCGAACGTTTTCCGGCCCTCAAAGGAGCGGGANGGCGGGCAGTGCGGCGCTTGGGAGGGGCGACG GAACCATTTCTGCTCATTTGATTCAACGCCCTTGACTTCACATCTCAGAGAGCCAGAAAAAAAAAAAGGGAAAAAAAAT TC
Comments	Images and probe sequence provided by Claire Anderson.

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 5

stage 6

Early Mesoderm
Epiblast
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak

7-12

stage 8

stage 9

stage 11

stage 12

Atria
Dermomyotome
Ectoderm
Extraembryonic Blood Vessels
Head Mesenchyme
Heart
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Pharynx
Sclerotome
Somatic Mesoderm
Splanchnic Mesoderm
Ventricles
Widespread Expression

Entry 3

GEISHA Id	MEF2D.Trevers.2023	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show CCTGAACTCATCCTGCTCCAGGCCACAGGGAGGTCCCTGGGGGATGGGGGCTGCGCGTCTGCCTCCTTCAAGAGACCCC AGCAGAGTTAGAGGGGTTCCAGCCCAACCTGTTGCAGCGGGACAGATTGTAATGGAATGAATGTGGGCAGCTTAAGGCG AGCGAATAGGGGAAGTCCTCTGAAAATCCGGGTGGGAGTGAATGGTGATGGCTGTGGAGAGGCAGCACGGAGCCGACGC AGCCCCACATCCCTGCGCAGCGCTGCAGAGGCGTGCAGGCAGCAATCTCCTGCTGAAAACCTTTGAGAAGCCCCATTTG CCACCGTTTATCCATAGGCCGATTGAGTTCTGAATGTGAAATGTTGGCGTTCCTCTCCCATTGCGGCACGCAGTGGGGG ACCCACGCGGGCAGATTCTGTGCCGTGTACCCCAATCCTCCTCTCTCCGCCTCAAACCCTTCACGGTGTGCACCGGGCT TCTTGTCCACGCCGAGGTGACGTGGATCTGTCCCCACGTCCCAACTCCGTCCCTCTGTCCCAGCTCTGTCCCCGTGTCC ATCCAGGAAGCAGCCACACCGCAGCACCCGGCGGCCTGCGTGCATCGGACCCGCACGGCAGCTCTTTTGCACGGCTCGC TTGTGGAAATTAGGTGGGATTGACGATGTCTCGTCGCTCTCATTTTCCTTTTCTTTTTTCCTGACGTCCTGCAAGAAAA AATAACGCCGCAAACCGAACGTTTTCCGGCCCTCAAAGGAGCGGGANGGCGGGCAGTGCGGCGCTTGGGAGGGGCGACG GAACCATTTCTGCTCATTTGATTCAACGCCCTTGACTTCACATCTCAGAGAGCCAGAAAAAAAAAAAGGGAAAAAAAAT TC
Comments	The complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023.