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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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OLFM1
olfactomedin 1

Gene

Official Symbol	OLFM1
Official Full Name	olfactomedin 1
CGNC ID	1803
also known as	NOELIN-1, olfactomedin-1, noelin\|neuronal olfactomedin-related ER localized protein\|pancortin
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_204767
Polypeptide	NP_990098
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.3402

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	10439	ENSG00000130558		MIM:605366
Mouse	56177	ENSMUSG00000026833	All phenotypic alleles (5):Targeted, knock-out(1) Targeted, other(4)	MGI:1860437
Xenopus	100101729, 398287			491790
Zebrafish	445092, 436764	ENSDARG00000014053	ZDB-GENE-040801-228, ZDB-GENE-040718-194	ZFIN:ZDB-GENE-040801-228, ZFIN:ZDB-GENE-040718-194

Gene Ontology

Molecular Function
Biological Process	multicellular organismal development
Cellular Component	cell junction, extracellular region, synapse

Links to other databases

Entrez Gene	395535
Ensembl Gene	ENSGALG00000002515
KEGG	gga:395535

Entry 1

GEISHA Id	OLFM1.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	GCAACATCGTCATCAGCAAGC
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGCCCACACAGAAGAGAGCGAATC	cDNA Template Length	727
Forward cDNA Template Probe	show GGTAAATTCCACAGTCATTGCCTTACTTCTTTTGTATGCGCTATAGGTTTGCTATCGGAACCGAAACCCTTCCAAACCC CCAACTGGAATGGTTCCCCCGGGGCAATTCCCACCGCAAATATATGGGTAGGTGTGAATCCCTAAACCCGGGGCCAAAT TTTAAAAAAGGAAAAGTTAAGGCTAACTGTCCAGGCCATGCCTAAAAACCCCCCCTGGCCGTTGGCCTAAATTTTGCAA CCGGTTGGTTATTTTCCTCTTTTAAATGGGGTTCCCCCAGAATAAGAATTGGTTCCTAATTGGTTCCCCCCTTTTTCCC CCTTTTTTCCTTGGTTTTCCACAACCGTTTTTTAACAAGGGAAGGGATACCACTCCTCCGAACCCCTGAACTGGAAAAA GGGGGCATTTTTAAATATTTGGTGGCCCCTGTTTCCTGGGTAAAAGGGCCCACCCCTTGGGGTGTTGTCCCCCCAGGAA AAAGTTGGAATAATTTTTTTTTAACCGGAAGTTCATCTTACTTCTTCGGTGTAGCCTTTGTTTTGTTAGCCTAATGGCA CCTTCTTGGCCCCCCCAAAAAAACCTTTTTTTGATTAAAACAATGCCCACAATAATAAAGACTCCCCCCCCCCGCCTTT TTCAGGAAACAGGGTTTCCCGGCTGGAAGGCCCCCCCCCGGGGGTTGGGGGCCCCCCCTCTGGTGAACAAAATTAAAAA AAC
Comments	No expression observed at or before stage 4.

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 5

stage 6

Neural Plate/Tube
Paraxial Mesoderm
Unlabeled

Stages 3-4.

7-12

stage 7

stage 8

stage 9

stage 10

stage 12

Anterior Neuropore
Hindbrain
Neural Crest
Neural Plate/Tube
Paraxial Mesoderm
Somites

Dorsal view.

13-18

stage 13

stage 17

Ear/Otic Placode
Neural Crest
Neural Plate/Tube
Paraxial Mesoderm
Somites
Spinal Cord
Spinal Ganglia and Nerves

Dorsal view.
Ventral view.

19-24

stage 19

stage 22

stage 23

Head Mesenchyme
Paraxial Mesoderm
Somites
Spinal Cord
Spinal Ganglia and Nerves

stage 25

Head Mesenchyme
Hindbrain
Spinal Cord
Spinal Ganglia and Nerves

Entry 2

GEISHA Id	Noelin-1.Barembaum.2000	Data Source	Publication
Complete cDNA Template Probe	show CGTCCCCAGCGGCATGGAGCCCGGCGCCGGTGCAGAATGAAGGGTGCCTGGCGCCCCCCCCTGCAGACATGTCTGTGCC TTTACTCAAGATTGGAGTCGTCCTCAGCACCATGGCCATGATCACCAATTGGATGTCGCAGACGCTGCCCTCCCTCGTG GGGCTCAACACCACCAAACTCACGGCGGCCTCGGGCGGCACCTTGGATCGCAGCACGGGAGTGTTGCCTACCAACCCAG AGGAAAGCTGGCAGGTCTACAGCTCTGCCCAGGATAGCGAGGGACGTTGTATATGCACAGTGGTGGCACCTCAACAGAC GATGTGCTCGCGTGATGCCAGGACAAAGCAGCTGAGACAACTATTAGAAAAGGTGCAAAACATGTCTCAGTCAATAGAG GTGTTGGACAGGCGGACCCAGCGAGACCTACAGTACGTGGAGAAGATGGAAAACCAGATGAGAGGACTGGAATCCAAAT TTAAGCAAGTGGAAGAAAGCCACAAGCAGCACCTGGCGAGGCAGTTTAAGGCAATAAAAGCGAAAATGGAGGAACTTAG GCCTTTGATACCAGTGTTGGAAGAGTACAAAGCCGATGCCAAATTGGTATTGCAGTTTAAAGAGGAGGTCCAGAATCTG ACGTCAGTTCTAAACGAACTCCAGGAAGAGATTGGCGCCTATGACTACGAAGAGCTTCAGAACAGAGTGTCAAATCTTG AAGAAAGGCTTCGTGCATGCATGCAAAAATTAGCTTGTGGCAAGCTGACGGGAATAAGTGACCCAATCACAATTAAAAC CTCGGGGTCCCGCTTCGGCTCGTGGATGACGGACCCTCTCGCCCCAGAGGGAGAGAACAAGGTCTGGTACATGGACAGC TACCACAACAACCGCTTCGTCCGCGAATACAAATCCATGGCGGATTTCATGAACACCGACAATTTTACCTCTCACCGTC TCCCTCACCCGTGGTCAGGCACCGGTCAAGTGGTCTACAATGGTTCTATCTATTTCAATAAATACCAAAGCCACATAAT TATCAGGTTTGACTTGAAAACAGAGACCATTCTCAAGACTCGCAGCCTGGATTATGCTGGCTACAACAACATGTACCAC TACGCCTGGGGGGG
Citation	Barembaum, M., Moreno, T., LaBonne, C. et al. Noelin-1 is a secreted glycoprotein involved in generation of the neural crest. Nat Cell Biol 2, 219–225 (2000).
Copyright	Copyright © 2000, Springer Nature.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (accession NM_204767.1).