GEISHA - A Chicken Embryo Gene Expression Database
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RBP3
retinol binding protein 3

Gene
Official SymbolRBP3
Official Full Nameretinol binding protein 3
CGNC ID4472
also known asretinol-binding protein 3|interphotoreceptor retinoid-binding protein|retinol binding protein 3, interstitial, IRBP, retinol binding protein 3, interstitial
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001024575
PolypeptideNP_001019746
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.297
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human5949ENSG00000265203MIM:180290
Mouse19661ENSMUSG00000041534All phenotypic alleles (1):Targeted, knock-out(1) MGI:97878
Xenopus100498171, 3986161008798
Zebrafish794630, 30735ENSDARG00000096519, ENSDARG00000059163ZDB-GENE-070301-4, ZDB-GENE-990415-132ZFIN:ZDB-GENE-070301-4, ZFIN:ZDB-GENE-990415-132
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395553
Ensembl GeneENSGALG00000005978
KEGGgga:395553

Entry 1

GEISHA IdIRBP.Bradford.2005Data SourcePublication
Complete cDNA Template Probeshow
GACATGAGGTTTAATATCGGAGGTTACACCAATTGGATACCAATCTTATGCTCATATTTCTTCGATGCCGGACATCAAG
TTCTACTGGACAAAGTTTATGACAGACCCAGTGACTCAGTAAAGGAAATATGGACCCAGCCACAACTCAGAGGGGAGAG
GTATGGCTCCCAGAAAGGACTGATAATCCTTACCAGTGCTGTGACGGCTGGGGCTGCTGAGGAGTTTGTCTTCATAATG
AAGAGGTTGGGCAGAGCTCTGATCATTGGAGAACAGACCAGTGGTGGGTCCCATTCCCCACAGACGTACCANGTTGATG
A
CitationBradford RL, Wang C, Zack DJ, Adler R. Roles of cell-intrinsic and microenvironmental factors in photoreceptor cell differentiation. Dev Biol. 2005 Oct 1;286(1):31-45.
CopyrightCopyright © 2005 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (AF121968) using the accession provided by the authors.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 26
Retina
Photoreceptor layer
31-44
stage 34
stage 38
stage 44
stage 44
Retina
Photoreceptor layer
outer nuclear layer

Entry 2

GEISHA IdIRBP.Stenkamp.2005Data SourcePublication
Complete cDNA Template Probeshow
ATGAGAACATATTTCTTTCTGTTTTCTGTTCTGATCGTGTGCAGCATATCTGCTGAGGAAATCTTTCAGCCAACCCTTG
TGCTGGACATGGCTAAAGTACTACTGGATAACTACTGCTATCCTGAAAACCTAGTGGGAATGCAAGAAGCCATTGAGCA
AGCCATCAAGAGTGGGGAGATCCTGGACATTTCTGATCCAAAAATGCTGGCCAATGTCTTGACAGCTGGAGTGCAGGGT
GCTCTGAATGATCCAAGACTGGTAATCTCCTATGAGCCATCACTTCATGCAGCTCCTAAACAAGAAGCTGAAACTTACC
CTACTCGGGAACAACTCCTGAGTCTTATTGAACATGTAGTCATATATGACAAGCTGGAGGGAAATGTTGGCTACCTGAG
GATTGATTATATCATAGGACAGGAAGTTGTGGAGAAAGTTGGAGCTTTTCTGGTGGACAAGGTATGGAAGACATTGATA
AATACATCTGCCTTGGTGATAGATCTTCGTTACAGCACTGGAGGACAGATCTCTGGAATTCCCTTCATTATCTCATATT
TGCACGAAGCAGACAAGATGCTACATGTTGAAACTGTATACAATCGGCCTTCCAACACCACTACAGAGATATGGACATT
GCCAAAAGTGTTGGGAGAGAGATACAGCAAAGACAAAGATGTCATTGTTCTGATCAGTCATCACACCACAGGAGTGGCT
GAAGATGTGGCTTACATCCTGAAGCATATGAACAGAGCTATCACTCTTGGGGAGAAGACAGCTGGGGGCTCGCTGGACA
TCCAGAAGCTACGTATTGGTCCCTCTAATTTCTATATGATGGTTCCTGTGTCGCGATCTGTCAGCCCCTTGAGTGGGGG
TGGACAGAGCTGGGAGGTGAGTGGGGTGATGCCATGTGTGGCTTCTGAGGCAGAGCAAGCCTTGAAGAAATCCTTGGAC
ATCCTGGCAGTGCGCAGAGCAGTGCCTGGCACCCTAAGTCGCCTCACAGACATACTAAAGGACTATTACAGCTTAGTGG
AGCGAGTGCCAGTGCTGCTGAGGCACCTCACTACCTCTGACTTCTCTTCTGTGCAGTCAGCGGAGGACCTGGCCACCAA
GCTCAACACTGAGATGCAGACCTTGTCTGAGGACCCTCGCCTGTTGGTCCGCACCATGATGCCTGGTGAAGCTGCTGCC
CCTCCTGCTGAGATGCCAATTGCAATGGCAGCCAATTTGCCTGATAATGAGCAATTGCTGCATGCCTTGGTGGATACTG
TCTTCAAGGTGTCAGTGTTGCCAGGCAATGTGGGCTACATGCGCTTTGATGAGTTTGCTGATGCCTCTGTTCTTGTTAA
GCTGGGACCTTACATTGTAAAAAAAGTCTGGGAGCCCCTACAAAATACAGAGAACCTGATCATGGACCTACGTTACAAC
CCTGGTGGCCCTTCCTCCTCTGCTGTGCCTATGTTGATCTCTTACTTCCAAGATCCTACTGCTGGCCCTGTCCATCTCT
TCACAACCTACGACAGGCGTACCAACCATACACAAGAGCATAACAGCCAGGCAGAACTGCTGGCCCAGCCCTACGGAGC
TCAGCGTGGCATCTATGTACTCACCAGCCGCCACACTGCTACAGCTGCTGAGGAGTTTGCTTACCTCATGCAATCACTT
GGCCGTGCCACGCTGATTGGTGAGATCACAGCAGGTAGCCTCTCACATACCTGTACCTTCCCTCTCGTGCAGCCTGAGC
AAGGAATAACTCGTGGCCTAACCATCACGGTCCCAGTTATCACCTTCATTGACAACCATGGGGAAAGCTGGATGGGTGG
AGGTGTTGTGCCTGATGCCATAGTGTTGGCAGAGGATGCACTGGAGAAGGCGGAAGAGGTGCTAACTTTTCACAGGAAA
ATGGGGATACTTTTGGAGAGTACTGGGCAGCTTCTAGAGGCTCACTATGCCATCCCAGAAGTGGCTGAAAAGGCCAGTG
TTATGCTCAGCACCAAACGAGTTCAAGGAGGTTATCGATCAGCTGTAGACTTTGAGACGTTGGCTTCCCAGCTTACCAG
TGACTTGCAGGAGGCATCAGGGGATCATCGGCTTCATGTTTTCCACAGCCATGTGGAACCAACACCAGAAGAACAGCTT
CCCAACATGATTCCCAGCCCTGAGGAACTCAGCTATATCATTGAGGCACTCTTCAAAATCGAGGTATTGCCAGGCAACC
TGGGATACCTTCGCTTTGATATGATGGCTGAGGCAGAAACTGTAAAAGCAATTGGACCTCAGCTGGTGCAGATGGTCTG
GAACAAGCTGGTTGACACAGATGCCATGATTATTGACATGAGATATAATACAGGTGGCTACTCTACTGCTGTCCCAATA
CTTTGTTCCTATTTCTTTGAGCCTGAACCTCGTCAACACCTCTACACTGTCTTTGATCGTAGTACCTCCCGCAGCACAG
AGGTGTGGACTCTCCCCAAGGTTACTGGCAAGAGATATGGCTCCCTCAAGGACATCTACATCCTAACAAGCCATATGAG
TGGCTCAGCAGCTGAAGCTTTCACTCGCTCTATGAAGGATCTACACCGTGCCACAGTTATTGGTGAGCCCACAGTAGGT
GGTTCCCTCTCAGTGGGTATATACCGAGTTGGCAACAGCTCCTTATATCGTTCCATCCCTAGCCAAGTGGTGCTCAGCC
CAGTCACTGGCAAAGTATGGAGTGTGTCTGGAGCAGAGCCACATATCACCATCCAAGCCAGCGAAGCCTTGGCTGCAGC
TAAGCACATTGCCAGCCTGCGTACCCAGGTGCCACAGATAGTGCAAACTGTAGGTAAGCTTGTGGCAGAAAATTATGCT
TTTGTAGACATTGGGACTGATATTGCATCCAACCTCACCAAGAGTGTCAACAAAGAAAATTACAAAAGGATTAATTCAG
AAAAGGAGCTGGCCAGGAAGTTGACTGCAATCTTGCAAGCTCTTTCTGATGATGAACACTTGAAAATACTCTACATCCC
TGAACATGCCAAAGACAGCATTCCAGGGATTTTGCCAAAACAGATCCCTTCCCCAGAAGTTTTTGAAGATCTGATTAAA
TTTTCATTCCACACAAACGTATTTGAAAACAACATCGGCTATCTGAGATTTGATATGTTTGGAGACTGTGAACTTCTAA
CCCAGGTGTCTGATCTACTGGTAGAGCATGTTTGGAAGAAAATTGTTCACACAGATGCATTAATCATAGACATGAGGTA
CAATATTGGAGGTTACACCAATTCCATACCAATCTTATGCTCATATTTCTTCGATGAAGGACATCAAGTTCTACTGGAC
AAAGTTTATGACAGACCCAGTGACTCAGTAAAGGAAATATGGACCCAGCCACAACTCAGAGGGGAGAGGTATGGCTCCC
AGAAAGGACTGATAATCCTTACCAGTGCTGTGACGGCTGGGGCTGCTGAGGAGTTTGTCTTCATAATGAAGAGGTTGGG
CAGAGCTCTGATCATTGGAGAACAGACCAGTGGTGGGTCCCATTCCCCACAGACATACCAAGTAGATGATACCAACTTC
TACATCATCATCCCCACTGCACGATCAGTCATCTCTGCAGAGAGCGCTTCTTGGGAAGGGAAAGGGGTGCCCCCTCACA
TGGAAACACCAGCGGTAACAGCCCTCATCAAAGCAAAGGAGGTGCTCAGTGCTCATCTGCACAGCTCAAGATAGCCCAA
CAGGGACATGTGCTTC
CitationStenkamp DL, Calderwood JL, Van Niel EE, Daniels LM, Gonzalez-Fernandez F. The interphotoreceptor retinoid-binding protein (IRBP) of the chicken (Gallus gallus domesticus). Mol Vis. 2005 Sep 30;11:833-45.
Copyright©2005 Molecular Vision
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # AY994153).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-44
stage 44
stage 44
stage 44
stage 44
stage 44
stage 44
stage 44
stage 44
Eye
Retina
STAGE 44+
STAGE44+
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.297

Mouse

Emage
EurexpressMGI:97878
MGI GXDMGI:97878

Frog

Xenbase1008798

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070301-4, ZDB-GENE-990415-132
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