GEISHA - A Chicken Embryo Gene Expression Database
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HMBOX1
homeobox containing 1

Gene
Official SymbolHMBOX1
Official Full Namehomeobox containing 1
CGNC ID12465
also known ashomeobox-containing protein 1, Homeobox-containing protein 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_001277716
PolypeptideNP_001264645
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human79618ENSG00000147421
Mouse219150ENSMUSG00000021972All phenotypic alleles (2):Targeted, other(2) MGI:2445066
Xenopus446787, 446988992372
Zebrafish571508, 100317353ENSDARG00000027082, ENSDARG00000018913ZDB-GENE-050913-89, ZDB-GENE-090908-4ZFIN:ZDB-GENE-050913-89, ZFIN:ZDB-GENE-090908-4
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene422024
Ensembl GeneENSGALG00000016633
KEGGgga:422024
GEISHA IdChEST981k7Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GCGGCGATCGACGGCTTTATAACGTCCCATCCCCATGTAAAGTATGCTCAGAACTTTTCCAGTAGTCCTGCTGGAAACC
ATGTCTCACTACACAGACGAACCAAGATTTACCATAGAGCAGATAGACCTGCTTCAGCGCCTGAGACGTACAGGAATGA
CCAGACATGAAATCCTCCATGCGCTGGAAACCTTGGATCGTCTTGATCAAGAGCATAGTGACAAATTTGGAAGAAGGTC
TAGCTATGGAGGTGGTTCCTACAGCAACAGTACCAACAACGTCCCAGCATCTTCCTCGACAGCCACAGCTTCAACACAG
ACCCAGCATTCTGGGATGTCCCCATCACCAAGCAACAGTTACGACACCTCCCCACAGCCTTGCACTACTAATCAGAATG
GGAGGGAGAGTAACGAGAGGTTGTCTGCATTCAATGGGAAGATGTCACCCACCCGCTACCCACTAGCAAACAGCTTGGC
TCAAAGGTCTTACAGTTTTGAAGCTTCTGAAGAAGACTTGGACATCGATGACAAAGTGGAGGAACTGATGAGGAGGGAC
AGCAGTGTGATAAAGGAGGAAATCAAAGCCTTCCTAGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAG
GTATCAGTCAGAGCCGGATCTCACATTGGCTTTTGCAGCAGGGGTCAGACTTGAGTGAACAAAAGAAAAGGGCATTTTA
CAGATGGTACCAGCTTGAGAAGACAAATCCTGGGGCCACGTTAAGCATGCGACCCGCTCCCATCCCAATAGAAGAGCCA
GAATGGAGACAGACGCCTCCCCCAGTCACAGCTACCTCTGGGACCTTCAGACTACGGCGAGGCAGTCGGTTCACGTGGA
GAAAGGAATGCCTGGCTGTGATGGAAAGTTACTTCAATGAGAATNCATATCCTGACGAGGGCAAGAGAGAAGAATTGCC
ACGCCCTGTATGCAGTTATACAAAAGCAGGGAAAAAGTATCAGATCTGGAGCGAGGTACCTCCCTAAAGTGTACAACTG
GTTTGCCAACGAAGAAAGGAAATCAGAGACGAGCAATATCGCGCAATCCTGGAAGCCATGGATAGATGTCAGAGCCGGG
GAGGTCATCAACAGCACCACGTGGATGGCATGACTACTCAAACGGGACCTGNCAATTTCCATTGGGAGGAGGAGG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 5
stage 5
Early Mesoderm
Epiblast
Extraembryonic Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak
 
7-12
stage 7
stage 8
stage 9
stage 10
stage 11
Extraembryonic
Extraembryonic Mesoderm
Heart Tube
Lateral Plate Mesoderm
Myocardium
Neural Plate/Tube
Primitive Streak
Sinus Venosus
Somites
Widespread Expression
 
13-18
stage 17
stage 17
Amnion
Atria
Cranial Ganglia
Endocardium
Outflow Tract
Pharyngeal Arches and Clefts
Sinus Venosus
Tail
 
19-23
stage 19
stage 19
stage 23
stage 23
Aorta
Cranial Ganglia
Diencephalon
Endocardium
Extraembryonic
Face Mesenchyme
Hindbrain
Limb Buds
Midbrain
Outflow Tract
Pharyngeal Arches and Clefts
Pineal Gland
Sclerotome
Sinus Venosus
Splanchnic Mesoderm
Surface Ectoderm
Tail
Telencephalon
 

Mouse

EmageMGI:2445066
MGI GXDMGI:2445066

Frog

Xenbase992372

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-050913-89, ZDB-GENE-090908-4
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